EMLSAT00000011456, EMLSAT00000011456-707303 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011456
Unique NameEMLSAT00000011456-707303
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s790supercontigLSalAtl2s790:223614..226493 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011456 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011456EMLSAG00000011456-694222Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051234EMLSAE00000051234-760162Lepeophtheirus salmonisexon
EMLSAE00000051235EMLSAE00000051235-760163Lepeophtheirus salmonisexon
EMLSAE00000051236EMLSAE00000051236-760164Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774827auto774827Lepeophtheirus salmonispolypeptide
EMLSAP00000011456EMLSAP00000011456Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011456

>EMLSAP00000011456 ID=EMLSAP00000011456|Name=EMLSAP00000011456|organism=Lepeophtheirus salmonis|type=polypeptide|length=770bp
MEYEFLNFEGCTQEEVRHLSEILSITTPENSEDASCLPSEQESISELPPA
EPDVAHLAPAPTPALLPASVHGPLQQAHPHSHASYVPYPNVYINNVTANV
NLHHSVPPGGADGEGVLNPPPPPPPPVHVPVSSCSPPLITAYPLHHLLLP
GYNVSLSLPPPHHPSNILPIPRGLTVIRSPILDMQKSFYIQQQQQQHAHH
TPPPNHPNHPHRFPFNNVSPMYPPSPQQXPPSPQLIMQQQQQQQQLHMQQ
QSQQPPPPPLQFQEPITKEQQVMKQSVIEFGGPPIYQDMNNGEEKIEKEP
KXEEVPPKEPHKSWASLFRSSTTESQPFAESPQEKNTGNKPTARISPNNA
SVEEPRASXPPPITNVDYITXRDGQLAEFLKKYVLNHKSFFVKPRGLSNR
SNWCFVNAILQALIGCPPFFNLIRALPPLLLENGSVLKSLSDFMSEFSPM
EKFPKQHHRRNKKTEDLMIGSSFEATSMFRILLSLPSTDTFKVVEGRQED
AEEFLTFLLNRVNDEMLALMKKLDDSPGEEEMKDDDDNSDWKEVGPKNKG
CVTRRQIIGNTPLASMVQGQIRSCVTHSSSEPTATLQPFFTLQLDLQSDN
IHNVSDALINNFSMESLDGYVCSKTKLEIEASRSLSIDELPPVLILHLKR
FIYNETSGGCQKLLKRIDFPVDLEIAKEILSPNSKTKYHAKQRQYKLFGV
VYHNGGEATKGHYVTDVYHTGLSTWLRCDDCTIKSVNESSVLAHTHNSMP
YILFYRRGDTMVGSEKSNKN
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mRNA from alignment at LSalAtl2s790:223614..226493-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011456-707303 ID=EMLSAT00000011456-707303|Name=EMLSAT00000011456|organism=Lepeophtheirus salmonis|type=mRNA|length=2880bp|location=Sequence derived from alignment at LSalAtl2s790:223614..226493- (Lepeophtheirus salmonis)
ATGGAGTATGAATTTTTGAATTTCGAGGGTTGTACTCAAGAGGAAGTCCG
CCATTTGTCCGAGATTCTTTCGATAACTACTCCTGAGAATTCGGAAGACG
CCTCTTGTTTGCCTTCAGAGCAAGAGTCCATTTCAGAGCTCCCTCCAGCA
GAACCAGATGTAGCGCACCTTGCTCCTGCACCCACTCCTGCTCTTTTACC
AGCATCAGTACATGGACCACTACAGCAGGCACATCCCCATTCTCATGCGT
CCTACGTCCCCTATCCTAACGTGTACATCAACAATGTAACCGCCAATGTG
AATCTTCATCACTCCGTCCCTCCTGGCGGTGCTGATGGAGAAGGAGTCCT
CAACCCTCCACCTCCTCCTCCCCCACCAGTCCATGTCCCCGTCTCATCCT
GCTCCCCCCCTCTTATCACCGCATATCCCCTTCACCATCTCCTTCTCCCA
GGCTACAATGTGAGTCTTTCTCTCCCTCCGCCTCACCACCCATCAAATAT
CCTKCCCATCCCAAGAGGTCTTACCGTCATACGCAGTCCTATCCTTGATA
TGCAAAAATCATTCTACATCCAACAACAACAACAGCAACACGCACACCAC
ACACCACCTCCAAATCATCCCAACCATCCACATCGATTCCCCTTCAACAA
TGTCTCSCCCATGTATCCTCCCTCTCCACAACAAARCCCTCCATCTCCTC
AACTTATTATGCAGCAGCAGCAACAACAACAACAATTGCACATGCAACAA
CAATCCCAGCAACCACCTCCTCCTCCCCTTCAATTCCAAGAGCCAATTAC
CAAAGAGCAACAAGTAATGAAGCAGAGTGTGATTGAGTTTGGGGGGCCTC
CAATTTACCAAGACATGAATAATGGAGAAGGTGAATAATAATTAGTATCC
TCATTTCCATTTATAGTCTTTTTTTTGTTTGTTATTTTTTTGTCTTTTTC
TTGCTTGCAAATTTATTCAAGACATTTGATCTGTCACATTACAAACTGGT
AGACATTACTCTACATTTCTTTAGTCAATTGAATTGCATTCCTTCCAAAA
TTACTCTAGTAAGAAAAATTATTTATTTTAAAAATTATATATTTTCACTA
TTAGTAATAATAATCATGATCTATTTTTAAATAAATATGTTTGTATTTAT
CTCTTTACATATTTAGAAGAAAAAATGAATCCAATAAGAGAGGCTTCTCC
TGATCTACCATCTTCTCCTCCTCCTTCAATGCCCTCTGAAGAAAAGGAAT
CACCGATTGTAAATGAACCCCAAGTTATTACTTCTGAGNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCGGATACTCCTTCTCCTGCTCAAGAAAAGATTGAAAAGGAA
CCCAAGGMTGAAGAAGTGCCACCCAAGGAGCCACATAAATCATGGGCTAG
TCTCTTTCGTTCATCTACAACGGAAAGTCAACCATTTGCAGAGTCTCCTC
AAGAAAAAAATACAGGGAATAAACCTACTGCTCGAATTTCTCCCAACAAT
GCATCTGTTGAAGAGCCGCGTGCATCTARCCCCCCTCCAATCACTAATGT
CGATTATATTACTKCTCGAGATGGTCAGCTAGCCGAGTTTTTAAAAAAAT
ATGTCTTAAACCACAAGAGTTTCTTTGTCAAACCTAGAGGATTGAGTAAT
AGAAGTAATTGGTGCTTTGTGAATGCTATTTTACAAGCACTTATCGGATG
CCCTCCCTTCTTTAATTTGATCAGAGCTTTGCCCCCTCTGCTCTTGGAAA
ATGGATCTGTCCTTAAATCATTGAGTGATTTCATGTCGGAATTTTCGCCT
ATGGAAAAGTTTCCCAAACAGCATCATCGGCGGAATAAAAAAACTGAAGA
TCTAATGATTGGAAGTAGTTTTGAAGCCACCTCTATGTTCCGAATCCTGT
TGTCTTTGCCTTCTACCGATACGTTTAAGGTGGTAGAAGGGCGTCAAGAA
GATGCAGAAGAGTTTTTGACGTTTTTACTTAATCGTGTTAATGATGAAAT
GCTTGCTCTTATGAAGAAGTTGGATGACAGCCCTGGAGAAGAGGAAATGA
AAGATGATGATGACAACAGTGACTGGAAAGAAGTGGGTCCCAAAAACAAG
GGATGTGTCACTCGTCGACAGATTATAGGTAATGACACTTTTCTTCTACA
TTCCTAAAACTTTTAAATAATTTTTGACTTATTGAATCTTAGGTAACACA
CCCTTGGCGAGCATGGTTCAAGGACAAATACGATCTTGTGTAACCCATTC
TAGTAGTGAACCTACAGCGACTCTACAACCCTTTTTTACTTTACAATTGG
ACTTACAATCAGATAATATTCATAATGTTTCTGACGCTCTTATCAACAAC
TTTTCTATGGAATCATTAGATGGGTATGTTTGTTCTAAAACAAAGTTAGA
GATTGAGGCTTCTCGTTCCCTTAGCATTGATGAACTCCCACCTGTATTAA
TTTTACATTTAAAGAGGTTCATTTACAATGAAACATCTGGGGGTTGTCAA
AAACTCCTTAAGAGAATTGATTTTCCTGTGGATCTTGAAATTGCAAAGGA
AATTTTATCTCCTAATTCAAAAACTAAATATCACGCAAAGCAAAGACAGT
ATAAGCTTTTCGGTGTTGTTTATCACAATGGTGGTGAAGCTACAAAGGGG
CACTATGTGACTGATGTGTATCATACGGGACTTTCTACATGGCTCCGTTG
TGATGATTGCACCATCAAGTCCGTCAATGAATCCAGTGTATTAGCTCATA
CCCACAACAGTATGCCTTATATTTTGTTCTATCGTAGGGGCGATACTATG
GTTGGCTCTGAAAAGTCCAACAAAAATTAA
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