EMLSAT00000011144, EMLSAT00000011144-706991 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011144
Unique NameEMLSAT00000011144-706991
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s757supercontigLSalAtl2s757:42372..43082 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011144 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011144EMLSAG00000011144-693910Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049838EMLSAE00000049838-758766Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770398auto770398Lepeophtheirus salmonispolypeptide
EMLSAP00000011144EMLSAP00000011144Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011144

>EMLSAP00000011144 ID=EMLSAP00000011144|Name=EMLSAP00000011144|organism=Lepeophtheirus salmonis|type=polypeptide|length=236bp
MGCGSVFKYVVFLAHFVFFCLGIALISIGAYLGNRMESYFDFEGNSYFAG
SFVIIGIGIVILIISFFGCCGMCMENACLMRTLGFLLFLLILTEIGVVVS
YLFYKDTFQDVIVENMIGDMDKYNKPDFEQVTKEWNHLQIDFACCGTNDY
KEWFNSSYARIPDSCCKTVSDQCAKDITIDSDPSAINTEGCIKEXNRIIS
DNQSSVIGVGVGLLLFELLGIIIACCYGNNFSDSYV
back to top

mRNA from alignment at LSalAtl2s757:42372..43082-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011144-706991 ID=EMLSAT00000011144-706991|Name=EMLSAT00000011144|organism=Lepeophtheirus salmonis|type=mRNA|length=711bp|location=Sequence derived from alignment at LSalAtl2s757:42372..43082- (Lepeophtheirus salmonis)
ATGGGCTGCGGAAGTGTTTTTAAGTACGTGGTGTTCCTGGCACACTTTGT
CTTTTTCTGCCTTGGCATTGCTCTAATCTCCATCGGAGCCTATTTGGGGA
ATCGTATGGAGAGTTACTTTGATTTTGAGGGTAATTCCTACTTTGCTGGA
TCCTTTGTCATCATTGGTATTGGCATTGTCATACTCATAATCTCCTTCTT
TGGATGTTGTGGTATGTGTATGGAGAACGCCTGCCTCATGCGAACCCTTG
GATTCCTCCTTTTCCTTCTCATCCTGACGGAAATCGGAGTTGTTGTGTCT
TATCTCTTTTACAAGGACACATTCCAAGACGTCATTGTCGAAAATATGAT
TGGAGACATGGATAAATATAACAAACCCGACTTTGAGCAAGTAACCAAGG
AATGGAATCATTTGCAAATTGACTTTGCTTGCTGTGGTACCAATGACTAC
AAAGAATGGTTCAATTCCTCTTACGCCAGAATACCTGACTCCTGTTGTAA
AACAGTTTCTGATCAATGTGCAAAGGATATCACAATAGATTCGGATCCCT
CGGCTATCAATACTGAAGGCTGTATCAAAGAGMTCAATCGTATCATTAGT
GACAATCAAAGTAGTGTCATTGGTGTTGGAGTCGGACTTCTCTTATTCGA
GCTCCTTGGCATCATTATTGCCTGTTGCTACGGAAATAATTTCTCTGATA
GTTATGTATAA
back to top
Add to Basket