EMLSAT00000011422, EMLSAT00000011422-707269 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011422
Unique NameEMLSAT00000011422-707269
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s78supercontigLSalAtl2s78:1206489..1207926 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011422 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011422EMLSAG00000011422-694188Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051069EMLSAE00000051069-759997Lepeophtheirus salmonisexon
EMLSAE00000051070EMLSAE00000051070-759998Lepeophtheirus salmonisexon
EMLSAE00000051071EMLSAE00000051071-759999Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780528auto780528Lepeophtheirus salmonispolypeptide
EMLSAP00000011422EMLSAP00000011422Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011422

>EMLSAP00000011422 ID=EMLSAP00000011422|Name=EMLSAP00000011422|organism=Lepeophtheirus salmonis|type=polypeptide|length=252bp
VSWLRTRDLRILTIGKIRYTEDPRFQPLHTEGNDLWALKIRNASFEDQGI
YECQVSYHGDTEKKLKWPXRLRILDSHAVIPGNQERHVKARSRLLLRCFI
EKSSGPPSFIYWYHNGNVMNYSDRQGVTIRTLSESESTLPSPSLRSSSSA
SRKRNLKRKRNNHPASVLTINRVTAKDSGNYTCSPSNAKNHTVQVHIVQV
QLAMQRETGSKLTPIKAVEHATDNTSSSYSTRKIDLSLALYVHLIYVTLL
LT
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mRNA from alignment at LSalAtl2s78:1206489..1207926+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011422-707269 ID=EMLSAT00000011422-707269|Name=EMLSAT00000011422|organism=Lepeophtheirus salmonis|type=mRNA|length=1438bp|location=Sequence derived from alignment at LSalAtl2s78:1206489..1207926+ (Lepeophtheirus salmonis)
GTGTCATGGCTAAGGACAAGAGATCTTCGTATTCTTACGATAGGAAAAAT
TCGTTACACCGAAGATCCACGCTTCCAACCCCTTCATACGGAAGGAAATG
ACTTATGGGCTTTGAAAATACGAAATGCGAGTTTTGAAGATCAGGGTATT
TATGAATGCCAGGTTTCATATCACGGAGATACAGAGAAGAAACTAAAATG
GCCGGKTAGGCTTAGGATTTTAGGTACGAAACTATAATTATGTATATTGT
ATACCTATAACCTACCTATAATGAGAACTCAAATATGAGCAATTTAGTTT
ATAAAAATGTAAAATATATGGTTAGTTTCTTTTCATGTAACATGTTACTT
TAAGTGTTCAATAACTGTGTAGAAAATTATTATTGAGTGCCTCATATTTC
GAAGAGATAATTATTACTTTCATATTAACACACTTGTATACCAATTAGCT
CAATAAATATCTATATATATATTTATGTAGTAGAAACGTTCATTCATAGG
AACTACTATATTTTGCTTTCATTTAGACATGGGCCATATCAAGCGTATTC
AAGGTCATATTTTTCTTTCCTCAAATTTATATTTCATTTTTTTAGTTATT
GCTAGGTATGCTGAACTTTGTAGCAGTGTATACCCATAGTTTACTATTCT
AAAGAAAATAAATTAGACCTTATTACTTATAAATTTGCAATTCTTGAGAC
TACTATCAGATATAGGAATCTATATTTATTTTAAAATAAGGTTAAGTCAA
TTATAAAGGATTACGAAAAATTATCAATTTTCTTTCTTTTTTTGACAGAT
TATTTAGTAATTTATTATTTTTCAAAACTTATAGATTCTCATGCTGTTAT
TCCTGGGAATCAAGAGCGACATGTCAAGGCAAGGAGTCGTCTCCTTCTCC
GATGCTTTATAGAGAAAAGCTCCGGGCCTCCCAGTTTTATTTATTGGTAT
CATAATGGAAATGTGATGAATTACTCGGATCGTCAAGGAGTCACAATCCG
TACATTATCTGAGAGTGAGTCAACCCTACCATCGCCCTCGCTAAGATCTT
CTTCTTCCGCATCAAGAAAGAGGAATTTGAAAAGAAAGAGAAATAATCAT
CCAGCATCTGTTTTAACTATAAATAGAGTTACGGCCAAGGACTCTGGCAA
CTATACATGTTCCCCGTCAAATGCCAAAAATCATACAGTACAAGTCCACA
TTGTTCAAGGTGATATAAGGATTTTTATACACTTTTAAATGATCTCCCAA
CTCATTCAAATTTTCTTACAATTTCAGTACAATTGGCAATGCAAAGAGAA
ACAGGCTCTAAACTTACACCAATCAAAGCAGTCGAACATGCCACGGACAA
CACTTCCTCAAGTTATTCAACAAGAAAAATAGACCTATCTTTGGCATTAT
ATGTACATTTGATATATGTCACACTTTTGTTAACATAA
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