EMLSAT00000011366, EMLSAT00000011366-707213 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011366
Unique NameEMLSAT00000011366-707213
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s785supercontigLSalAtl2s785:16987..18856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011366 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011366EMLSAG00000011366-694132Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050821EMLSAE00000050821-759749Lepeophtheirus salmonisexon
EMLSAE00000050822EMLSAE00000050822-759750Lepeophtheirus salmonisexon
EMLSAE00000050823EMLSAE00000050823-759751Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769286auto769286Lepeophtheirus salmonispolypeptide
EMLSAP00000011366EMLSAP00000011366Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011366

>EMLSAP00000011366 ID=EMLSAP00000011366|Name=EMLSAP00000011366|organism=Lepeophtheirus salmonis|type=polypeptide|length=250bp
MEEKLQFAEEDRLSVSYKNSFKTYLYNPYNRDILGRSLLSWAKVLLYSFL
FSIFTTFIFTISLWTFYQTLDSHTPKLQLNSSFIGSNPGLGFRPLLKDTN
PYSSLIHFIHGGSGTWGDLTENLIDFLKQYDPGHWANAGTSQTKCHWTSG
PRKCAGKGEEIENKCPELNMVWLHCDGETAADKEHIGPLTYTPYRGFPAY
YFPFYNQIGYLQPVVMVQLLAPSPGVIMNIECTPWAKGMVHDRVTKRGMK
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mRNA from alignment at LSalAtl2s785:16987..18856+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011366-707213 ID=EMLSAT00000011366-707213|Name=EMLSAT00000011366|organism=Lepeophtheirus salmonis|type=mRNA|length=1870bp|location=Sequence derived from alignment at LSalAtl2s785:16987..18856+ (Lepeophtheirus salmonis)
ATGGAGGAAAAACTACAATTTGCCGAGGAGGATCGATTGTCCGTATCGTA TAAAAACTCTTTCAAAACTTATCTCTATAACCCTTACAATCGTGACATAC TTGGCCGCTCCCTACTCTCATGGGCCAAAGTGCTTTTATACTCATTCCTC TTCTCCATTTTCACCACGTTTATTTTTACCATTTCTCTTTGGACATTCTA TCAAACCTTGGATTCACATACTCCTAAGCTGCAGTTAAATAGCTCTTTCA TTGGTTCGAATCCAGGTCTAGGGTTCAGACCTCTTCTCAAGGATACAAAT CCATATTCCTCTCTAATTCATTTCATCCATGGTGGATCTGGAACGTGGGG TGATTTGACAGAAAATCTCATAGACTTTTTAAAACAATATGATCCTGGAC ATTGGGCAAATGCTGGAACTTCACAGACTAAATGTCATTGGACGTCTGGA CCTCGTAGTAAACAAGACGCTTGTGAATTTAATAAAGAATGGCTTTCAAA TATAGGTACAGGTGTTACATATTTGCAGTGGCGTTTCTAGACCCCCTCCC CCCCCCCAAAAAAACAAAAGAAACTGGTAGCATACTTATATATATTTCGA AGTTTATTTTTGGTGTTATCACACATAAAATTCAAAACAGTCGAATAGAT CATTCTGAAGTTAAGCAAGTAGACTTACAGCAAAACTTGTTTCTATGATA TTTTTTGGCCCTCCAAGTTCATTAAGAGGCTGTTTTTGACCTAAATAAAA TCTCATTTTCCTTCTTTCTTTCAATATCTCTCTAAAGCTAGCAACACCCT AAATATTTGTATGATTAATTTAATGATATGATAGAATAATTGATTCACTA TCTTCTTAGGTGCGGATATTAAGTGTATCGAAGAGGAAAACTTTGGATTT AGTTTTGGCAAACCCTGCATTTTGATCAAGCTAAACAAGATCTATGGATG GAATCCGGAGCCTTTTTACAATTTTACAGAAGTCGAGGAGCATCCAACAA TGCCGAAATTACTCAAGATGCACATTATGGACACATGGCGTACAGAATGT GCTGGAAAAGGAGAAGAAATTGAGAACAAGTGCCCAGAGCTCAACATGGT CTGGCTTCACTGTGATGGAGAAACAGCAGCTGATAAAGAGCACATAGGTC CTCTTACCTACACACCCTATAGAGGATTCCCAGCTTACTACTTCCCATTT TACAATCAAATTGGATACCTTCAGCCCGTTGTCATGGTACAATTATTAGC TCCCAGTCCAGGGGTTATTATGAACATTGAGTGTACTCCTTGGGCTAAAG GAATGGTGCATGATCGTGTTACGAAACGGGGCATGGTGCATTTTGAATTT CTTATGGACTGAAGTTTTAGTAATTTTGTATTTATATTAAACCAATTTTA ATATCTAGTAGGTCTTGAGAGTTATCAATTATGTGTGTTTGTTTGTATTA AGAAACTGTGTCATAGATTTATACAAATAAATATTTATATATATTAAACT GTCCTATTTTTGCGTAAAAAAATAATTATTCTCTTTGCAAAAACTTTTTG GCTAGGGCCTATCAAAAACTGACTTTCACAAAGTTAGAGGGATCTCAGGC CATTTAATCCTCTTCGCTTTTTATTTTTTGTAACAAATTATCTAAGCGTC TAAACTTTAATGATTTAACATGTTCTATGCCAAATGAGCTTCTTATCTTT TCACAACAGTTTATTCTTTTTTCAGACTTAATTGCCTAGTTCTTGGACTT GTTAGTTATACAATTTTCTAAATTTATAACGATTCTTAAAAGCTTTCTTT GTTTGAGGTTGGTGTTTGATCATTTGGCACTTAGGCTATTTATTTTTTTT ATAAAATTTTGCAGAAATAA
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