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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s784 | supercontig | LSalAtl2s784:350878..356422 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011358 >EMLSAP00000011358 ID=EMLSAP00000011358|Name=EMLSAP00000011358|organism=Lepeophtheirus salmonis|type=polypeptide|length=576bp
MPNLESRDLLCRSGCGFYGNPEWKWFCSKCWREHNHVGLSPSKRSTSTTM
GLLSKSESFSKFEDKKKRQSSDRNLKHIFRKEKKKELQDISSPSKNFSKS
PYSNVSKKDFDQNPESSPEVTIVSQEFTAFLRTHVPRQGNADISHFYRRL
QKRLECHQLFRDLTEEERSTILEYSEKFVMTYFYKSLFCPNTSDDEEKDL
EIQNRIRSLNWISTRDLKCSISETSQEVRDLLYKAINDILEMDGKYAPQD
KMECLVRCCKTIFEMLKLSNSSPASADDFLPCLIYVCLKANPPRIQSNIN
FITKFCNENKLRMGEGGYFFANLCCALSFISTLDANSVSMDKDEFDSYVS
GRAMPPGSWQSSLLMCEGLQVMSQNLKTLSDLQVRHDKVQEEAQKLQCEM
DDFQKVITEEVESVLKRTEYTIKPLEPTSIDKILSAPSPLEDFLVSSSGI
ENDSILTLDMGSLAPENASLLSFDVSDVDENHGASLIKELAEYRGFSAQS
FNIPSIPCDNAITAVEEEEECISHSTTATERSSGTSTDEEGKSIVPENGG
ASSVSDNQEKLVKVFSGIFNTIDNLI back to topmRNA from alignment at LSalAtl2s784:350878..356422+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011358-707205 ID=EMLSAT00000011358-707205|Name=EMLSAT00000011358|organism=Lepeophtheirus salmonis|type=mRNA|length=5545bp|location=Sequence derived from alignment at LSalAtl2s784:350878..356422+ (Lepeophtheirus salmonis)
ATTTATTGTAGCGAATAGTAAGTAGACAGTGAAATACATAGAATATTCTC
TACGGCGTATGTAGTTGTGACGACTTGATTCACTCTGTAATTAATTTTTC
TCTCTGTCCCTCTGTTTTTGTTTCTAGCTCTCTGTCTGCCTCTCTTTCTC
TCTCTCTTGATAGTTGATTCTACTGAATTCGTCCATCATTGAAGTGTAAT
TGGATTCACTGTAGAAGGAAGAGGCTGGRCTTTGAGGCATATTATTAATT
ATTATTCGAGTTGCCTCCTCTCTGATTGGTGAGATTCGTCCTCCATATTT
CGCTACGTCTCTGCTCCCTGAGTGACATGCCAAATTTGGAATCTCGGGAC
TTGCTTTGTCGCTCAGGATGTGGCTTTTATGGCAATCCCGAATGGAAGTG
GTTCTGCTCCAAATGTTGGAGGGAGCACAACCATGTGGGTCTGTCCCCAT
CCAAAAGGTATTCATATTTCATAGAAATGAATCCCAATGTACATGCCTCA
ATATTATTAGGTCAACAAGTACAACGATGGGACTGCTGTCTAAATCCGAG
TCCTTTTCAAAGTTTGAAGATAAAAAGAAGCGACAAAGCAGTGATAGGAA
TCTAAAACATATTTTTCGGAAGGAGAAGAAAAAGGAGTTACAGGGTAATG
AATGAGTCTTTCTTCTCTAGCTACTTGCTCTACTCCGTCAGAGCTGTTTC
ACTCACGTCATACATTCCATCATAATGGAAGGAAACGCCATTTTGAGGGC
TCTATTTTGGTATTTTTACTACATCAAATGGAACCATTTCCAATAAATAT
TGATAAAATGGCTTTATTAATAAATCAACTTAACGCTTGCATTGAATAAT
ACTTGATGCAAATAATGAGCAGTGATATTTGAATTAATTCTAAGTAACAC
GTACTAAAAATACCTACGAATGGCTAGATTTTTACATTTTTTTTGATCGA
TTGTAGATGACAAAAGTAAGATAATTTGAGAAAAATATATTATTTTTTCC
ATTCTATTAGTTAATTTGTATCTACAAGATTGTGTAACGATATTATAACA
TGTAATAGAGGGATAAAATTTTGATAAACAGAAAAGTTTTAAATCCTTTT
ATTTGTTGGTGCCATTTTGACATACAATACTTAGTTCACTATTTTCCTTA
ATATTAGTAAAAAAAGGGTTTTCATTATTATAAAACTTAGTCGGTTAGGC
CCCCAAATGAATGACACCAAAATTGTGACGTCACGTGAAAACGCTCTATT
CTCATTAAATGAATCCCCTACAGAACATTTTCATGTGATGTGAACATGGT
TTATGTAGTTTGGCATTTGTAGGGCCTAACCAACCAAGTTTGTTAACTAT
GAAACCCCTTTTTTCCCATCCATATTAAAGAAAAAAGTCGACAATTAGAT
GTCAAAATGGGAGCATCAAATAAAAGGACTCAAACCTTTACACTTTATCA
AAAAACTATCCCTCGAATTATATATCTGACAATAATATATTATGCACATT
GCTATACCTAGGGTTTAGTGCTAAATTGTGGTAACTCAAAAATGAAAAAA
TAAAATTGCGCGTTATTGCCTATATGTGTCCTTCTAAAAGTCAAATATTT
AATGTTATTATCTAGTAAACAGCGACATTTAGACTATTGAAATCAATTTC
TCAGTTCCATATTACTGGTTGTAAATACAAAAATACCAGTATTCATAATG
AAAACATTGAGTTTTTAATCTTAATTCTGTTAAATAAAAATTGGAGTTAC
AACAATATGGCTCTCACCCCACTATACAATCTTATTTCCATAGTGTAATT
GCAAATTGACCATTACAATGAGATAATAAGATATTTGTCTGTAATTATCA
GACATTTCTCGTTTTTAATCGATTAAAAAAAAATCGTACAAATTTAAATA
TTTCAAAAGGATTTTGAATATGTGTCATTGACATTAAGTGTTATTCAGTG
CAAATGTTATGTCCTTTTTTATTCATAATTTTATTCATTAAGTCTTATTT
AGTCCAATGACAACATACATTATGTAGTCATTTAATATTAAATTCGTTAT
AGAAACATAAGGAAAGTGTGAGATATACATTTTCTTTTTACTCTTTACAC
AATTACTATGCATTTATATTCAAATGGACTGTATTTTTTTTCCAATACAT
TTTCGCTTCGAATAGTTCATATTTTAACGAAAGTTCCCTAATAAAATTCA
AAAGCCCATGTATAAGGCACAATTGAAAGAAAGTGTGATATGATGGGAGT
TTAGGAGCCAAAATAATATAAATTAGGATGAATATCCTGTGAGCATAACT
CTTTTAAAATGTCTTAATTAACAATTGCCATAGAGAGTTTTCACGTGACG
TCTCAATTTTGATATTGTTCATTTTAGTAAGCTAAGCAACCAAGTTTTAT
AACAATGAAAACACTTTTTTCATTAATATTAAGGAAAATGGTAAGCTATT
GGATATCCAAATGGCACCAACCAATAGAATGACTTAAACCTTACTTTCTA
TGAACATTTTATCGCCCAATTGCCTTGTTTTATTATATATCTAACCCTAA
ATTTTATTAAAAGTATGTTATTACGTCATTATATAATTTTATTTTTGTTT
TGTAAATAAAAATTAACTATTACCAKGGAAAGAAGATATTTTTCTCAAAT
TWTCCTACTTTTTCTCGTCCTTAATTGATNNNNNNNNNNNNNNNNNNNNT
CTCAATTTTTAGGGATTTTCAGTACATATTACTATGAATTAATTCAAATA
TCACTGCTTATTATTCGCATCAAGTAGTATTCAATGGACGTGTTTAGTCT
TTTTTATCTATAAAACCATTTGATAGAGTTTTATTAAGGTTTATTGGAAA
TTTGTCAATTTTATGTTTTAAAAATATCAACTTTTAGCCCCCAAGATGGC
GTCAATGAAAATGTTATATTCATAAATTCCGGACTTATGATCCTGCACCT
ATGTGTTTTCCTCCGTTTCTAGAAGTTATTATCATAATATACTATCGTAA
ATAGATTAACAATTACTTTCTTGGTAATTTATATGCTGTAATTATACTTT
CTTTGTTATTGCAATATCATGTCTCCTTCTCTAAAATTAGAATTGGTTAA
CGAGAGAGAACATATGTTTTAACTGCATATGATGTCACTGAACTCTAAAG
TTTTAAAAACTCTGAATTAGACATGTAGATTTTTGTGTTCTTTTCTTTCT
TCCCCTTTGTTGATTGTATATTTATGATGGATTTGAATGATGTGTATAAG
ACTATACTTTTTACAAATGAACAGTCTTTATTGTTCTTTTTATTAGTCAT
ACTGTCTTTCGGAAAAAAGTGAGGGAAAAATTGAGCCATTTTTTTTGCGT
AAAAAATGTGTGCGTGAATCATTAATTACGCCTCGCCAACAATGAATTTA
TATATACTCCATGCGCAGTTGATGTGCCTTATAGTCGCTTGTGTGAGTAT
TTCGAGAGAAGGAATTCTTTTTTCTCTCTGTTGAGTTTTCCTAAATTTTA
TATTCTTTAAACATATAAATGTCATTGTACATTTTTTGCAGAACACTACT
TATAAAATAGTTATATAAAACTCATGTATACTGCAGTGTATATAAGTAAA
TATTTCATGGTCTTAAAAATCAACCATGTTCTTAGTATTTTCAATATCCT
CCAAAGAGAGTGTTTTCCCCGTTTCTTTGTGGACACCWRGTAAACTTTCA
GTACATTTTCATTCCGGATTTCTTCTCTAACTGTTTTTCTTTTGATTATA
GATATCTCTAGTCCATCAAAAAATTTCTCTAAGTCTCCATATTCGAATGT
TTCAAAGAAAGATTTTGATCAGAATCCCGAATCATCGCCTGAAGTTACCA
TTGTGAGTCAAGAATTTACGGCCTTTTTAAGAACTCACGTCCCAAGACAA
GGAAATGCTGACATATCGCGTCAAATCAAATCCCTGATAGATCCCATATC
GAAAAAGGCAGATATNNNTTCCCATTGATGATATATCTAATATTGTTCAA
GATTTTTATCGACGACTTCAAAAAAGACTTGAATGTCACCAATTATTTAG
AGGTAAGTCATTACTCCGGTTTAAGAATCATTTTATAGGCGATTAATTAA
TTCATGTATTGTATAGATTTGACGGAAGAAGAACGTAGTACGATTCTCGA
GTATTCAGAAAAATTTGTGATGACCTATTTTTACAAGTCTCTATTCTGCC
CTAATACCAGCGATGACGAGGAAAAAGACTTGGAAATTCAAAATAGAATT
CGATCCTTAAATTGGATCTCTACCAGAGATTTGAAGTGTAGCATTTCTGA
AACTTCCCAAGAAGTAAGGGATCTTTTGTACAAAGCTATTAATGGTAAGT
CGTTGTGAATGTGTAGTTGGTTGTAGCATGTTTTGTATTAACCCATAWAT
TACATAGATATTTTGGAAATGGATGGGAAATATGCGCCTCAAGACAAAAT
GGAATGCCTTGTACGTTGTTGCAAAACCATTTTTGAAATGTTGAAGCTGT
CAAATAGCTCTCCTGCTTCCGCGGACGACTTCCTTCCCTGCCTCATTTAT
GTTTGTTTAAAGGCTAATCCACCTCGCATACAGTCTAATATCAACTTTAT
AACCAAATTTTGTAATGAAAATAAGCTAAGAATGGGTGAAGGTGGATATT
TTTTTGCTAATTTGGTAAGTTAATAATTTTTGTTTTAAGGATTGAGCAGT
TCTTGAGTAATTAAATCTCCACCTTAGTGCTGCGCATTATCATTTATTAG
TACCTTGGATGCTAATTCAGTCAGCATGGACAAAGATGAGTTTGATAGCT
ATGTGTCAGGAAGAGCAATGCCTCCAGGTTCGTGGCAAAGTTCCCTTCTT
ATGTGTGAAGGACTTCAAGTGATGTCCCAGAATCTTAAAACTTTAAGTGA
TCTCCAAGTTCGACACGATAAGGTTCAAGAAGAAGCTCAGAAGTTACAGT
GTGAAATGGATGATTTTCAAAAAGTTATAACAGAGGAAGTGGAGTCCGTA
CTCAAAAGGACTGAATATACCATAAAAGTTAAANTGCTTTATTAGTTGAT
GAAAATTCACCAAGTACTGTTTTACTGCCTGAGCCCTTAGAGCCAACATC
CATTGACAAAATATTAAGTGCACCTTCCCCATTAGAAGACTTTTTAGTTA
GTAGTTCAGGGATTGAAAATGATTCTATTTTAACTCTTGATATGGGTTCT
CTTGCTCCAGAGAACGCATCACTGTTATCTTTTGATGTGTCTGATGTGGA
TGAAAATCACGGAGCAAGTTTGATCAAAGAGTTAGCAGAGTATCGTGGAT
TTTCTGCTCAAAGTTTTAATATACCCAGTATTCCCTGTGATAACGCAATT
ACCGCTGTTGAAGAAGAAGAAGAGTGCATCAGCCATAGTACAACTGCAAC
TGAAAGATCCAGTGGCACTTCAACGGACGAAGAAGGCAAATCTATTGTTC
CTGAAAATGGTGGGGCTTCCTCAGTGTCTGATAATCAAGAAAAGCTAGTC
AAAGTTTTTAGTGGTATTTTCAATACCATTGATAATCTAATATAA back to top
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