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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s787 | supercontig | LSalAtl2s787:114930..122437 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011373 >EMLSAP00000011373 ID=EMLSAP00000011373|Name=EMLSAP00000011373|organism=Lepeophtheirus salmonis|type=polypeptide|length=577bp
MEETLTTGGIPPLRGGVPSQLKKRKRLNAVLDKISHRSSVTDSNGHRKRD
TNTNNNNSKKNNNRSIITTTKTKTTNSNTMFGRSERDVSASQKRELWREN
PQKKVDEQEXKVRTEPLHISISNKKLNLESSGGGGSESLEESEIDVFSPK
RSPHSSPQVSLDSPRICFSPLRIKDSIEEELEDDYRGDDDDERRGSGRGA
ATSLNVPKFSIRGCESLDSETILPHFVKKSSSRSTSKYIRSISPNPSLQS
LSHLPTYLTEIYRRRCLSDTDLSATLEDLIKAKTQQQLHSSRPRFLPGGV
QPHHHLSLPIKQGESLESDSQESPLDLSIRSSVSSTTGLSYKSISTSSVD
SVSNVNTMXTTTIKSMPPTLRSSLEIVETSGNPDVSYSCPICGQMFSLHD
RLAKHMASRHKSSRSSDSTNTKAYACEVCKRSFARSDMLTRHMRLHTGIK
PYTCRICGQVFSRSDHLSTHQRTHTGEKPYRCPTCPYAACRRDMITRHMR
THTRYELSESTSAEETHYSSDSLKSSRSISCESDWNQDSKETEAPTXTIT
TTVTTKPPSPMDTTDKQTLFKVDSNKR back to topmRNA from alignment at LSalAtl2s787:114930..122437+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011373-707220 ID=EMLSAT00000011373-707220|Name=EMLSAT00000011373|organism=Lepeophtheirus salmonis|type=mRNA|length=7508bp|location=Sequence derived from alignment at LSalAtl2s787:114930..122437+ (Lepeophtheirus salmonis)
GTAGTAGTGAAGTATGTATGCAATAACAACAAAAATAAGAATAAGAACAA
AGTAGTTGCTTGGTATTTATTATTCCTTCTTCTTTACTTGCGTGTGTTTT
TTTTCTTCTTCTTCTTGGAGTCCCATCACCATCAAAAAGAATCATCATCC
ACCTTCATCCACCATCGCCGCCAACGCAAGCGCCACGCCCGTTAAAAAAC
TAATGTGTATTATTTTTAGTGTCACCTCTGAAGTAGTCGAAGGCAGTGTC
AGACAAGGAATTACTTATTTGCTTTTTTGTTGTTGATATAATATTATACT
TACATATACATAAGTATTAATAAGCTAACTATAGGTGGTACACATTGATA
GCACACATTCCATGTACCTACAACTTATTAGGTAGATTTTAACTACCATT
TTAACATAGTATCTACCTTAGAAGAAGAAGAAGAAGAAAAATATCCTCTT
ATGTGAAGTTACAAGTGTGAACTACTCATTTTTAAGGCCTTACTCCCTAC
ATTTATAATACTTTTGATTTGAAGAACAAACATCATTCGTCGTCCTAAGA
GGAAAACTATAATAATGTCTACTTCTTCATATTCTAATAATTCGTCTCTC
TCGAATTCTTCTTCTTGCGTACATTGTTTTCAAGGTATGAGAACTTCATA
GTTTTGTTTTTCTTTTTTTATATTATTTTTTATTATTATTGACTTACCTT
CGTCTTGCATTTCTTCATACCTTATTTTTCGAAATCGTCAAATAAAAAGG
TTGAGGCCCTGACCTTATTCTAGAATATTACACTTCAAGTTCTTGTTAGA
GCCTTTCAACACCAACTGTATATACACATATAACAAACGAGATATGCATG
AAAAACTTCATTAAAAAATTGCAAAAAATATATATATTTAAAGGCAGAGA
TTAAGTGTACAATATAACATTATATAAAATATATTCATACAATTTTTTTT
AAATTTTTTTTGCAACACTTTCTGACCCCTGCAAATATTTTGCTTTTTTT
CACATTTATTTATTTATCTACCTTTTATTAAATAACTCAAAAATAATAAT
CATCTAGCCATATGCACGACTCGTGGGAGGTGGGGAAAATATTAGAAAGG
GTCAAAGAAAGTCGCATATTTTTTTTTGCGAAATTGCATACTCAGCACCT
TARCTCTAAGAAATTTTGTAGTTTACAAAATACTACACTAATCAGGGGCG
TCCGCAGGGTGTGGGCTGGAGGGGCGGCAGCCCCTTCCCATAATTAAGGA
ATATTCCCTTTTTACCAGAAAATTGTTTCGTCATTTGACCAAATTATGCA
GCAGAGCAATAAATTTATTATTTGATATTTTTCTTTCCAATAAATTTTAT
TTTCTNATGAATAGCTATAAATTTTTGAATTTTTTTTTCCAAAAAATTTA
TTTTATTGTGAATAGGTATGGATTTTTGATTTTTTTTTTCCAAAAAATTT
AATATTTGAAATTTTTGTACAAAAAATTTAATTTTTGGTGGTTTTTTTTA
TATTAATTTCAAAAAAATTTAATTTTTGGTGGTTTTTTTTATATTAATTT
CAAAAAAATTTAATTTTTGGTGGTTTTTTTTATATTAATTTCAAAAAAAT
TTAATTTTTGGATTTTTTTAAAATTCCAAGCMCCAAGCCCCCCCCCCCCC
TATAATAWATTCCTGCAGATGCCCCTAACAATACTATAGCTTCTTACTAC
ATTTAATTATATTAATTTTCTGAGAAATTATCTATGTGGCTAAAGAGAGT
AAAATGTACCTTTGAGGCATATTATTGTATTAATAAATTTTCTTGGATGG
KCTAGTACTATATACTAAAATATACACGGTTTGAAGAAAAGAAATTTATT
CTCCTTTGCCAGATGACTCCTTTTTCTAACTAGCTGCATAATTATAATTA
AATACGATTCAGTTCGTTTTTGGACTATGCCTGTTGTTCCATGCTTTACT
ATAATCATGATCATTCCTGGACATTATTTTTTATTAATTTCAAAAATGTT
AAAATATGACTCATAAAAAGTCAGAGAGAGAGAGAGAGAGAGTGAGGGAA
GGAGGGAAAGGGAGAAATGCAGTTTGATTCAAAAAATGTACATACAATAT
AATGCATAATATATTTGTAGTATTTTTTCTTTTAAAAAAATATTAGCAAG
CCCTTTTCAAGGAGAAGGCCTTGACATTGAATTACAGGAATCATTTTAGA
AAGCACATCACTACCACTTCTTTTTTTCTCCTCCTCGAAGGAAGAAGTCT
CTCCTTCGTTTGAGAAATTAGTACAACTGTATATTTTTTTGCAAGAATTA
AATAAGCAGATCCCACTTGAGCCTTCCTTCAGATAGTAKTAGCCTCTCTC
ACTATTTTTTGTTGTCACTCATTGATTTTGAAAAGATAGAATGGTAATAA
CTAACTTTTATAATTAATAATAGTAGGGGCTTGAATTGAACATGTTAATA
ATTCAATATATGCTTGATACAGCATATTATATAAATCCTTGCAATAAATC
CATTTATAGTTGATAGTAAATAACAACTTATTCGTTCTTATCCTTTAGAT
TCAAATCCACATCAAGATGTCGTGGCCCTGGAGTTATAGTACTCCATCAC
CTTCTCCTACCCGCACTGAGGAACTTAAATTTACAAATGGAGGAAACATT
GACAACGGGTGGGATTCCACCTCTCAGAGGAGGAGTACCCTCTCAACTCA
AGAAACGTAAGAGGCTCAATGCAGTTTTGGATAAAATATCTCATAGATCC
AGTGTTACTGATAGCAACGGTCATCGGAAAAGAGATACGAATACAAACAA
CAATAATAGCAAAAAAAACAACAACCGATCTATAATTACGACTACGAAGA
CGAAAACGACAAACTCTAATACTATGTTCGGCAGGTCCGAACGGGATGTG
TCAGCCTCGCAGAAACGGGAATTGTGGCGTGAGAATCCTCAGAAAAAAGT
GGATGAGCAAGAGKCTAAAGTTCGAACGGAGCCTCTACACATTTCCATTT
CTAATAAGAAACTTAACCTTGAATCCAGTGGTGGGGGTGGGTCGGAATCT
CTTGAAGAGTCGGAGATTGATGTATTTTCACCAAAGAGATCTCCGCATTC
CTCACCACAAGTTAGTTTGGATTCACCTCGCATTTGTTTTTCTCCGCTGC
GAATTAAAGATTCTATAGAGGAGGAGTTGGAGGATGATTATCGGGGTGAT
GATGATGATGAAAGGAGGGGCAGTGGACGGGGTGCTGCTACTTCTCTCAA
TGTTCCTAAATTCAGTATTCGAGGATGCGAATCCCTTGACTCAGAGACAA
TACTCCCACATTTTGTTAAAAAATCATCTTCTCGAAGTACTTCAAAGTAC
ATTCGATCCATCTCTCCCAATCCCTCTCTACAAAGCCTGAGTCATTTGCC
CACCTATCTTACTGAAATCTATAGGCGTCGCTGTCTATCAGATACGGACC
TCAGCGCAACTCTTGAAGATCTCATTAAGGCTAAAACTCAACAACAATTA
CATTCGTCTCGTCCTCGCTTCCTTCCTGGAGGTGTTCAACCCCATCATCA
CTTGTCACTCCCCATCAAACAAGGGGAATCCCTCGAGTCAGACTCTCAAG
AATCTCCGCTTGATTTGTCCATCCGATCAAGTGTAAGTAGTACAACGGGT
TTGTCCTACAAAAGTATATCAACATCAAGTGTGGACAGTGTTTCGAATGT
GAATACTATGYCTACCACTACAATCAAGTCTATGCCACCTACACTCCGCT
CATCCCTCGAAATAGTAGAGACTTCTGGGAATCCTGATGTATCCTATTCC
TGTCCAATCTGTGGACAAATGTTTTCCTTGCATGATCGTTTGGCCAAACA
CATGGCTTCCCGTCATAAATCCTCCCGTTCCTCTGATAGCACAAATACCA
AAGCCTATGCTTGCGAAGTCTGCAAACGCTCCTTTGCTCGATCGGATATG
CTCACAAGACACATGAGACTTCACACTGGGATCAAACCCTACACATGTAG
AATTTGTGGTCAAGTATTTTCCAGATCTGATCATCTTTCTACACATCAAA
GAACACACACAGGCGAAAAACCATATCGATGCCCCACTTGTCCTTATGCT
GCATGTCGAAGGGACATGATTACTAGGTAAGGATTTACTCAAATTAAATA
GGGTTATTTAACTCGATCTCTCATTAATTTTTTATATTCATAGGCATATG
AGGACTCACACCAGATACGAATTAAGCGAATCCACGAGTGCAGAAGAGAC
ACACTATAGTAGTGACTCTCTCAAAAGCTCTCGCTCCATATCCTGTGAGT
CAGATTGGAATCAGGATTCCAAGGAAACCGAGGCACCCACTMCCACCATC
ACCACGACAGTGACGACTAAACCTCCAAGTCCCATGGATACAACGGATAA
ACAGACATTATTTAAAGTAGATAGTAACAAGAGATAGCTAAAAGCGTAGA
TACATACATAAAATGTATATGTAGTTACAAAACTAGGTATAGAATATGTA
GGTGAACAAATCATTTTCTCATCACGATCTTCCCGGACCTTACAGCTGAG
TTACATATGTACGGTATCTATGTAGACTAAAGGTAAGAGAGCTTTATCAG
AAAGCCAAACATCATCCAAGTATACAACATAAATAAATATTATATCGAGA
ATATGATACATTTTTCTCAACATTCCTCTTGTAGTGATGGCGCAGTTAAA
CTGCTAATTAATTACAAGTTACATATAGATGCATTCAAATCAGTGTTAAT
CTCATCTTTCATTCTTTTGTATGTATGTATGACTATTGACAACTCATTTA
TGTATAGTATATTGTATTATGTTAAAACACACTTATGTATGTTTATAGTT
ATTATGGGTTATGATGACTTGAGTGACCTATGTCATGCTGCTGAAGAGCG
TATATAATATGTATTATATACATATTTATATTGAACTTTTGACAAAGTGA
TACTTGATAACTAAACAACTAAGTTTCCCCGGTGACAATTTTTTTATGTA
TTATTTTCAAAAGAAAGAAAATTTATAATATACATAGTATTTATTTTTCA
TTACTTCTTTAAATTTGATAAAGGAATATTGGCATTACATATATATCAAT
TCATTATCCTTATAAAATGCACGACTTTTTGTTCATCACTGTGATCACTC
GTTTTTTATTTGTATATACATTATATATACTTTAAACGACCCCTATCATC
ACTTAAATCTATTTCCTATTCATTATTAGTTTCTCCCACCTCAAGCCCCC
CACAAAACGTTTCATTTTAAATTTTTGTATAAAAGTTTCATTCCTGACAT
AATATTTATTATTATTAAGTACTCGTGTCTTTATACTTTATTTTATTATT
ATTTTTGCTCAAATTTAAATGTTGATACATTCAAGGGTTGAGAAATTATC
ATAATTATTGTTATTTTATTTAGTTTCATTCACTCAATCAAGAACCCTTG
CTGCTCAAAAATACAAAAATGATACAAATAGATAATTATACTTTCTTATA
AATAAATATTTAGCTGTAAAGTAATATAAACCTACCTATCCATCTATATA
TAAATATATATATTCAAAATAAAATACAATGACTAATTAATTATTTTTTA
GAAAGAAAACAATAACATCATTCATCTTTCTTAGTTAAGAAATACTTTTA
ACTAGTTTTAAAATGGAAACATCCTCGTTGACCTGAACATTATCAATATT
CAAGGGAGTAAGGAAAATATACTGAAATTTCCGAGTATCCGTAGCAATAT
TAATAATAAGATCCAGGGCAACTCTTCGATTAACCATGTCCATAAATACA
TCAAACTCGTCCATGATCCGAAAGGGTGGATGCATTGAGTCCCAAAGAGC
TAATATCAAAGAAATTGTAGAGTAGCTTTTCTCACCACCAGAGAGAGTCT
TGAGTCCACGTCTCTGTTTAGATACACTACTTCCTTCAGGATTCACACTC
ATTCGAAGAGAATTCTCCTTGTGATCAAAGGACAGCYCCCCAATATAATT
TSGAGCCGAGAGACGCATTGAGAAAGCCATTTTAATTCTGCGACAAACTG
ATTTTCGAATTTCTACAAACCCTAGCTTACGAATATCCAGGGTTTCTCCC
AGTCGCTGTATTTTCTCGCTAAGAGTGATGCATTTTGTCGTAACACTACG
AAAAAGATTTCCCAATCGTCCATATTCCTTCGTTATGGTCTCTGGCGACT
CGTGGACCCGTTCTTGTCGCTCCTTCAAACTCTGCTCAGCGGCCTGGATT
TTATTGTATATTTCTAAAATAAAAATAAAATTCAAACAATGACATAAAAA
ATTATATTCTGTAATAAGTAGTTTGATATCTACTCACCGTCTTTGGAGCG
AATGGTATCAATCCTTTCCTCACTCCACTTTTTAGCCTTTTGTAAATGTT
TATCTATTTCAAGGGACACTTTGTCCTTGTCTTCTTGTTTCGTAGATATC
ATTTCACTAAATTCAGTCTTCTTTTGAGTAATTCGATTCCTCTCTTTGTC
AATTTGATTAATATCACTTTGAATGTTCAACATTTTTCGTTCTAATGACT
CAGTATTATAGGTAGAGCATTTTTCTTCGATTTCAGCATAGTTTTTTTGA
GCGGATAAACAAACTTCTTTTACAGAAGCAAATTGCTCTGATTCACTCTC
CAGCTCATCACTTAAGCGACCCTTCATTTCCTCAAATCCTTCTAGATCCT
CTTCCATCACAACTACATCCATAGGCGGCTCTTCCGTCTGCTCCTCAGAA
TTAATAACGTTGAGCTTAGCACTTTTTTCAGTAATTATCCTCTGTTGTTC
ATTAATCTTTTTCTTACTCAGTGACCGTTCCTCGTAATTTAATTTAATGT
TTCCACTCTTAAGCGACTGAAAAATTATTTAAAATAATAAGCACAAAATA
ACGTATAAAAAACCATTTTACTCACATCATGAGCTTCTTGAATGGCATTA
TACTCTAACTGAGCAGCATTTAATTCTTTCTCTAGACCTACCAAGTGTTC
TCCCACATTTGACTGAATTAATAGTTGCTGACTCAGTTGAGCAGACATGT
AGGATCTAAAAAGGGCATAATATGTATGAATATAGAAATGTATGACAATA
AAATACTTAGTATATAACCCACCGATAAGGATGAGAGTAATAAGAACAGG
CACAGTGTCGTTCCTCCGAGTACACAAGACCGTAACTACAATTTTTTGGA
GAACTTTGAGAAAACATCTTTTGAGCTAAAGATTCTGTGGGAAGAATAAG
TATTTTTTCAATTTTACGATGATCAATCAAACAGTTAGCAATATTCGCGT
CATCAAACTCCAATAGGTCAAAAACGGAGGGATAATTCCCTTCATTAACT
TTTTTGTTAGAGACATCATATATATCCTTTCTAAACGTGAGAGTGTATTT
GGAGCCCTTATAGTTATAATTCCTAGCGAACTTTTCAAATACAGTCTTAT
CTTCATAATTATCAAAAATAAAAGCTTGACACAATTTGCGTAGTTCTGAA
TCGACAAG back to top
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