EMLSAT00000011323, EMLSAT00000011323-707170 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011323
Unique NameEMLSAT00000011323-707170
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s780supercontigLSalAtl2s780:70449..71111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011323 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011323EMLSAG00000011323-694089Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050601EMLSAE00000050601-759529Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771334auto771334Lepeophtheirus salmonispolypeptide
EMLSAP00000011323EMLSAP00000011323Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011323

>EMLSAP00000011323 ID=EMLSAP00000011323|Name=EMLSAP00000011323|organism=Lepeophtheirus salmonis|type=polypeptide|length=220bp
MPALVLGSIAPDFRTESSEGPIEFHEYIKDSWAILFSHPADYTPVCTTEL
GAVEKYADKFKERGVKLLALSCDSAESHKGWIDDIKAYNSISTFSYPILA
DEKREIAELYGMLDPEEKDSAGVPLTARAVFIIGPDKKLKLXXLXPATTG
RNFDEIIRVLDSLKLTAEKKVATPVNWTQGSDCMVIPSISEEEAKKLFPE
HKSHEVPSGKNYLRTTPHPK
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mRNA from alignment at LSalAtl2s780:70449..71111-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011323-707170 ID=EMLSAT00000011323-707170|Name=EMLSAT00000011323|organism=Lepeophtheirus salmonis|type=mRNA|length=663bp|location=Sequence derived from alignment at LSalAtl2s780:70449..71111- (Lepeophtheirus salmonis)
ATGCCGGCTCTTGTTCTGGGAAGTATTGCGCCTGATTTTAGGACTGAATC
ATCTGAGGGTCCAATTGAATTCCATGAATATATCAAAGACTCATGGGCTA
TACTTTTTAGTCACCCCGCTGACTACACCCCAGTTTGTACGACTGAGCTA
GGTGCAGTGGAGAAATACGCCGACAAATTCAAAGAGAGAGGCGTCAAACT
TTTGGCTTTGTCTTGTGACAGTGCTGAGAGTCATAAGGGATGGATTGACG
ACATCAAAGCCTACAATTCTATCTCAACCTTCTCGTATCCGATCCTCGCA
GATGAGAAGAGAGAAATTGCTGAGCTCTATGGTATGTTGGACCCTGAGGA
AAAGGACTCTGCGGGAGTGCCTTTGACTGCTCGAGCCGTCTTTATTATTG
GGCCCGATAAGAAATTAAAGCTARCCARCCTCTKCCCCGCTACTACTGGC
CGTAACTTTGATGAGATCATTCGTGTCTTGGACTCCCTCAAATTGACTGC
AGAAAAGAAAGTTGCCACTCCAGTTAATTGGACCCAAGGAAGCGATTGTA
TGGTTATTCCTTCCATTTCGGAGGAGGAAGCCAAGAAGTTATTCCCAGAG
CATAAGTCTCACGAAGTTCCTTCTGGGAAAAATTATTTGCGTACCACACC
TCATCCAAAATAA
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