EMLSAT00000011247, EMLSAT00000011247-707094 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011247
Unique Name	EMLSAT00000011247-707094
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s76	supercontig	LSalAtl2s76:490659..497217 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011247 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011247	EMLSAG00000011247-694013	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000050217	EMLSAE00000050217-759145	Lepeophtheirus salmonis	exon
EMLSAE00000050218	EMLSAE00000050218-759146	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778119	auto778119	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011247	EMLSAP00000011247	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s76:490659..497217+

protein sequence of EMLSAP00000011247

>EMLSAP00000011247 ID=EMLSAP00000011247|Name=EMLSAP00000011247|organism=Lepeophtheirus salmonis|type=polypeptide|length=202bp
MKVLLSLTLLFGISLGALDKGNNLNIKLYSETNLRGISKDIYSYEEDMQL
IGFNNKAKSAIVNGIWLLYEETNFNRGKYNKMVSYTWGKNNKINNLGGIN
GKVSSIRYSGVEDLNANTLNFYEGPGFMGIEQYVYKDAPKLRYDNFGKSI
IISGCKPWTLYEKANFAGKRICVYPASITSPCKPGFFETPTAFGNFGNKT
KY

mRNA from alignment at LSalAtl2s76:490659..497217+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011247-707094 ID=EMLSAT00000011247-707094|Name=EMLSAT00000011247|organism=Lepeophtheirus salmonis|type=mRNA|length=6559bp|location=Sequence derived from alignment at LSalAtl2s76:490659..497217+ (Lepeophtheirus salmonis)
ATGAAAGTACTTTTATCCTTAACTCTCCTCTTCGGAATTTCCCTTGGTGC
CCTGGACAAAGGAAATAACCTTAACATCAAACTCTATTCCGAAACGAATC
TACGAGGGATTTCAAAAGACATTTATAGCTATGAAGAGGATATGCAGCTC
ATTGGGTTCAATAACAAAGCAAAATCTGCAATAGTCAATGGGATCTGGCT
CTTGTATGAAGAAACTAATTTCAACAGAGGGAAATACAACAAAATGGTAT
CCTATACGTGGGGCAAAAATAATAAGATTAATAATTTGGGAGGAATCAAC
GGCAAAGTCTCATCTATTCGGTATTCGGGTGTAGAGGATCTTAATGCAAA
TACACTTAATTTTTACGAAGGACCCGGGTTTATGGGAATCGAGCAATATG
TTTATAAAGATGCTCCTAAGCTCAGATATGACAACTTTGGTAAATCCATC
ATCATCAGTGGATGCAAGCCATGGACTCTCTATGAGAAGGCAAACTTTGC
AGGGAAAAGGATTTGTGTATACCCAGCTTCTATAACATCCCCATGCAAAC
CTGGCTTCTTTGAAACACCCACAGCTTTCGGAAATTTTGGTAATGTAGTT
TCAAGTGCCAGACTTGGATGCTTCTCAAAGAGTTCATTTGTTGCCAAACC
ATTTATTGAAGGAGAATCAAAATCCATTCACCTCTTTGATAATTAATTTT
TATATACAAGTTAATAAAGAACAGAGTTTTTTTCAAATTATTCAAATTTG
CATTAAATATCAATAGGGGATTGTCCGTTTTAAAAAGATTGGGAAAAGTA
CCTTTTTATATATTATAATAAAAATATTTAATGCTCTATAGTTTAAAAAT
CCGTTGAGTCTATGTAACTGAGGATTTTTTTTGCTCAGAGCTACACGAGG
AGGAGTCTTTTTATATACTTTAGCATTTATTAGCGTAAGAGTCTTTTATA
TTATCGCCTCCACTTTAATGTTATTTTATCCTCTCATTGTAAATGAGCCA
ATCCATTTCCTTTGAGACTGATGCAACATATAATGGCAATGATACTCTCT
ACCGTAGATATTATTGGTCTCACTCGATCACGATAATAAAAGAAGTTGAA
TTCCACAGCTTATTTGGAGAAAAGAACGTTAATAGTTTGTTTGATTTGTC
TTCTTGGTATATATGGGGATGTCGCAAACCACAACAAATAAGTACATGGG
GCTTAGGTGCAGTGAGCTTTGAGGCCAAACACAAAGTCCATCAAAGAAAA
AAAAAGTATATATAAAAAGAGACCAACAAACCAACATTTCCTTTATAATG
TGGCATGTATCAGAGTCGTAATCACCTTCAGACTCTTCCAGCTCTTCTTG
AATCTCGGGATAAAGGACATGCCCATGTTTCAGAAGTTTGCAAGCTTAAT
CTTGACTAGTCCGCCGCGGATCGCAACAAGGACATTCTCCCTATCCCACG
ACTGTGGAATAAATACTTTATTAATTGATGCCATCTTCTATTAGCTTCTG
GTTATCTGCCAAAACAACAAACAACGTTTTACCTGTGCATGTGCTTCTAA
CGTCGGCTGCACGCTGAAAAGAAAAGAAGTTCACTCATTGGGATTAATCA
TTGAAACTTAGGCGCCGGAATGAGATTCGAGAAGCTTTGCAGTCGAGCTC
TGAATCAATTTGAGGCATACAAAATAACTAAAGATGAAGAAATCTGTTCT
AATAGATTTACACACAACAGTACATAAATATCCCCCCCCCCCTGGTTCCC
CCTGTTTGGCAACCTGAAGAGTGAATTTTCATTTCCTAAGCTGCAATCAT
TACTTTTAGACTTCTGAAGAGTGAAAGATTTCAAGTACATACAGGCTATA
ATTGACATAGAACTACTGGAGCTTTTCCATTAGGGACGTCACATCCTATT
TTAAGCCCGACGACCATTTAAGTGTTCAAATGCAAAAACAACAACCCAGT
TCAATATGAATCAGTTTCATTGCTATTTTTTTCATACTTCCATTTTCTGC
CTTTTGCATATGAGAAAGTTCATGGGCATTGCTTTATTAGATTTCTAAAA
ATCATTCGATTCCTTTGATCATGTGGTATTGTGGAGGGTATTGGAATTTT
GTAGTTTTGCTCCTGTATTTATAGAGGCAATCAGGAATATGCTAACAGGA
GCTAACTCAATAATGTTTATTGATGGTGAACTAGAAATATATAATGATAG
AGACACACTCTCTTCTCCAGAGCAATCATCCCCCTACAAAAGGTTATAGA
TAAATATCTAGTAGGAACAAAAATAGATTGTATACTCAGAAACGGAAATG
TCTAATGTTTACATGAATATTAATTAGTTGAACTTTTCAATGCTTTGTGT
TAATACTACAACCTACATCTACGGAACTATTCTAACTAACAATAATGAAT
CCTTAAAAGGTTTTTCAGTCATAATAAGAAGACCTGAAACCTTACATAAT
TATGACACGGATATGGATTTTCTAAACTATTGCAAGTACCTCTTGTAATT
ATTATCAGAGGTAAAAAAAATTCCACAAATCCCTGTTTACAAGTCACAGT
CCTAGCATATTTCGATCAAATCTTCCGATTTCATTTGATCTTACTTAAAG
TCCATAATTTTTGGGAATTTAACTTCCAATCATTTTTTAGCATGCAATTT
TTGTTTTTATTGGTTAAGTGAAATGGGTTATTTATTTTGTAAATATTTTA
TGATTATTCTTTAATTATTGATGAGTGAACATCTAGGTATAAAGTCACTT
TGTATGCTCATTAATAATGGATAGTAATATTGAAAATTTGTGTGGGANNN
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ATATAAGATAGTGGTAGTGCCAGGGATTGCCTGGAGWTATTAGGCGTCGA
AGAGCAGACAAAATATGCTTAAATAATATAGAAAATAACTGCCAAACAAA
TCTATCTTTCTCTAGGTTTTTCATGAGCACACTTAAGCTTAGTTGCTCTT
CTATGGACTTCTTGATGTGTTAAGGAGTCCAGATGAAACCGCCAACAGTA
TCTGCAGTTTTTCTCAGACTGAGCACCGGCACGGATGAGATTCCACGCCC
GTTGCCTTTTTTTTTGTGGCTATAAGAAATAATCCTTGTACATGGGACTT
GTAAAAAACTTTTACATAATTTTTTATTTAACTAAAAGGGTTATTTTTCT
TTTCTTTTTGACTTACATTTTTTATTTATTACAATCTAAATAACATTTAA
AGTTATTAAACAATAACTAAACCATATTAAKCTAAGATATAAGNATATAA
TTCCCATACGTTAGCTTTTTACCCTCACTTTTTATGCTCGTATGATTGAG
TTTCCCTTTTGTTCTAACAACTATTTCTCACTATTTTCTCTCTTACACCA
TTCCCAACGTTCGGTATGATGTTACTCAGAGTGTTAAAGTCCTGGAAAAG
GTGAGAGGTTGTCTTTACTTAAGTGCAATCCACACAGAGAGTGCCCAAGC
ATAATTAAAACGTCTCCCAGTAAAGAAGACCCCCGACGATATCTGATATT
TTGGAAACTTTTCTTGGATTGAGGACTTATTCTAACTTTTTCCATAAATT
TACCTGTAAAGCTCTAAATATTGATCTACGAGTATATACTTCATAAATTT
TTGGACCATGCCACCTGATATTTCGAAAAAAAAGATAAGATTCATCCAGT
TTAATATACTTACATTCGAGTACATGTATGYATGTAATRTTATGATTTTC
TTTTTGCTAATTTAACRTATGCATAAAAAAAAAGTTTATATCAATTTTAA
TATATTATGGACGTATAATTTTGATAATGTAATAATTTTCTTAGAAAACA
AAGTACTAA

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