EMLSAT00000011219, EMLSAT00000011219-707066 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011219
Unique NameEMLSAT00000011219-707066
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s769supercontigLSalAtl2s769:20521..24395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011219 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011219EMLSAG00000011219-693985Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050101EMLSAE00000050101-759029Lepeophtheirus salmonisexon
EMLSAE00000050102EMLSAE00000050102-759030Lepeophtheirus salmonisexon
EMLSAE00000050103EMLSAE00000050103-759031Lepeophtheirus salmonisexon
EMLSAE00000050104EMLSAE00000050104-759032Lepeophtheirus salmonisexon
EMLSAE00000050105EMLSAE00000050105-759033Lepeophtheirus salmonisexon
EMLSAE00000050106EMLSAE00000050106-759034Lepeophtheirus salmonisexon
EMLSAE00000050107EMLSAE00000050107-759035Lepeophtheirus salmonisexon
EMLSAE00000050108EMLSAE00000050108-759036Lepeophtheirus salmonisexon
EMLSAE00000050109EMLSAE00000050109-759037Lepeophtheirus salmonisexon
EMLSAE00000050110EMLSAE00000050110-759038Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769457auto769457Lepeophtheirus salmonispolypeptide
EMLSAP00000011219EMLSAP00000011219Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011219

>EMLSAP00000011219 ID=EMLSAP00000011219|Name=EMLSAP00000011219|organism=Lepeophtheirus salmonis|type=polypeptide|length=803bp
MKTAFIYLLTLTTKVFDKSLPWCSTRTYPNGTHIGGKGFWGHCSLDCPDD
SRVVFEENDDIPSFFEPCEATLTDGTNANGECLPLALCTTLSFKEENLNE
CTLPNGGDGLCCIDTPIRTDDTRLSIVLNSEAQNPPLKLPSLKVSLEDVD
NAIGLRFGPVSSQDFPEQSPEVSDIEGIIFGDEPTGTDDDELVDDPEGFH
LRFNAPVDRKAEEVDHIAVDFVDTANKVKEDNNLSDAEAGIGLRSFDIDS
SNEINNLCPWSPPPKCEPNXRYRXADGTCNNLKNPNMGRAKTPYQRILLP
EYSEGSLQLPRRSKVRNTELPSARDLSVQLTQSNDDIDPQFTVLVMQMGQ
FIDHDLTHTPNHGIRCCGPRGSFPDTFDGSKCFPIPISENDPFWKGKKRC
LSLARSLSAPGLKCELEFRQQMNQITHWLDASNIYRSTKEEMDHLRLFKE
GKLSISTQSGTQKVWIREHNRIASFLGKLNSQWSEEKLFQESRRIVTAEY
QHIILKEWLPSILGNEFMTTYGLWPLQNGHSTQYLDIDSRITNEFATAAF
RFGHSLIPSKFSMKTFSQGRSRSXATNLKDLFFKPHQIKSSEDIDGLIRG
MVSQEGSPWDNSFVKEITDHLFEGRPGTGGLDLVAINVQRSRDHGIPGYN
AYREICQFNKAKTFEDFSDVMGNSTIQKLKRIYQHVDDIDLFVGGFSEER
HKDSILGPVFKCILGDQFARLKLGDRYFYDLGIDKNIAFTNEQLNEIRKV
SMSRILCDNSDSITMIQPRAFRNMDRRNKLTSCSSSSIPFVGLSVFEDRG
TRG
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mRNA from alignment at LSalAtl2s769:20521..24395-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011219-707066 ID=EMLSAT00000011219-707066|Name=EMLSAT00000011219|organism=Lepeophtheirus salmonis|type=mRNA|length=3875bp|location=Sequence derived from alignment at LSalAtl2s769:20521..24395- (Lepeophtheirus salmonis)
ATGAAAACCGCTTTCATCTATTTACTAACGCTCACTACTAAAGTCTTTGA TAGTAACTCCGTATATGGAAATGTTGTTTTTAGCAACAAGGCAAGGAGTG GCAGAGTAGAAGAATGCAAAACAACGGATGGMATTCCCTGCGTTTTTCCG TTTGAGTATGGCGGSAAAACTTACAAAYGATGCACAGMGATAAATGATCC AGAGTCCCTTCCTTGGTGCTCCACACGAACATATCCAAATGGCACACATA TTGGAGGGAAAGGTTTTTGGGGGCATTGTTCATTGGACTGTCCAGACGAC TCTAGAGTTGTCTTTGAAGAAAACGATGATATCCCTTCCTTCTTTGAACC TTGTGAGGCGACTCTGACTGATGGAACCAATGCCAATGGAGAATGTCTTC CTCTTGCACTCTGTACTACTCTTTCCTTCAAAGAAGAAAATCTGAATGAA TGTACTCTTCCGAATGGTGGAGATGGTCTTTGCTGTATAGATACACCAAT TAGAACGGATGACACTCGTCTATCCATTGTCCTTAATTCTGAGGCTCAAA ATCCACCACTCAAATTACCTTCATTAAAAGTGTCTTTAGAGGATGTGGAT AATGCCATTGGTCTTAGATTTGGGCCAGTTTCTTCTCAAGACTTCCCTGA ACAATCTCCAGAGGTATCTGATATCGAGGGAATCATTTTTGGGGATGAGC CCACTGGAACGGATGATGATGAGTTGGTAGATGATCCAGAAGGATTTCAT TTAAGATTCAATGCTCCTGTTGATCGAAAAGCTGAAGAGGTGGATCATAT TGCTGTAGACTTTGTTGATACAGCAAATAAAGTCAAGGTATTTATTTTGT CTGGTTCTTTCTAACTTGTCTACATTAATTAATTAAAAAACTTTTTCATT TTAGGAAGATAATAACTTGTCTGATGCTGAAGCTGGAATAGGATTAAGAT CTTTTGACATAGACTCAAGCAATGAAATCAATAACCTATGTCCATGGAGT CCTCCTCCAAAGTGTGAGCCCAATGKAAGATACAGARCCGCCGATGGAAC TTGCAATAATCTTAAAAACCCAAATATGGGCCGTGCCAAAACTCCTTATC AGAGAATTCTTTTACCAGAATATAGTGGTGAGTATTTTTGTATTTCTTTA AAATTAAAGTGTTCAAAATATTCAATCCAAAATCTCAGAGGGATCCCTTC AATTACCACGTAGAAGCAAGGTACGAAACACGGAACTACCCTCTGCTAGA GATTTGAGTGTACAATTAACTCAATCTAATGATGATATTGATCCACAATT TACAGTCTTAGTTATGCAAATGGGACAGTTCATAGATCATGACTTGACTC ATACACCGAATCATGGAATTCGTTGTTGTGGCCCCAGAGGATCATTTCCC GGTAATTTTATTATCATACCTTAAATTCGAAAAAATAATGAACAATTATT TTTAAAGATACATTTGATGGCTCCAAATGTTTTCCTATTCCAATAAGTGA AAATGATCCATTTTGGAAAGGAAAGAAGCGTTGTTTAAGCTTAGCAAGAT CTCTATCCGCTCCAGGTCTCAAATGTGAATTAGAATTTAGACAACAGGTA ACCTATTCATCATACTATTTTCGGCTTGGATTTAATTATATTATGTATGT AGATGAACCAAATTACTCATTGGCTGGATGCATCGAATATCTATMGATCA ACAAAGGAAGAAATGGATCATTTAAGACTCTTTAAAGAGGGCAAACTCTC AATTTCTACCCAGTCGGGAACACAAAAGGGTAGTTTACCAAGTTGCTCAG CAGCCCCTGCCGGAGTCGGTATGTGCAGGGGTTGTAAATCGTGTTTCTTT GCAGGTATATCGCATACCGAGTGGTCAATTAAAATCTGAATACTTTGAAT TTTAAACTTCAACAAGTTTATAATTTATTAACTAACAATAGAATTTCATC AAAATTAATACTATAAATAGATTTGTGTCTGAGGTCTTTAAATCATAAAT TTAATCACCCTTAGTGGCAATAATGACTTCCAGGTGGTGGCAGAAGGTCT ARCATCCACAGCAGATATAGTCCTCTGTCAGTGCTGGCTGACAGTGGTTT TGAGACCCTTGTTGTTTAGATGACAGACACTGCAGGCCTTCCCCTCGACA TACATCCAAAAGTTGTAGTCAAGGGGTTATGCCTCAGCGCCGAAGGAGGC CCGAAAGTGTCAAAAATAGTTCAAAAGAACTCAAAAGAGTCTTGGAACGG AGGAGATGGTTTTTTTATTGCTGGTGTCAAAAATAGCCTCTCCCCCCTCT CATGGCTCTTTCCACCAACTTTTTTGATAGCTTTCTGGACAGTCTGGTAA TAAATCCCAAGATATCTTAAGGGTATTGGACGGGGCTATTTTCTTTAACT CTTATATATCCATTTATGCCCGTCTTTCTCGACTTGTACGTAAGCTAGCC AGCTCAGCCCTTTTATTTTTTACTAATTATTTATGCTTTAATATATCGGA ATATGAATTAATTTAAATCACTCAACCTAAATTAATTATTGAATTAGTAA GAGTTCAAATTTCAATTGACCATCCCGTATAGGAAGAAGGGATCATATAT AAATATTTAATAAAGGAGCTATTTTATAGGTGATATCAGAGCTAATGAAC AACACAATCTCATAGTAATGCACACAGTTTGGATCCGAGAGCACAATAGA ATTGCCTCATTTCTAGGGAAGTTAAATTCTCAATGGTCTGAAGAAAAGCT TTTCCAAGAGAGTCGTCGTATTGTTACGGCAGAGTATCAGCACATTATAC TCAAAGAATGGTTACCCAGTATTCTTGGCAATGAGTTTATGACTACATAT GGGCTTTGGCCGCTCCAAAACGGTCATTCAACTCAATATTTAGACATCGA TTCAAGAATCACAAATGAATTTGCAACAGCTGCCTTTCGATTCGGACACA GCCTCATTCCATCCAAATTTAGTATGAAAACTTTCTCACAGGGGAGATCA AGATCTSGAGCCACGAATCTAAAGGATTTATTTTTTAAGCCTCATCAAAT TAAGTCTTCAGGTAATGTCAATATATTTAATAGCTGCTATGTTACTTCAT ATTTGTCTTTATTGTATCAGAGGATATTGATGGATTAATTCGAGGAATGG TAAGTCAAGAAGGAAGCCCTTGGGACAATAGTTTCGTGAAAGAAATTACA GATCATTTATTTGAAGGAAGACCCGGAACAGGAGGTCTTGATCTCGTAGC AATCAATGTTCAAAGAAGTCGTGATCATGGAATTCCAGGTTAATATCCTT TTTCAATCTCGTTTTTTAGGGAAATACTAATCAAGTCTACCTACATTTCT AGGATATAATGCGTATAGAGAGATTTGTCAATTCAACAAGGCCAAAACTT TTGAGGACTTTTCAGATGTGATGGGCAATAGTACTATTCAAAAACTGAAA CGTATATATCAACACGTAGACGACATTGATCTATTCGTTGGAGGTTTCTC AGAAGAGAGACATAAGGACTCCATTTTGGGCCCTGTTTTCAAATGTATCT TGGGTGATCAGTTTGCAAGGTAAGGAAAATTGAAAAAAAAAAAAAAAAAA TTCATCCATAATCCATTTTTAGGCTAAAACTTGGAGACAGGTACTTTTAT GACTTGGGTATTGATAAAAATATTGCTTTTACTAATGAGCAACTAAATGA AATAAGAAAAGTGTCAATGTCTCGAATATTGTGTGATAATTCAGACTCTA TTACGATGATACAACCAAGGGCATTCCGTAATATGGATAGACGAAACAAA TTAACGTCCTGTTCATCATCTTCAATACCATTTGTTGGGTTGTCTGTGTT TGAAGATCGTGGAACCAGAGGATGA
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