EMLSAT00000011305, EMLSAT00000011305-707152 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011305
Unique Name	EMLSAT00000011305-707152
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s77	supercontig	LSalAtl2s77:238456..243940 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011305 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011305	EMLSAG00000011305-694071	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000050514	EMLSAE00000050514-759442	Lepeophtheirus salmonis	exon
EMLSAE00000050515	EMLSAE00000050515-759443	Lepeophtheirus salmonis	exon
EMLSAE00000050516	EMLSAE00000050516-759444	Lepeophtheirus salmonis	exon
EMLSAE00000050517	EMLSAE00000050517-759445	Lepeophtheirus salmonis	exon
EMLSAE00000050518	EMLSAE00000050518-759446	Lepeophtheirus salmonis	exon
EMLSAE00000050519	EMLSAE00000050519-759447	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto775074	auto775074	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011305	EMLSAP00000011305	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s77:238456..243940-

protein sequence of EMLSAP00000011305

>EMLSAP00000011305 ID=EMLSAP00000011305|Name=EMLSAP00000011305|organism=Lepeophtheirus salmonis|type=polypeptide|length=522bp
MNIFSELRVVKILALNLLLNSFFVLAFFRDYKKKKLPNRAHNLLANEDVS
GRNDEVRERIMSLILEQYYKDAAERLKKSLNNPQIRSIEPLDLGMTSFRP
EGTHNNSSNDDNNNSNNMSSMFGNYGPMVPPSPGFNIHPGILKTRDDLLR
WQKNYFDSLVSNSGVISDPISDADTARRVNFLHGCTKEVPMRNNFLSNRH
VDTFTTNKPRMRVCFDPETEIPRLQKWFAANNHPTRQQVEEFVKELNSLE
CRKGRKALDVNNVIYWFKNTRAAVKRAEMKSKQNPSIPQPTSIHPPVSSS
SSSSNNNFLELRSNSPSTQSSMHWPWLSSLKNNNDNYSLPSNFATEKLSS
CEVHTPQKESIIMEAESSTKESSINDDRRSEDEDEEGEDIESKQRDSSSK
SELTSELLSPSLKEDDSLSYRPSSLIYPPPPHPPPSRAASSNPLLSHSRK
RNRTFIDPVSEVPRLEEWFLHNTHPSHSMIARYTDELNRLPYRQKFPSLE
QKNIQFWFKNRRAKCKRMNSCL

mRNA from alignment at LSalAtl2s77:238456..243940-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011305-707152 ID=EMLSAT00000011305-707152|Name=EMLSAT00000011305|organism=Lepeophtheirus salmonis|type=mRNA|length=5485bp|location=Sequence derived from alignment at LSalAtl2s77:238456..243940- (Lepeophtheirus salmonis)
ATGAACATATTTTCAGGTAATTATATATCTAGATGAAACACGATATAAAT
ATATATTGTCTATTGTTGACCTTCAAAAACACATCCCTACGTTGTGACTT
GAATAATATTATAAGAAAATATCATTAGTAATACAGAACAATGACAATTC
TGTATTTTTTTCCATTATAGATAATGTTGAATAGATATCGCTAACGCTCA
ATAAGTCATATTATACCTGTACAATAAAAAAAACCAAAAAACAGATGTGA
TTATCAGGGCCGGTCCCGGAGGAACCTCCCCTCTCCCATGGATTATTAGA
GTTAAAAATCCAATCTAAGTCGGAAATTTTGGACTATTTACGCATTGACT
TTAGAAGACCTTTTGAAAACGCCATTAGATATATACAAAGTCTAAGAGAA
GTCCCCCCAAAAAATATTTGACCTTTTTCCAAAATAAAGTCAATAATATA
AAACATTTTGTTCTAAAAAACGCAATTCGATTTAAAATGAAGTAAATTAT
TTTTTAAAAGACCCATATTTTATAAAAGAAATCCACCTCATATTAGAGTC
AGATAAAAAGATCAGAGGCAAAATTTGAAAAAAAAAAAAAAATAACATCC
CCACCCCCTACACACTCACCACCAATAAAAAATCATACGAGCAACCCTGG
TGATTTGGCACTGGAAATGATCCCTTGAATTTGAGACTAACAAAATAGAG
CTGTATCCTCTCATATGCATTATTTTTTTATGCTGTCACATATAAATTGT
CTAATTTTTACCTTATTCACCTACACAAATAAAAGCTTATCAMCAGCCTA
TGACGTCTCCTTCACTATTTTTTTTAGCAAGACCCAACCAAATACATATA
AATGACTTATTCTTTTTGTTTAATACGCTTTTTTACTTATTTAACACGAA
TATGAACTTATTTTATGGATTTTTTTTCAGCTGTTGATTCTTCCCTCTTA
ATATTTTTTTAAACAATGCTGAAACTCTAAACAAAAGCTTACGATTAAAT
ATATAGTAATTTAGCTTTTGGGGAGATTGACGTTATGGTCCAACAAAGAG
TTAACTTTTCCCCCTTTTTGAATGAAAGGTTGAGCGATACAATCAATATA
TCATATCAATTTAAAGTGATATTATGTAAGACAAGTATTAAGTTTTTGTT
ATTTGTGAATAGTGGTGTCAGTTGTGTTGGCCTTATTTATTCGGTCCACT
ATTAGGACTGTCCGTCCTAGAACAGATAAAAAAAGGAATGAATAAAGTTG
AGTGACATCATCAAGGACTGAACTTTATAAGTTTTTCGGACTGATATGCA
GGACAAAACTGGATCGGATAGAAACTGAACTGGACGGGACTGTAGTCTTA
AGTGCTAAACACTACATGTCATTATAACTTTTTTGATACATTGCTACTAC
GTATGTATTATATTAATAAAAATCCTAATAGTCATGGTTCTGTATTTAAT
ACTACGATATATGCAAATACAAGCAAAATATTTGCAGTCCTAGGACTGAA
ATTTTTTATTAGAACCGGACTGATAGGACTTTAATTTTTTTTTTTTTGAC
AAATCCAATTCTACTGTCAGAAGATATGTTGTCTCTCAAAGTAACTATAT
TTTTATGACATTCTCTTAGGCGTGGGGTTTACGCTCATACAATTTGGACA
GTATTTCCATCCCTACATATTGGTGTTTGAGTATTTCGGGTTACAAGTCA
ATTTTCAATTTGGAAAACAAGTTGTATTTTGAATTGAAAACAAGTTGTAT
TTTGAATTGAAAACAAGTTGTATTTTGAATTGAAAACAAGTTATCTTGCT
TTAGTCACTCAAAAAGGTCAACTATTCTGATCTCAGATGATACTAACGCG
AGAATAGACAAAAAACACCTGAACCATAAGACGAGTGCTGTTTTATATAA
ATAACGTGATGTTTTGATAACAGCATAACAACGCATTTTTATTTTATTGT
TAGAGCTCCTTACTGTAGTACAATTCTGTGAGAACCATTAACCCTTTACA
TAAAAACAAGAATAAACATAGACAAAACGAGGCTGGCAAATAAAGGTTCT
CTTTACGTTTTAAGTTAGTGTTGCATCAGAAAAGGGGACCACTTTTCATT
CAAAAGTAAAACTTTGGTGTTGCATTCATATATATTTCAGTTCTCCTTGA
CATCCGTTTCATTCTATTGGATATATAAAATTCCGAGTACGCTAAGTAGT
AGTAGAAAATCATGTACTTATACGACAGTATCCATTTATGTCATTAAAAC
ACATCATAAGTTGTGATTAAGATAAATACAACAGTTTTTATGAGTGGGAC
TTTTTAGTCACATCTGCCGGTACCAATTGACAATTTTTACATTTATAGAT
GTAAATTTTAACCCTATTTTTGAAAAATAGAAAAAATACAACTATGCACT
CCCTAATATACATGTTTCAATCATTTAAAAAAAAAGTCATTTAAAATATA
ATTAAAGGCATAAAGAATAACTCGAACTTCAGTATTTAAATACCCGGTAA
TTTTTTTGATTTTTTGTTTCTATTTAAATAACTATTCATATGGAGGTTTT
AGAGGGATATTTATTTGATACAAAAATATTCAAAATTTGATAAGAAACAT
ATCTCAATTTAAAATTGTGGATGATAAGCTGATTGAGTAATTCGTTTTTG
TGGATTAAAAAGCTTTGTTCTTCCGGCATAAATCCTATTTCAATTATCTG
ATTTGGACAAACCACGTCAATTTAGACTAGTTCCTCACTAAGGTATTTCC
AAAAAACTTTAGAATCTTGCCTCTAGAATGAAATAACGCCACGCCTATTT
CTAACTCCTGATTACAACGTATAATAAAACAGAAAGTTATGTTGACACAC
CCTGTATACATAAAGGGCCACTTTTTGGATACGTTGAAGTTATACATCTC
ATCAAATAATAAAATAATTATCATCGATTGTTCCTTGTGATAGATTTATT
GCTTTTGTAAAGATATTATAATTGTATAAAATAAAATGGTAATTGATTTT
ATTCAACAAATATTGTATGTATGTTCTTATTAATAGAGCTCAGAGTAGTG
AAAATACTTGCATTAAACTTACTATTAAACTCATTTTTTGTTCTTGCCTT
CTTTAGAGATTACAAAAAGAAGAAACTTCCAAATAGGGCACATAATTTAC
TGGCAAACGAGGATGTATCTGGTAGAAATGATGAGGTTCGTGAGAGGATC
ATGTCATTAATATTAGAGCAATACTACAAAGATGCAGCAGAGAGATTAAA
AAAATCATTGAATAACCCTCAAATTCGGTCCATTGTAAGTTATAACAAAT
ATCATTGTGACAATATTGAACATGTATTGACCATTTTATAGGAGCCATTA
GACCTGGGAATGACATCTTTTCGACCTGAAGGAACACACAACAATTCGAG
TAATGACGACAACAATAACTCTAACAATATGTCTTCAATGTTTGGAAATT
ATGGTCCAATGGTTCCACCATCCCCTGGATTTAATATTCACCCAGGAATA
CTTAAAACACGAGATGATTTACTTCGTTGGCAGAAAAATTATTTTGACTC
TTTGGTATCTAACTCAGGAGTAATAAGTGATCCTATTTCTGATGCAGATA
CGGCAAGACGTGTTAACTTTCTACATGGTTGCACGAAAGAAGTGGTAACT
ATATTTACGGCAAATATTAATTTATTGTATGAATAATATTTTTTTCAGCC
AATGAGGAATAATTTTCTAAGTAATAGACACGTGGATACTTTTACCACTA
ATAAACCAAGAATGAGAGTCTGTTTTGATCCAGAAACAGAGATACCACGT
CTTCAAAAATGGTTTGCAGCTAATAATCATCCTACAAGACAACAAGTAAT
ATAATATACTTTAAAATAATATCAATAATAAGCCAATTACCTATTTTAAA
GGTTGAGGAATTTGTGAAGGAATTAAATTCCCTTGAGTGCCGTAAGGGAA
GAAAGGCTTTGGACGTTAATAATGTAATTTATTGGTTTAAAAACACTCGA
GCTGCAGTCAAGAGAGCAGAAATGAAGTCAAAGCAGAATCCATCAATTCC
TCAACCAACGTCAATTCATCCACCGGTTTCATCTTCTTCCTCCTCAAGCA
ACAACAATTTTTTAGAACTGAGATCCAACTCTCCATCAACACAATCCTCA
ATGCACTGGCCTTGGTTAAGCAGTTTAAAGAATAATAATGACAACTATAG
CCTACCCTCAAACTTTGCTACGGAAAAGCTTTCAAGTTGTGAAGTCCATA
CTCCACAGAAAGAATCTATTATCATGGAGGCCGAATCTTCTACAAAGGAA
TCAAGTATTAATGATGATCGACGAAGTGAGGACGAGGATGAGGAGGGTGA
AGATATTGAGAGCAAACAAAGAGATTCTTCATCGAAATCCGAACTGACGT
CTGAGCTTCTGTCACCGAGTCTGAAAGAGGATGATTCTCTATCTTATCGA
CCTTCTTCTTTAATCTATCCACCACCCCCGCACCCTCCACCCTCCAGAGC
TGCATCATCTAACCCACTCTTGAGTCACAGCGTAATATACATGTCCCAGT
ATATGAATCCTTATCTACAGGTTTGTTCAATTAAGCCTTTAGAGCGTTTT
CACAGACATCACAGAGTGCATCATAATTGAAGTCGACACCATCTTCGGGG
GTCATAGTTGATATTTTTACTATATATAATGGACAAATTTCCATTAAATC
TTGATTAAACTCGATCAAATGTCTTTAAAAATGAATTAAAATATAAACAC
CTCTATTGATTATGATTTGGTGCCAATGATAGACTGTGATATTTTGAATA
ATATAATAGGTACTAAAAATCCCTATGAAATGGTAGATTTAATTTTGTTT
CAGATCAATTGGGGACGAGGAAAATAGGACCATATGTGACCTACGTGAAT
AATAATTTATAATGAGGTAATAACATATTTTTAATCCAAATAGGGATATA
TATATAATAAAACTAGGCGTTCGAGAAGTAAATTTTTTTGATAAACATTC
CTTTGATTTTTTGGTCTCGATTTGACACCCAAATACACAGAAATAGTTCA
GTATTTTCTTAATTTTGATGAAAAAAAGGGGTTTTATTCTTCTAAAACTG
GATTGTTTAGGTCCCCAAAATGGCAGGCATCAACCATGGTGACGTCATAT
GAAAACGCTCTATAATAAAAGATATAGTTATATAATTTATGTATATTTGT
TAGACTTCAAATGTCATCGGAGGAGTAGGAGCCTCATCATTTGGATTAGA
CTCTGAAAAGCGCAAAAGGAATCGAACCTTTATTGACCCAGTGAGTGAAG
TTCCACGATTAGAAGAGTGGTTTCTTCACAATACTCATCCATCGCATTCC
ATGATTGCACGATACACAGATGAATTAAATCGATTACCCTATAGACAAAA
ATTCCCTTCCCTTGAACAAAAAAACATTCAATTCTGGTTTAAAAATCGAA
GAGCCAAATGCAAAAGAATGAACAGTTGCCTCTAA

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