EMLSAT00000011434, EMLSAT00000011434-707281 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011434
Unique NameEMLSAT00000011434-707281
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s78supercontigLSalAtl2s78:678330..680167 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011434 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011434EMLSAG00000011434-694200Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051138EMLSAE00000051138-760066Lepeophtheirus salmonisexon
EMLSAE00000051139EMLSAE00000051139-760067Lepeophtheirus salmonisexon
EMLSAE00000051140EMLSAE00000051140-760068Lepeophtheirus salmonisexon
EMLSAE00000051141EMLSAE00000051141-760069Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779291auto779291Lepeophtheirus salmonispolypeptide
EMLSAP00000011434EMLSAP00000011434Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011434

>EMLSAP00000011434 ID=EMLSAP00000011434|Name=EMLSAP00000011434|organism=Lepeophtheirus salmonis|type=polypeptide|length=340bp
MWRFHIQILFVVLQKSIPGHGADVFPALMPKVIPTREESYLCTPIRLSED
ETYFIIGFKPNASQHTAHHMLIYGCTEPGSTNEVWNCGEMSTXTDSAFEA
SASPCETEPQIIYAWAKGAPQLELPPEVGFKVGKGTTIKFLVLQVHYAHL
DMILPSGDDSGVYIKFTDKYQPKEAGVLLLGTGGFAPAHSTTFFETSCEV
RDDREIHPFAFRTHTHGLGRIVSGWKVSPYQNWTWSLIGKRSPQDPQMFY
SVEDKNLIITADDIVAARCTMVNDRDWEVHVGATNEDEMCNFYIMYWIKG
NGGPVRPNSCFSQGPPHWSWRGWEXGPRLKNIPDLEASQI
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mRNA from alignment at LSalAtl2s78:678330..680167+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011434-707281 ID=EMLSAT00000011434-707281|Name=EMLSAT00000011434|organism=Lepeophtheirus salmonis|type=mRNA|length=1838bp|location=Sequence derived from alignment at LSalAtl2s78:678330..680167+ (Lepeophtheirus salmonis)
TATTTTCAACTGACACAAACCTGTTGAAATTTTACGTATGTGGAGATTTC ATATCCAGATCCTTTTTGTGGTATTGCAAAAGTCCATTCCGGGACATGGG GCAGATGTTTTTCCAGCTTTAATGCCCAAAGTGATACCAACACGAGAGGA GTCCTATTTGTGTACACCTATTCGCTTATCAGAGGATGAGACATACTTCA TCATTGGATTTAAGCCTAATGCATCCCAACATACGGCGCATCATATGTTG ATCTATGGCTGTACAGAGCCTGGTTCAACTAATGAAGTATGGAACTGTGG AGAAATGTCGACGKCGACTGATTCTGCCTTTGAAGCCTCTGCCTCACCCT GTGAAACAGAGCCTCAAATTATTTATGCGTGGGCAAAAGGAGCACCACAG CTGGAACTACCACCAGAAGTTGGATTTAAGTCAGCTATTTTAATCTTCCA TTCTAAGGAGGGTTTCTTAATTAATCCCTCCCCGTCTTATTTAGGGTTGG AAAAGGTACAACCATCAAGTTCCTAGTTCTTCAAGTCCACTATGCTCATT TGGATATGATACTCCCATCTGGGGATGACTCTGGAGTTTATATCAAGTTC ACGGATAAATATCAACCTAAGGAAGCGGGCGTTCTTCTCCTAGGAACTGG AGGATTCGCTCCAGCTCATTCCACTACTTTTTTCGAAACTTCATGTGAGG TTCGAGACGATCGAGAAATTCACCCTTTTGCGTTTAGAACCCATACTCAT GGATTAGGTAAAGATACTCATTCAATTTGTGATAATCCTGGTTTGGACTT TAATATATGCGATTTCCATCATTAGGAAGAATTGTATCTGGATGGAAAGT ATCACCTTATCAAAACTGGACCTGGTCATTGATTGGTAAAAGGAGCCCAC AGGATCCCCAAATGTTTTACTCTGTTGAAGACAAAAATTTAATCATAACT GCGGATGATATTGTTGCTGCAAGATGTACGATGGTAAGTAATGTGTTTGC GGGTGGATTCATGTTATGATGATGGTTTTTGCAATATTTTTGCTCCTTTA CTAAATATTACTTTTGAAGTTTTTCTAGCAAATTTGGAGTAGGACCTTTT AATACAACTTCACATATTTTGACTTTTATTTTATAAGACGTAGAGTGAAA AAATTGGAGTATTCTATTAAAAATATGTCTTTAAAACTAATCTTAGATGA AAAGAGAAAACAAAATTGCAAAAAGCCTTAGCAAGGTAGGAATCCACCTT TTAGTTATGTTGAGATGCATTGACCAAACCAAATTACAAAAACCATCTTC CCAGGTAAATGATCGAGATTGGGAAGTTCACGTTGGAGCTACAAACGAGG ATGAAATGTGTAACTTTTACATCATGTACTGGATAAAAGGCAATGGAGGT CCAGTTCGACCCAACAGCTGCTTTTCTCAAGGCCCTCCACATTGGTCATG GAGAGGATGGGAGMTTGGACCTCGATTGAAGAACATACCTGATTTAGAGG CTTCCCAGATCTAAGTTGATTTTGGTATCTACTAGTAGAATAGTGGAAAT CCCAATGCAACATGTGACTTTTTTTGTAGCAAAGGAATATGAGAATGAAA AAAAAAAGAAATTAATTTAAATGAAGTATTCAAAGTTAGAAAATATATAA TTATAATTTTTGTTATAAAGCATTTAATCTATAAAAAAGTTGTATGAATA ATTGGATATCTTTGGCAAAAAACCTCCCAAAATGATCCCTCAAAGAATGA AAAGTTAAACAGAAATGTATATATAAGTGGTTGTATTCTGAAATAAAACG CAGAAATCAAATATAAATTTAGTAAAAATATATATAAA
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