EMLSAT00000011227, EMLSAT00000011227-707074 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011227
Unique NameEMLSAT00000011227-707074
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s76supercontigLSalAtl2s76:1085383..1086314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011227 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011227EMLSAG00000011227-693993Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050137EMLSAE00000050137-759065Lepeophtheirus salmonisexon
EMLSAE00000050138EMLSAE00000050138-759066Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780393auto780393Lepeophtheirus salmonispolypeptide
EMLSAP00000011227EMLSAP00000011227Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011227

>EMLSAP00000011227 ID=EMLSAP00000011227|Name=EMLSAP00000011227|organism=Lepeophtheirus salmonis|type=polypeptide|length=266bp
MAAVRYYVNLSFSGCGFLGMYHVGSAAAWTEEIAEGRIKIKNALGSSAGS
IIAVALLADIPSEILRSKFLRLASKAEALPGGAFHPKFDINSIFSRXLNE
XLPLDAHEIVSGKLHISITDPKTMKNVIVSQFSTREELIEALICSCYMPA
FSGYSLPTYCGKVYVDGGFSDNQPIMSDGSPTIKISPFAGKSQIGPQSSD
SRRKMMWKSGGEELEISKRNLKRFICAVSPAKDLEELYQDGYQHTLDFIN
SPEFADCLIKEIPDQV
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mRNA from alignment at LSalAtl2s76:1085383..1086314-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011227-707074 ID=EMLSAT00000011227-707074|Name=EMLSAT00000011227|organism=Lepeophtheirus salmonis|type=mRNA|length=932bp|location=Sequence derived from alignment at LSalAtl2s76:1085383..1086314- (Lepeophtheirus salmonis)
TTTTCCATGGCCGCTGTGAGATACTACGTGAATCTTAGTTTCTCCGGTTG
TGGATTCTTAGGAATGTATCATGTTGGAAGTGCTGCAGCGTGGACAGAAG
AAATCGCTGAAGGAAGAATTAAAATTAAGAATGCCCTTGGATCATCCGCT
GGATCCATTATCGCAGTAGCTCTTTTAGCTGACATTCCCTCTGAAATCCT
TCGATCTAAATTTTTAAGACTGGCATCTAAAGCAGAAGCACTTCCAGGAG
GTGCCTTTCATCCGAAATTTGACATCAATTCCATTTTCTCAAGGGTTATT
ACATACTTATTTATTATATTACCTTTAAATTGAAAAATATTGTACATTCT
ATTTTATGCCATATGTTATGAAGTGAAAGGATAATTCAGATTAAAATACA
TATTTGCCCAATTTATTAGYAACTAAATGAGKCCCTGCCGTTAGATGCAC
ATGAAATAGTGTCCGGAAAACTTCACATATCTATTACGGATCCCAAAACG
ATGAAAAATGTAATTGTAAGTCAATTTTCAACACGTGAGGAACTAATAGA
AGCTCTCATTTGTTCTTGCTATATGCCAGCTTTTTCTGGTTACTCCCTTC
CTACATATTGTGGAAAAGTATATGTTGACGGAGGTTTTAGTGATAATCAA
CCCATTATGTCGGATGGATCTCCAACAATTAAGATATCTCCCTTTGCAGG
CAAAAGTCAAATTGGACCTCAAAGTAGTGACTCTCGTAGAAAGATGATGT
GGAAATCTGGTGGAGAGGAACTAGAAATTTCTAAACGAAATCTTAAAAGA
TTTATTTGTGCAGTTTCGCCTGCAAAGGACCTAGAGGAATTATATCAAGA
TGGATATCAGCATACACTTGACTTTATTAACAGTCCAGAGTTTGCTGATT
GTCTCATTAAAGAGATTCCAGACCAAGTGTGA
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