|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s760 | supercontig | LSalAtl2s760:470421..474651 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011189 >EMLSAP00000011189 ID=EMLSAP00000011189|Name=EMLSAP00000011189|organism=Lepeophtheirus salmonis|type=polypeptide|length=808bp
MSRSQNGSGSYGRGGGGTRFNSGGRYGDRGGQSRFGSDRGGSFGGDRNGG
MNKGKNPGQNLRKPVWESYDLVPFEKHFYNPHPNILNAEKKTVEAYRDEK
EITIVRGHNIPNPILDFTEAGFPDYILKEFKRQGFERPTAIQSQGWPIAL
SGSNMVGIAMTGSGKTCGYLLPGIIHVNNQPYLEEGDGPIVLVLAPTREL
AQQIQEVASEFGRTSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLI
DILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWS
ATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKL
ARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKE
RDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRI
GRTGRKDRTGTAYTLFTSGNSAKAKDLVDVLLEAKQVVNPKLQELAQCSG
FNRRAAGGRGGRYSGXSRYGGGGGGSRXGGGGDRNGGXRYGGNSNSGSRF
NGGARYGGSGGPPRTGGDRPQHLGENTVRCIAMDGTEGLVRGQKVLDTGS
PIKIPVGEETLGRIINVIGDPIDERGPVNSKSKASIHAEAPPFSEMSVQQ
EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGY
SVFAGVGERTREGNDLYHEMIEGGVISLKDKSSKVALVYGQMNEPPGARA
RVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVG
YXPTLATD back to topmRNA from alignment at LSalAtl2s760:470421..474651+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011189-707036 ID=EMLSAT00000011189-707036|Name=EMLSAT00000011189|organism=Lepeophtheirus salmonis|type=mRNA|length=4231bp|location=Sequence derived from alignment at LSalAtl2s760:470421..474651+ (Lepeophtheirus salmonis)
ACCCTTTAAGATAGTAATTAAGATGTCGCGTTCTCAAAATGGTAGTGGAT
CCTATGGTCGAGGTGGTGGTGGAACCCGCTTTAATTCTGGAGGTCGATAC
GGTGACCGTGGTGGGCAAAGTCGATTTGGAAGTGATAGAGGAGGCAGYTT
TGGAGGAGATCGCAATGGCGGAATGAACAAAGGAAAGAACCCTGGACAGA
ATTTGAGAAAACCCGTCTGGGAATCTTACGATTTAGTTCCCTTTGAGAAG
CATTTCTATAATCCTCATCCCAATATACTTAATGCTGAAAAGAAGACAGT
GGAGGCTTATAGAGACGAAAAGGAGATCACTATTGTTAGAGGACACAATA
TTCCCAATCCTATATTAGATTTCACAGAAGCAGGATTCCCAGACTATATT
TTAAAAGAATTCAAGAGGCAGGGGTTTGAGCGTCCTACTGCTATTCAATC
ACAAGGATGGCCTATTGCCCTATCTGGTTCTAATATGGTTGGTATTGCGA
TGACAGGTTCAGGAAAAACTTGTGGTTATCTTCTGCCTGGAATTATTCAT
GTCAATAATCAGCCTTATCTTGAAGAGGGAGATGGTCCTATTGTTTTGGT
TCTTGCACCAACTCGTGAATTGGCTCAGCAAATTCAAGAAGTCGCTAGTG
AATTCGGAAGAACTTCTCGTATTAAGAGTACATGTATTTTTGGAGGTGCT
CCCAAGGGGCCTCAACTCAGGGATTTAGAGCGTGGCTGTGAAATCGTCAT
CGCTACCCCTGGGCGTCTAATTGATATCTTGGAGATGGGTAAAATTAATA
TGCGACGTTGCACATATTTAGTTCTTGACGAGGCTGATAGGATGTTGGAT
ATGGGATTTGAACCTCAAATTCGTAAAATTATTGAACAAATTCGCCCAGA
CAGACAAGTGTTGATGTGGTCAGCTACTTGGCCTAAAGAAGTGAGACGCC
TGGCTGAAGACTTTCTTGATGATTATGTTCACATAAACATAGGAGCAGCT
ACGCTCCATGCAAACCACAACATTCTTCAAATCGTAGATGTATGCGAGGA
TTTCCAGAAAGAGGAGAAATTGGCTCGTCTTTTGGAGGAAATAGGMTGTG
AACCACATAATAAGATTCTTATATTTGTTGAGACCAAAAGAAAGGCTGAT
GAATTGACGCGTTTGATGCGACGTGATGGTTATCCCGCTATGTGTATTCA
TGGTGACAAGCAACAGAAAGAAAGAGACTGGGTTTTGGGGGAATTTAAAC
ACGGTGCAACTACAATACTTMTAGCCACTGATGTTGCAGCTCGTGGACTA
GATGTTGATGACGTTAAATTTGTTATTAATTATGACTATCCAAATAATTC
TGAAGACTATATTCATCGAATCGGAAGAACTGGTAGAAAAGATAGAACTG
GTACTGCCTATACTTTATTCACATCTGGCAACAGTGCAAAGGCTAAGGAT
CTAGTCGATGTTTTATTGGAAGCTAAGCAAGTAGTAAATCCTAAATTACA
AGAACTTGCCCAATGTAGCGGGTTTAATCGTCGTGCTGCTGGTGGTAGAG
GMGGMCGATATAGCGGGYGCTCTCGTTATGGTGGGGGCGGMGGAGGCTCA
CGGMACGGTGGTGGTGGMGATCGMAATGGTGGGMCACGCTACGGTGGTAA
CAGTAATAGTGGATCTAGGTTTAATGGAGGTGCAAGATATGGTGGMAGTG
GAGGTCCTCCAAGGACAGGAGGGGATCGCCGTTGGTGAATTTTAAGTACC
AAAGACTAGGGATATTTATAATTGGGCTCTTTACCTTGCTATCCCATTCC
TCTAAGTCCTATATTCAATTACTGGAACATTGAATGTTTGAGAAATGGTT
ATTAAAGCATTTTTTGTCTCAAATTTTTCATTCTGTATATTTTTCCCCTA
TGTGTTTAGAGGGAGGAAAGAAATCTATTTTTTTTTGTTTTCTAATCAAT
ATTATTCATGTAATATTTTTGTATGTAATGTATTATCCCTCGTATTATCT
CAGAGAAAGATTATTACTTTTTGTAATCTAGTTTTAATTCTCAAGTTCAA
AAAGGTAGAATATATATGGAACTAAATATTTTTTAATTCCTTATGCATTT
TCTAAAATTTATTCAATAAATTATAATATTTAACTGACGTTAAGTAGTAT
TTTTATTTCTTCATTTGGTTATCTGATGGGTGGAACTTTGCTAATGGACA
TCGGTCAAATACTATTAAAAAGTAATAATTATCAGTTTTCACTAAATTAT
GTAGATGGTGATCATTAAAATACCGATGTAGTGTTTCCTGCTCGTAAATT
ACAAGTAGTATGATGAGAAGAAAGGGAATTTTTATATAGGTGAGCTAAAG
ATGTATTTAAATTAAATCCATTATTGTTAACGTCATAATATATATACTTA
ATTAGTTAATAAACTTATATCCTAAATAATGTATGATTAACTTTAAAAAA
TATNATAAATAGCCTAATAAGAAGTCTGACTTAAAAAAAAGGACTCGATT
GAATCAAATATATATTAAATTTAGTAATGTTCCCTGATTTTTTAAATATA
AATTGAAGAACCAACATATATAATATTAATACTGAATCTTACGAGAAAGA
AATGTACTTTTTTATCTATGATACAAAACATATGTTTTCAGATATTATAC
TTCACTAAACCTATTGGGCATATTTAATTTTATCAATATAATCAAGGTAT
AATGAAATTAATGATAGCCTTAACGTAAAACCTATTTTGCTTTTGTTTAA
AAAAAATAAAATGAATATACAGTTTTTTTAATGATTTCTTGTAAGTTGTA
TTCCTAAATTCAATATCCGTCATTACGATTATGTAAATTAAGATACTTCG
AGACTAAGTATCTTGAAGTAAATAACATGTATAATATCTGAATAATGAAC
GAAATGAGTAGATTTTACTTTTTAAGAGTTGATGGGTATTGATAAGAAGT
GGAGTAGGTTTGGGATGTCGAGGTTGAGTGTGTGAAAAGAGTCTGGMATG
TTGTATTGTTAATAATTGTATTTTTTTAGCCCTAGCTGTTTTATGGACGC
ACGCATATGGTAGAGAAAATGGCGATGAATCACGTGACCCCTGGCAGAAT
TGGAAGGCCTTGGAGGCGCAGGAAATCAATTTTTCAATGGAGAGAAACAG
CTGATAAAATGGCTAATTGTAGGACAGACAGCTGAACTTACTTTGAAAGA
GAGAGAGCTTCTTGCTTCGGGTTCAGTCTTGTAGTGAGTTTGATAGGAGT
AACATGATGACGAGCGTAGGATTGATGAATTCCCTTAATGTCGGTAGACG
GGTTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCCAAGC
TGATCCTGGAAGTAGCTCAACATTTGGGTGAGAACACAGTTCGTTGCATT
GCAATGGACGGAACGGAGGGKTTGGTCCGTGGGCAGAAGGTGTTGGACAC
GGGTTCTCCAATCAAGATCCCTGTGGGAGAAGAGACCTTGGGGCGTATTA
TCAACGTGATTGGCGACCCCATTGATGAGCGCGGTCCCGTCAACAGCAAG
AGCAAGGCTTCTATCCACGCCGAAGCTCCTCCCTTCTCTGAAATGAGCGT
CCAACAAGAAATTTTGGTAACTGGTATCAAGGTTGTGGATCTCTTGGCTC
CCTATGCCAAAGGAGGAAAGATTGGKCTTTTCGGGGGTGCCGGTGTAGGC
AAAACTGTCCTCATCATGGAACTGATCAACAATGTCGCCAAGGCTCATGG
TGGATACTCTGTCTTCGCTGGTGTTGGAGAGAGAACCCGCGAGGGAAATG
ATTTGTACCACGAGATGATTGAGGGAGGCGTCATTTCACTCAAGGACAAG
AGCTCCAAGGTGGCACTTGTCTACGGTCAAATGAACGAACCACCAGGTGC
CCGTGCTCGTGTTGCACTTACAGGACTCACTGTTGCCGAATATTTCCGTG
ACGTTGAAGGCCAGGACGTACTCTTGTTTATTGACAATATCTTCAGATTT
ACACAAGCTGGTTCTGAAGTCTCTGCTTTGTTGGGTAGAATCCCATCAGC
TGTAGGGTATCAMCCCACTTTGGCCACAGAC back to top
|
