EMLSAT00000011386, EMLSAT00000011386-707233 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011386
Unique Name	EMLSAT00000011386-707233
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s787	supercontig	LSalAtl2s787:163367..168814 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011386 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011386	EMLSAG00000011386-694152	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000050899	EMLSAE00000050899-759827	Lepeophtheirus salmonis	exon
EMLSAE00000050900	EMLSAE00000050900-759828	Lepeophtheirus salmonis	exon
EMLSAE00000050901	EMLSAE00000050901-759829	Lepeophtheirus salmonis	exon
EMLSAE00000050902	EMLSAE00000050902-759830	Lepeophtheirus salmonis	exon
EMLSAE00000050903	EMLSAE00000050903-759831	Lepeophtheirus salmonis	exon
EMLSAE00000050904	EMLSAE00000050904-759832	Lepeophtheirus salmonis	exon
EMLSAE00000050905	EMLSAE00000050905-759833	Lepeophtheirus salmonis	exon
EMLSAE00000050906	EMLSAE00000050906-759834	Lepeophtheirus salmonis	exon
EMLSAE00000050907	EMLSAE00000050907-759835	Lepeophtheirus salmonis	exon
EMLSAE00000050908	EMLSAE00000050908-759836	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto773640	auto773640	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011386	EMLSAP00000011386	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s787:163367..168814+

protein sequence of EMLSAP00000011386

>EMLSAP00000011386 ID=EMLSAP00000011386|Name=EMLSAP00000011386|organism=Lepeophtheirus salmonis|type=polypeptide|length=725bp
MEEEELTKLYGSPKKYEPTFKGPIKKRSCTDVICLLLLIVFITCWIGIGL
LSFTWGNPTKLIYPSDSNGEICGRQNNEGRPHLLFFNLMECLRPSALTSG
CPTPQVCVAECPSTIMSFWAEAKIRDVRDKMRPYCSIRAKKEDFENDREN
GKELIRNRLCPSWVLTSKPLLGRCIPSFHSMNNEEVHNNTVIFDTDETMD
NTAITGEKLFKALRSVADILNLKEISEKAFNDLSNTYWVIILGLVFAMAI
ALLWITLMRFTAKVMIWTTLVLSLASLVGCAVFSYFKYAELKDFVYTSDY
EFDLGFESRFAEITHNPKLWLGILIVSSVIVIVLVLLLIILRTRIAIAIE
LIEEASKAVGGMMSTLWYPILPFFGELVVIFWFIIVAMFFASSGEAQYRV
NLNGDTCADCMNGKVPFKTGDSCHIEIFNCSSSPDCKLSRCEFFRYGPTD
VANILQLINLFGLFWGLFFISAMGQMILAGAFASWYWAFDKKRDVPSTPL
LSSSYRTFRYHLGTLAFGSLIIAIIRFIRVMLERVEEKLKQYHQDNPVVK
AILCCCKCCFWCLEKFMRFLNRNAYIMTAIYGYNFCSSAREAFSLLMRNA
VRXIVLDSVTDFILLLSKMFIVGIVGIGTFFVFSGKITFLILPQLNYPLL
PISIILIGTFFIADSFFGVYEMAVDTLFLCFLEDIERHDGTPEKPYYMSK
NLKKILGYSKSKKVSPAPKSTTKSE

mRNA from alignment at LSalAtl2s787:163367..168814+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011386-707233 ID=EMLSAT00000011386-707233|Name=EMLSAT00000011386|organism=Lepeophtheirus salmonis|type=mRNA|length=5448bp|location=Sequence derived from alignment at LSalAtl2s787:163367..168814+ (Lepeophtheirus salmonis)
TCTTTATACAGAATAATATGTATTTGTCTTCTTTGGTCTTAAAGTGGAAA
GGCAGCCATAATTGACTTAAGTAAATAATATATTGGATCTTGGAGTGTTT
CTCAATTATTGTATAGATGCCCTCATTCAATATTTGATATAACGATGTAA
GATGAAGATTGAGAAGAGGTAGTTGCATTCCTCCTCTAAAGTGGCGGTTT
TTTTTAATATTATATACTACGAGAAGAGGGCATGTTTTGTGTACTGTAGT
AGTTCTTGATAAAATTATTATTCCTTGCTGCTTGCTCTCTTTATTCTATT
TCTTCTTCTCTAGCAGCCCTCTTCTTCTCACGATTGATGTAGATTTTGTT
TGAATTCCGAAGAATATTGTCAGTCATTTGAAGCACGCTTGAAACGTTAT
CAGTTGCGCGGTCTGCAAGTTTTTTTAATTCTTTGATGGTATGTTACAAA
TTACAATTTAACACACAAAATAACATTTTGATTACTTTAAAATGACCTAG
AATAAATATTATTTACATATAATAAAGGGATATATGCTAACAGCCAACAG
GAAACTCTTAAAGCTTATCAACATTAATTTTTTTTAACTTTCTCACAAGT
TATCATTGAGAAGCGTTTTCCGTAAAGAGAACAATTTTACTCTTATCTAA
TGAAATCAGAATGAATAATTATATATTTATTTTCTAAGATAGCTAAAGGG
TTCCTTATACGAAATAACATATAATTAAAAATCCCTAATTAATTAAAAGT
AAAAAAGAGCCTGTGGTCTCTATGACTACAATTCCACTAATAAGCAATAT
CACTATCTATCAAAAAAAATTATGTTAGTTCATGAATAATTAAATAAATA
ATATAATAGTATCTATTAGTACTTTTTACTCGTCAATACTCGTCCTCATT
GCGTTATTTACTTTTCAGTTTCCTTGTGCCAAAGTTGTGACGGATATATA
ATATAAACATAGAGTGGCAACGATATGGAGGAAGAGGAGTTGACTAAATT
ATACGGAAGTCCGAAAAAATATGAACCCACTTTTAAGGGACCCATCAAGA
AACGCTCTTGCACTGATGTCATTTGCTTACTTCTATTAATTGTTTTCATT
ACCTGTTGGATTGGCATTGGACTACTTTCTTTCACATGGGTATGGTTTTG
ATATTTGAGGGCGGGGGAGGAAATTAAATCTTTTCTTTATTATGTGCCTT
TTATAGGGAAATCCTACTAAGCTCATTTATCCCTCCGATTCAAATGGTGA
AATATGCGGTCGTCAAAACAACGAGTAATTATTAAATTAATTATCATTTA
GTAGTTGTCTTATTCTATTGGTCTCCTTATTAGGGGACGGCCACATTTAC
TTTTCTTCAATCTGATGGAATGTTTACGTCCAAGTGCGTTGACATCGGGT
TGCCCTACACCTCAAGTATGTGTTGCAGAATGTCCGTCAACAATAATGAG
CTTTTGGGCGGAAGCTAAAATTAGAGACGTACGTGATAAAATGCGMCCTT
ATTGTAGTATTCGAGCCAAGAAGGAAGATTTTGAGAATGATAGGGAAAAT
GGGAAGGAACTAATTAGAAACCGACTTTGTCCATCTTGGGTTCTCACGAG
TAAACCCCTTCTTGGACGTTGTATTCCAAGTTTTCATTCCATGAATAACG
AAGAAGTGCACAATAATACAGTTATTTTTGACACCGATGAAACTATGGAT
AATACGGCCATCACGGGGGAAAAGCTTTTTAAGGCTCTCCGGAGCGTTGC
AGATATTTTAAATTTAAAAGAGATTTCTGAAAAAGCGTTTAATGATTTAT
CGAATACTTATTGGGTCATTATTTTGGGTCTTGTATTTGCCATGGCTATT
GCATTACTGTGGATTACTCTCATGAGATTTACAGCCAAAGTTATGATTTG
GACAACACTTGTGCTATCACTAGCTTCTCTTGTTGGATGTGCAGTATTTT
CTTACTTTAAATATGCCGAATTAAAAGACTTTGTATACACATCTGATTAT
GAATTTGATCTTGGATTTGAAAGCAGATTTGCTGAAATAACTCACAATCC
AAAGCTCTGGTTAGGGATTTTGATTGTAAGCTCAGTTATTGTAATCGTAC
TTGTTCTGTTACTCATTATTCTAAGAACGAGGTAAGTTTATCGGTATAGT
ACTATACATACCTACATATATATATATTCATTTCCCAAGTCTAATCTTCG
TTTTCTAGGATAGCCATTGCTATTGAGTTAATAGAAGAAGCTTCTAAAGC
TGTTGGAGGTATGATGAGTACATTATGGTATCCGATTTTACCATTTTTTG
GTGAACTCGTCGTCATTTTTTGGTTCATAATTGTTGCAATGTTTTTTGCA
TCTTCTGGAGAAGCTCAGTATCGAGTTAACTTAAATGGTGACACATGTGC
AGGTAATAATGATTATTTTTAAATATAGCTAGTTAGATACGAATACTAAG
ATTCCTTATACCTAGATTGCATGAATGGAAAAGTTCCTTTCAAGACTGGG
GATTCGTGCCATATAGAAATATTTAACTGCAGCAGTAGCCCTGACTGTAA
ACTATCTCGATGTGAATTTTTTCGATATGGCCCAACGGATGTGGCAAATA
TACTTCAACTTATCAATCTTTTTGGATTATTCTGGGGTCTGTTCTTTATA
TCAGCTATGGGGCAAATGATATTGGCTGGTGCGTTTGCTTCATGGTATTG
GGCATTTGATAAAAAGAGAGACGTACCTTCAACTCCTTTATTATCGAGCT
CGTATCGAACATTTCGATATCATCTGGGTACTCTTGCATTTGGTTCTTTA
ATCATCGCCATCATTCGTTTTATTCGAGTAATGTTAGAAAGGGTTGAAGA
GAAACTGAAGCAGTATCATCAAGATAATCCAGTTGTCAAGGTTTGTAACA
TAAATGCAGTGCCAGTTTTAAGAGGAAGGGGAGTGCATGAGTACTATTAA
ACTTAAAAATAGGATGCAAATCGTGCATTTTGGAATACTTTTTTTTGGGG
GGGGGGGGGGNGAGCTACTGTCTCCCTTGATATTGTGAATAAAAGGGCCC
CACGTTTTGTCTAATTCAGACTTACCTCACGATAAAACTGTCTTAGTATA
AACAGTGTTTTTGGCAGACTAATGTTTTTTTTAAATATATAATTAGGCTA
TACTCTGCTGTTGCAAATGTTGTTTCTGGTGTCTTGAGAAGTTTATGAGA
TTTTTAAACCGAAATGCATATATAATGACTGCAATCTATGGATATAACTT
TTGCTCATCTGCGAGAGAAGCTTTCTCACTTCTTATGAGAAATGCGGTTC
GAGKCATTGTTCTTGATTCCGTCACGGACTTTATTCTCCTTCTGAGTAAA
ATGTTCATCGTGGGAATTGTGGGCATTGGGACATTCTTTGTGTTTTCGGG
TACATATTTTGACTTATTTTGAGCAACAAAATTATTTAAATATAATATTA
TGTTTAGGTAAAATAACATTCCTTATTCTTCCTCAACTCAACTATCCCCT
CCTTCCTATCAGTATTATATTGATCGGAACTTTTTTCATTGCTGATTCAT
TTTTCGGGGTCTATGAAATGGCTGTGGACACTCTATTCCTGTGTTTTCTT
GAGGTAATTGTATCATTGATATAGGGTGTCTATGATATACAATTATTAAT
TACTTTTAATTTAGGATATTGAGAGACACGATGGAACTCCAGAGAAACCC
TACTACATGTCAAAAAACCTCAAAAAAATCCTTGGTTACTCAAAAAGTAA
AAAAGTTTCACCTGCACCAAAATCTACGACTAAATCTGAATGAGGAAACT
CATTCGTGTGAACTTAAGACATCAAGAGCTTTTAACAAATGAATATAATA
GATTACTCGATGTGAAAAACGCTTATTCATATATTCCTTTTAATAGTTTG
TATACTCATTATGTAGAAGATTTATCATTAGTACAAATATAGAAATTTAT
ATTTCTAATGCTGGAGTATTTGAAAGAAATATTCTAATTCTAATACACCG
TCCTCGGGTAAATCTGTACAATGAACTGCATTATGATCCTTACTGCGACC
ATATTTCGCTCTAAGGGAATGGGGTCTTAGAGTTTTACAAAGAGTTGGAT
CCGAGGGACCCACAATTTCTCGGAAACGACTCACAACCTCTGTATTGTTT
TMGTTCAAATTACTACGTGTATCGCTTATTTCTAGAGCAATGCATCTTCC
TGAAGAAAGCTCTTTCACCATCCCTGAATAGTCCTCAACAATACCCTTGT
AAATTTCGAAAAACTCTTCTGCATTTGCATATCGAAGATGAAATGATTCC
AAAGCAGTAATTTTGAAATGTTCATGGCTTTGAATGTCCTGAATAATGGA
ACTTAGTTGACCCTCTTTGATCGCATGAGGCTTTATGATGCAACATGTTG
AGTTCCGACAATTGGCACTTGATTTTGCCCGATAAGGATTAGAGAAGAAA
AACTTAAGATCCTAAAGAACGATTCGTTTTTGTCTGTTTAATTATTTAAT
AATAAAAATAGTTATTCTATACTTTAGAAACATTCTGAGTGGAGTCGAAT
TGTACAAAGTTCAATTTGTGCTTTGAATCCGACTCTATGTGAGATCTCCA
ACCACAAACCACCTTTTCCCCCATGATTTCAAGAGCAATAATGGGCCCTG
ATGTTAGTTCTTCAATAATTTCTCTGAAAAAGTATTTGTATGAATATACA
TGGATTAACGCTCACAATGTTTATGCAGATATATACTCACTCGAAATCTT
CATCCTCCCTCTTAGAGAAAAGGAACTCTCTTGCACATTGAGAGTCAAGT
TGCACCATTCTTGCTTTTCCTAAAGTATAGCCACATGTATCAATGTCTTT
AAGGATGTCTCCAAGGGAGGATATTCCTCCAGGACGGATAACAGCAATAG
TTGTTTCAGAGTGTGAGTTTAGTCGTATCCGTGTTGCTTCACTTCCATAG
TCAACGATTTGGAGTCGTCGTGAAAATATAACAACACTATTCCCGATATA
AAAGTCCTTTGCGTCCACACCAGAGCAATGAATCCTTTTCAGGAATATTT
TACGGATTTTGGGATCAAACTGAGGAAGAAATAAATTCGATTACTTAATG
ATGTATAATTGTATTATGTAAGGATTTTATACCATTTCCACTGAATTATC
TCCCGGATAAAATGTCAGAAGGAATTTACGGGTTTGCTCACTATTGCTAT
CATACCAATGCACTTCGAACACAAAGTCATCCTTCATGATTCATTCAGTT
ATGAATTTAATTCTATGAAGTATCGATTTTCCCTCCTTCTGTTAATCGAT
GACCATAAGTATATCGGGGTGTATAAATATTATTTATGAAATGTATTTGA
GAGGTTTGGAAGAGATATAAATGTTACGAAATATTGTGGTTTTAAATTTG
AATTTATAAACAAAATCTGGATTATAATGTAAATTTTATCTCAATTCA

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