EMLSAT00000011093, EMLSAT00000011093-706940 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011093
Unique Name	EMLSAT00000011093-706940
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s751	supercontig	LSalAtl2s751:302063..306277 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011093 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011093	EMLSAG00000011093-693859	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000049602	EMLSAE00000049602-758530	Lepeophtheirus salmonis	exon
EMLSAE00000049603	EMLSAE00000049603-758531	Lepeophtheirus salmonis	exon
EMLSAE00000049604	EMLSAE00000049604-758532	Lepeophtheirus salmonis	exon
EMLSAE00000049605	EMLSAE00000049605-758533	Lepeophtheirus salmonis	exon
EMLSAE00000049606	EMLSAE00000049606-758534	Lepeophtheirus salmonis	exon
EMLSAE00000049607	EMLSAE00000049607-758535	Lepeophtheirus salmonis	exon
EMLSAE00000049608	EMLSAE00000049608-758536	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto776084	auto776084	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011093	EMLSAP00000011093	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s751:302063..306277+

protein sequence of EMLSAP00000011093

>EMLSAP00000011093 ID=EMLSAP00000011093|Name=EMLSAP00000011093|organism=Lepeophtheirus salmonis|type=polypeptide|length=496bp
MKTGTWYVCGFVVAFVYFYVYAVNYIRGVRGEDPALFNRRTNDLWNRRRT
QNNHQPVPPRLAFNYHNHTEMTNYLRHISTIYSNLTALYSIGQSVQGREL
WVMVVSRSPYEHMIGKPNVKYVANMHGNEAVGRELMLHLILYLVQQYESD
YYVRWLLDNTRIHIMPSMNPDGFEVASEGACEGGQGRYNARGFDINRNFP
DYFKHNNKRPQPETEAVKEWISKIQFVLSGNIHGGALVASYPFDNXPNSI
FSSLLSSPSLAPDNDVFKHLATTYSISHGRMYLGESCKFGAPKFSNGTTN
GAAWYPLTGGMQDYNYIWHGCMEITLELSCCKFPPSVELPQFWEDNRNSL
LRFIGEAHKGVKGFVKDESGSAIEGASMKVKGRDVGFQTTKEGEFWRILL
PGIYTMEIFAPGYQPREVQFAIVEQNPTLLNVTLFGEPLSIKLSHQGDTN
KSSDEKAGDSESSTEDSNTGLFGLPNPLTSIQTGVKSFFDKLPIIG

mRNA from alignment at LSalAtl2s751:302063..306277+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011093-706940 ID=EMLSAT00000011093-706940|Name=EMLSAT00000011093|organism=Lepeophtheirus salmonis|type=mRNA|length=4215bp|location=Sequence derived from alignment at LSalAtl2s751:302063..306277+ (Lepeophtheirus salmonis)
AAATACCTACTAATACTTAGATATTTTACCTACATGTGAGTCCATAAGAA
TTCCTTCTTCTTTCACTTTTATCCTTGTGACAGGCCCGTTTTCACTTCTC
CAGTCTCCTTGCTTGTCGACCATTTCACCAGGTAAATTTTTCCTTTACTA
ACATATACGTATTATGAATGCACCGTTATATATATTAATATACGTAATCT
CTCAATAGTTTCTATATATTCTCCCAATGATTTTAAAGACGCTTTCAGTT
TAAAGTAAAAATGAAGACGGGAACGTGGTACGTCTGTGGCTTTGTAGTGG
CATTTGTGTATTTCTATGTATACGCAGTCAATTATATCCGTGGAGTACGA
GGAGAGGATCCAGCTCTTTTTAATAGAAGAACTAATGATTTGTGGAACCG
ACGGCGGACTCAAAACAACCATCAACCAGTGCCTCCAAGACTTGCCTTTA
ATTATCATAACCACACTGAAATGACGAATTACTTAAGGCACATTTCTACG
ATATATTCCAATTTAACAGCTCTTTATTCTATCGGACAGTCGGTTCAAGG
AAGGGAACTATGGGTAATGGTAGTTTCACGATCTCCTTATGAGCATATGA
TAGGGAAGCCCAACGTAAAGTAATTTTAATTTACTAGAATATGTTTTCCG
TTTCATCATCTAAAAATATCCTTTTCGATATTAGATATGTCGCCAACATG
CACGGAAATGAAGCCGTGGGACGCGAACTAATGCTTCATCTCATTTTATA
TTTAGTTCAACAATATGAATCAGATTATTATGTTAGGTGGCTTCTTGATA
ATACGCGAATTCATATTATGCCATCTATGAATCCTGATGGATTCGAAGTA
GCAAGTGAAGGAGCTTGTGAGGGAGGACAAGGCAGGTAAGAATAGACGCC
ACTCTAATCATTGGAATTACTTATATTCATGTTTCATTTCTTTTTCAATC
TATTTCTTCAAGATATAATGCTAGAGGATTTGATATTAATAGAAACTTCC
CAGACTATTTTAAACACAACAACAAACGCCCTCAACCTGAAACTGAAGCT
GTAAAAGAATGGATTTCAAAAATACAATTTGTACTATCTGGAAATATTCA
TGGAGGAGCTCTGGTAGCTTCTTATCCGTTTGATAATMCCCCGAATTCTA
TTTTCAGTTCACTACTTAGCTCCCCTTCTTTAGCACCAGACAATGATGTA
TTTAAACATCTCGCCACAACTTACTCAATAAGTCACGGAAGAATGTACCT
GGGTATATGAGCACTTGAATTAATATAATTTCATAAAATTAGTACCATGA
AATTTTCAGGTGAATCTTGTAAGTTTGGAGCACCAAAGTTTAGTAATGGA
ACAACCAACGGTGCTGCTTGGTATCCTCTCACGGGTTAGTTATGCTGTTG
ATAATCATTCTAAATAAATTTACAAATTTTAACTGAATTATTTTTCTCAT
AGGTGGAATGCAAGACTATAATTACATCTGGCATGGATGCATGGAAATTA
CTTTGGAGCTCTCATGCTGTAAATTTCCTCCCTCTGTCGAATTACCTCAA
TTTTGGGAAGATAATCGTAATTCACTATTGAGATTTATAGGCGAAGCACA
TAAGGGAGTAAAAGGCTTCGTTAAAGATGAATCGGGATCTGCTATTGAAG
GTGCTTCTATGAAAGTTAAAGGAAGAGATGTCGGTTTTCAAACTACTAAA
GAAGGAGAATTTTGGAGGATATTACTACCTGGAATATATACAATGGAAAT
ATTTGCTCCTGGGTATCAACCGCGAGAGGTTCAATTTGCCATTGTTGAAC
AGAATCCAACTCTGTTAAATGTTACTCTATTCGGTGAACCACTATCAATC
AAATTATCTCATCAAGGAGATACTAATAAATCATCTGATGAAAAGGCAGG
AGACTCAGAGAGTTCCACTGAAGACTCAAATACTGGACTTTTTGGCTTAC
CCAATCCTTTAACAAGCATACAAACTGGAGTTAAATCCTTTTTCGATAAA
CTTCCCATAATAGGTTGATACATTTTGATTTGGACATTATATATATTTAT
ATGTTAAGTCTATATAAATATGTTTAATATATTATGTACCTCTTATTTTA
TCTTAGGGCACTCAATTAATTGTCAAACAATTTTAAATCAGTATTATGAA
ACATCCTATTATGGTTGTAGCTTTGTTTTTTGAAGCTATCTTCATTCATT
CAGAGTATTTAAATTAAAAATGTAATACTGGTCAACAAATACCTATGTAT
ATATAGTTTAAAACCATAAATAAATTTAAAAGTTAATTTTATATTTCAAT
AGGTCATACATCAATTAATTAGTACATAGAAATATCATTACAATTTCTTT
TTTTTCTTCTTCTTGAGGGATAGTGTGCAAAGATCCTTTACAACGTCAAT
CACGTCTTTGGCATAAGACTCGATATCCACATTTTTAATGTCTTGTAAGC
TACCGTCCTTTCCATTACATTCTGATGTAATACTATAGAATATATATAAA
GAGAGTAATTAATTCCATCACAAAAACAGTCAGTTGTTTTTAGGTATAAA
ATGACTTCTTACTTTCCCAACAATCCCGTCAAAAATGGTGCTTTGTATTT
TTTCCCTCGTCCAACAGATAGGATGGTCCAAACAGCACCTCCACTGAGAT
CCTTGCAGTTATGATTTGAGTATGATTTCATATTTTTCTTGATGTCTTCA
AAGATCTTCATTTGTCCAAAAGATGTACTACTGTCTTCTACGTATTTATG
ATTGTCATCTTCCTCTAAGGNAAAAACGAAGCATTACATTTTATAGAGAT
AAATTTGGAATAGAATAGAAAAAATATTAATAATAATATGAATCTTGATT
TTACTCATGGTAATCGAATTTCCTTCAAATAAAATATCCATTACACAAAT
ATTTTTTTTTTCATCACCACAATTATCTTTATTCTGTACTGTATTCGCTA
TCCCTTCTACAATGGGATATTTGGGAGTATTCAATTCAGATAAAAACTCA
CAATTGCGTGAACAGTAGCTACGAGAGAAATTAACAGAATATCATAAGTT
TGCAACATGGGATTCTGAATTTAATATAATTAAATATTAATACTCACCCC
CAATCCTCACAATTGTTTGGAAGCCCGGATGAACATGTATAACACCATTT
ATCAAGACTTTGAACATCCGGATATTTTTCATACTTTTTCTTAATGTCAA
ATTTGGGATCTGGGCAAACGGCACCATCATCATAATTCACAATAAATTTG
TCCTGATTTAATTTGGTAAATTCAATTTATACATTTATGTACAGTATAGG
TACTTATTTAATTAGTAGGAATTACCTTGATTGTATTAGCATCCTTCACA
CTATTTTTATTGATATCACATGTTGAGTTTACTTTTTTGATTTTTTTCAT
AGGGTCACCATCCTGGCATTTTTCACTTCCTTTATCGAAAAGACATGCTG
CAAATGGTTTCATACCAAGTCCATTGGTTGCACATGTTTTCTCAAGTGGA
ACCCTTTGGATTCCAGTATAATGATAGTTCAGATCATCCCTTTCACAGTC
CAGTTTCCCAGTCTTGATTTTACAGTTGGCAGACACAACTTTTTTTGCTT
TAAACATATCCGGTGTTGGAAAGCAAATCGATTTATGGTTGGAATCTTTG
GAAAAGTCGTCATCTTTTTTTAATTTTAAGAGTCCAACATCATCTTGAAA
ATTGGACGTTTTAAAATTCTTATGGATGTAAAGTTTTTCTATTGTCAACT
TTTTGTCTTCAGAATACGTTGGTATTATTACTGAGAGTTTAGTTGGGTCT
TTTGAATAAAAATTTCCCATGGGTCCATCAGTACTTTTTAAAGGACAAAA
TCCCTTCATAAGATTGCACATACAGCTTGCAGATGTGATCAGAAACGTTG
GACTTNNNNNNNNNNNNNATGGAGGCTGAGCATGATTTCGTATCACCAGC
AGTTGCTGTATCTTCATTTTGTACTAATCCTATCCAGGCTCTATTTTTTC
CAGTCAAATCGGAATAGACACAGGGACATCTTTTGGTAGTTTTTTTTAGC
AATTTCTGATATTCACTTCTTGTAAAAATGGGATGATGTATTTCTGGTAA
TGATGATCCATTTTGCATGATAACTCTTACATAATGACACCCTGGTGTTG
TTGGTATAATGCAAAAAACAATAAATATTACAGATATTATAGGATAAAAC
TTTTTTAAATCTTTG

Add to Basket

Search form