EMLSAT00000011477, EMLSAT00000011477-707324 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011477
Unique Name	EMLSAT00000011477-707324
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s793	supercontig	LSalAtl2s793:12667..19526 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011477 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011477	EMLSAG00000011477-694243	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000051316	EMLSAE00000051316-760244	Lepeophtheirus salmonis	exon
EMLSAE00000051317	EMLSAE00000051317-760245	Lepeophtheirus salmonis	exon
EMLSAE00000051318	EMLSAE00000051318-760246	Lepeophtheirus salmonis	exon
EMLSAE00000051319	EMLSAE00000051319-760247	Lepeophtheirus salmonis	exon
EMLSAE00000051320	EMLSAE00000051320-760248	Lepeophtheirus salmonis	exon
EMLSAE00000051321	EMLSAE00000051321-760249	Lepeophtheirus salmonis	exon
EMLSAE00000051322	EMLSAE00000051322-760250	Lepeophtheirus salmonis	exon
EMLSAE00000051323	EMLSAE00000051323-760251	Lepeophtheirus salmonis	exon
EMLSAE00000051324	EMLSAE00000051324-760252	Lepeophtheirus salmonis	exon
EMLSAE00000051325	EMLSAE00000051325-760253	Lepeophtheirus salmonis	exon
EMLSAE00000051326	EMLSAE00000051326-760254	Lepeophtheirus salmonis	exon
EMLSAE00000051327	EMLSAE00000051327-760255	Lepeophtheirus salmonis	exon
EMLSAE00000051328	EMLSAE00000051328-760256	Lepeophtheirus salmonis	exon
EMLSAE00000051329	EMLSAE00000051329-760257	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto769029	auto769029	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011477	EMLSAP00000011477	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s793:12667..19526-

protein sequence of EMLSAP00000011477

>EMLSAP00000011477 ID=EMLSAP00000011477|Name=EMLSAP00000011477|organism=Lepeophtheirus salmonis|type=polypeptide|length=1248bp
MKLRKKIIITGMTCNKCKMLIETAANEFNGVVFIQVFREEGYALVDFHTE
EDYLEHQVTIIESIESLVNGSKFKAHFLDKSQSDAQSHESDDHQKDKILN
LLIEGMTCQSCVQNIEGHLLKQKGIKNVHVDLSKKLGTFEYKPSVINPKI
IKEVIEDMGFDVPTDLDLHLLKVDGMTCQSCVKTIESNIGEKLDWVHVDL
KEGSVYFKSSIHSDLEVAGWVNDLGFDASESNINNRLIKLPFCETLYEKL
KSKLTSSEGIIRLDIKEEDALVFFNSDLISPNNILEQNGRTISLVDSIDK
SNGTSSNKHNIKLESQTEKCFLQINGMTCASCVAAIEKHVKKIKGVSNIL
VALLAAKAEIEYDPFCVQPTQIADSITDLGFESKVLGGVNGNGELDVRIL
GMTCSSCVYLIESNVKKLNGVESVVVALSTEIGKIKYDPSVTGPRNIIDA
INGMGFNAEVFNRQNELRNSTAEYLNHEKEIRKWRNTFCISLFFGLPCML
IMFYSMIVMSSSEHVHEENCCVVPGLSLENLLLFILSTPVQFIGGRHFYI
AAYKALKHGAANMDVLIMLATTISYAYSAKTSDALSKLISLKATEAVIVT
LGNNFEVTSERQIDVDLVHRGDILKVVPGSKIPVDGRVLHGISHCDESLI
TGESMPVEKTVDALVIGGSINQNGLLFISATHIGEDCALSQIVRLVEEAQ
TSKAPIQKLADKVAGYFVPIVVFSSLLTLVVWVVIGYIDPTLLPVSKMER
EGFNSEEITWQYAFRMALTVLAIACPCSLGIATPTAVMVGTGVGAKIGIL
IKGAEPLENAHKVTTVVFDKTGTITHGKSCVAQFVLLVSNSFMSLERMFY
LLGAAESGSEHPLALAVVKFTKSFLEIDEIKASIKDFSAVAGCGLKVVVD
LNNNTDEFALQNSNNIKNLHNIINGPSKLGCICGSEIDATILRKPGHEIS
NESKKQMPLIDVGQDDDSYKIGKASNESTILIGNRKWIRDKNFINIPEDL
ELKLLKQEELGHTAILAVIDGVLVGMLGIADTVKPEAHLTVYTLKKMGLD
VMLLTGDNRKTATSIAQQVGISSVFAEVLPSHKVSKIKKLQEKGHNVAMV
GDGVNDSPALAQANIGIAIASGTDVAVEAAXXVLXRNDLXDVVACLXLSK
RTVKRIWINFTFASVYNLFGIPLAAGVFSPLGLKLQPWMGSAAMAISSVS
VVCSSLLLKLYRKPTRPQLETIEYLKILEDKSPTRNNLDDNFEIEMRD

mRNA from alignment at LSalAtl2s793:12667..19526-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011477-707324 ID=EMLSAT00000011477-707324|Name=EMLSAT00000011477|organism=Lepeophtheirus salmonis|type=mRNA|length=6860bp|location=Sequence derived from alignment at LSalAtl2s793:12667..19526- (Lepeophtheirus salmonis)
AGACAAAATGAAATTGCGGAAGAAAATCATCATTACGGGAATGACTTGTA
ATAAATGCAAAATGCTTATCGAAACTGCAGCAAATGAGTTCAATGGAGTT
GTATTTATACAAGTGTTTCGAGAGGAAGGTTACGCTTTGGTAGATTTCCA
TACAGAAGAGGACTATTTAGAACATCAAGTAACCATCATTGAAAGTATAG
AGTCTTTGGTGAATGGAAGTAAATTCAAAGCTCATTTTCTTGATAGTAAG
GACTAAAATTCTATTTTTTCTTTCTTCTTTCTTAAAGTAATCAAAAATCC
TATAAAATGATTTAATTCTTTATTTTGTCACGTTAATTATATATTTAAAA
GAAAAAAATGTCAATTAAATATATCAACCTTGACTTATGCCTAACTAACT
AAGTAAGATTTTTTGAATAACTCCATTTGAATGAATATTTAACTTTGTAT
ACATGTGGTACATCAACATAAAAACAATCTTTAAGAAAAAAAAATCCCAA
TCTATTTATTTACTTCATAAATACAAACATGGTATTATTTTATAGCCATT
TTTGAGTCAATTATGGGCTTTGTATTCAAATTTGTGGGATTAGTTAAAAT
ATATAAAAATTTTAGCTATATTTAAGAATCTTAATTTAATTTATATTGTG
CCCGAAATGGCCCCCTTCAAATGAACTTACAAATGTTCATACAAATTCTG
TTTTTATACATTTTGGCTACTTCAAATACAAATTATGCCACACCCATAGG
CTTCATAAGAATAATTTATTGATAGAAATAGACAATAATTTGTCGCTGAA
GAATACAAATGTAATCCACACTCAATATTAAAAAAAAAAAAATCATTGTA
GCTTGTTTTTGTGTTGACAGGCTCCATATGTATATATATATAGGTAGATA
ATTTGTTTTATGATGTTCATATTATGTATTTTCTTCAATCAAATGATAAC
ACATGGAGTTTCAAATATAAATATACTTTTCATAGACACTTGAGGAATAT
GTTTGATGACTATTATTTTACAAAAAATTAGCAAAAATTCTATTTTTTTT
AATTAAGTAATTATTACCCAAATACTAATTAATTAATTTTTAATCTAAAT
AATATACTATTTATTTCAGAGAGTCAAAGTGATGCTCAGAGGTGAGTTGA
AAAGGTATATTATATACGTTTGAAACAGTAAATGGGTATAGTAGGCAATT
ATTTAGAGTTGCAGTTAGCGTAAAAATGATTATTCTAATTTAACTTTTTT
ATTTGTGACAAAAAAGTGGTCATAGAGGATATAATTGTGTCATAGCTATT
CCTTATTAGCAAATCATTTTTATCCTACTCTTACTGTTTAGTGTGATTAT
ATACATATGTATCTGTTTCAAACGTATACATATATGAAGTATAGGTTATA
CCAAAAACATTTGTTTGTCTTTCACAACTGTTATTTTTCGTTCGAGAAGT
TTAAAAAAATATATTTTAAAAAACGGACAGATAAGTTAAAAAAAATATGG
ATATGAAAAAATAAAACAATAAGTTATGAATGTCTTTATCATTTTTTTTT
TAGCTCAAATCATAAAATTTTAATTACTTAGAGACACCATCAATGATATA
ATTGTAAATAGAGTTATCATATATATTTTTCGTTCTTATCTACTGATCCC
TTGTAGTAAACCTCGTTAACATAAAATTATACTGTGTGTTTTGTTGTCAG
CTGTCGATGTTTCTCCTTTTTTTATTCTAATCAGTGTTCTGAACGTTGAT
TGGTTGACTTAGAGCTCATTTTAATTACAAAATTATTGAATGACCAATAG
TTCCATAGTTCATAATAATTGGTTACCAACTGATTTTGGGATTTTTTAAG
GTTTCTTTTCGGAGGTTAGGTTGCGTGATGTAATAAAGGTATATAATTGT
TCTTCACTATACTGATGAAATATTATACAAAACTGTATAACGTATAAATT
AAATTTACCTTTTCAACAACAAAAAAAACCTAGTCTCAATGATTTGAAAG
TCAACGAAGAAGAAAGAAAGTTCATATGAATAATTTGTAGAATCTCTTGA
TATTTATTGGTTTAATTATATTTCTTAACTTTTAAATCAGAAAGTAAATA
TTCTTATCTTATGTATAAAAATATGCGCACATTCTTTCATGAAATTTAGT
GCTCTTTTGAAACAAATCTTATTGGGGGAGACGAGGAAAGTGATGTATTT
ATATTGATTAAAGTGGAATTATAACTTAACTAATTACAAACAAAAGTTCA
AATGTACTTCTTCTGAAATCGATACTAAAAGTACAAAAAACAATGTCCAA
ATTAATAAATAAGAATAATATTATGTATCAATCTCTACGTTATGAGGATG
CTATCATTGACTCTGGGTAAGAAATTTGACGAGAAAAAGCTTTTTTTAAA
TTTAAAAAAAAATTATATTTAACCTATTATATATATATGTATTTGAATTT
ATATGTATATTAATTCTGCTATTTGATCCTTCGAAATAGCCATGAAAGCG
ATGATCATCAAAAAGATAAAATTTTGAATCTTTTAATAGAGGGTATGACC
TGCCAATCATGTGTTCAAAATATAGAAGGGCATTTATTAAAGCAAAAAGG
TAAAACTTCTCTTTTCAAATATAGTATACCAAAATTATATATAAATATTC
AATTATATTATTAGGGATTAAAAATGTTCATGTGGACTTGAGCAAGAAAT
TGGGAACATTTGAATACAAACCATCAGTGATAAATCCAAAAATTATAAAA
GAAGTCATTGAAGATATGGGGTTTGATGTTCCCACGGATTTGGATCTTCA
TTTGCTCAAAGTCGATGGAATGACTTGTCAATCCTGTGTAAAAACAATTG
AAAGCAATATTGGCGAAAAATTAGATTGGGTTCATGTAGATTTAAAGGAG
GGTTCTGTTTATTTTAAGTCATCAATTCATTCAGATCTGGAAGTTGCTGG
TTGGGTTAATGACTTGGGCTTTGATGCTTCGGAATCAAATATTAACAATC
GTCTCATTAAATTACCATTTTGTGAAACACTTTATGAAAAACTGAAGAGT
AAGTTAACGTCAAGTGAAGGAATTATAAGACTTGATATTAAGGAAGAAGA
TGCGCTCGTATTTTTCAATTCAGACTTAATATCACCAAATAATATCTTAG
AACAAAACGGACGAACGATCTCACTTGTAGATAGTATAGATAAATCTAAT
GGGACTTCTTCAAATAAACATAATATAAAATTGGAATCCCAGACTGAAAA
ATGTTTCTTACAAATAAACGGAATGACTTGTGCAAGTTGTGTCGCAGCTA
TTGAAAAACATGTCAAGAAAATAAAGGGTGATTTTTTTCCTTACATAATC
TCTTCAAATTCTATTATTTTAAGAATAAATTATTTCGTTAGGTGTTTCCA
ATATTCTCGTAGCATTATTAGCAGCAAAAGCAGAAATAGAATACGATCCT
TTTTGTGTGCAGCCCACTCAAATAGCTGATTCTATCACAGATCTTGGCTT
TGAATCCAAAGTTTTAGGTGGTGTTAATGGCAATGGAGAATTGGATGTTC
GAGTGAGTTAAAAAATTTCATTTTCATTTTATACTGAGCTTGTTATTACA
AATATATATTATTACATAGATTTTAGGAATGACTTGTTCATCTTGTGTTT
ATCTCATCGAGTCTAATGTTAAAAAACTGAATGGAGTTGAATCTGTTGTT
GTCGCACTATCCACGGAAATCGGAAAAATTAAATATGATCCTTCTGTTAC
TGGTAATTTATAAATCGGGATTACATAATATACAAGGTAATTAAAGATAA
ACTACCATTTTTTTAATCGTAAAAAGGACCTCGTAATATAATTGATGCAA
TTAATGGTATGGGGTTCAATGCAGAGGTTTTTAATCGTCAAAACGAGCTT
CGAAACTCAACTGCAGAATATTTAAATCACGAAAAAGAGATTCGAAAGTG
GAGAAATACTTTTTGTATTTCTCTTTTCTTTGGACTTCCTTGTATGCTTA
TTATGTTTTACTCCATGATAGTCATGTCATCTAGTGAGCATGTCCATGAA
GAAAATTGCTGTGTTGTACCTGGTCTATCGTTAGAAAATCTTTTATTATT
TATTTTATCAACTCCGGTCCAAGTATGTGACATTCTTATAATTGGGGTAA
TTGATCTTTAACCTTTTCATATTGTAGTTCATTGGAGGACGTCATTTTTA
TATTGCTGCTTATAAAGCATTGAAGCATGGAGCCGCAAATATGGATGTTC
TCATAATGCTAGCAACAACAATATCATATGCATACTCAGTTTGTACGCTT
TTAGCATCAATGATTCTTAAGGAAATACATCTCCAATGACTTTTTTCGAT
ACACCACCGATGCTTCTAGTATTTGTGTCATTAGGTAGATGGCTTGAACA
CGTCGCAAAAGTATTTTTATTCCATTATTTAAGATGTTATTCAAAAATGG
TTTTAAAAAAATTAAAAATGAATATATTTTTAGGCCAAAACATCAGATGC
CTTATCTAAACTTATATCTCTTAAAGCTACTGAAGCTGTTATTGTCACAT
TGGGCAATAATTTTGAAGTTACCTCTGAGAGACAGATTGATGTTGACCTA
GTGCATCGAGGTGATATTTTGAAGGTATAAGAATCGATTTAAATATTATA
ACAAATAAGACTTACTTTTGTTTATAGGTAGTACCTGGGTCGAAAATACC
AGTAGATGGAAGAGTTTTACATGGGATCTCACACTGTGATGAGAGTCTAA
TAACTGGTGAATCAATGCCTGTAGAAAAAACTGTTGATGCATTAGTGATT
GGAGGTTCTATAAATCAGAATGGACTTTTGTTTATATCCGCCACCCACAT
TGGAGAAGACTGTGCCTTAAGTCAAATTGTTCGTCTTGTGGAAGAAGCTC
AAACCTCAAAAGCACCCATTCAAAAATTAGCAGACAAAGTTGCTGGATAT
TTTGTTCCTATTGTTGTTTTTTCATCCTTGCTCACTCTTGTTGTATGGGT
AGTTATTGGATATATAGATCCAACACTTCTTCCCGTATCAAAAATGGAAA
GAGAAGGATTCAATTCAGAAGAAATCACTTGGCAATATGCTTTCCGGATG
GCTCTTACAGTTCTTGCAATTGCATGCCCATGTTCGTTGGGTATTGCGAC
TCCAACTGCTGTCATGGTTGGTACTGGTGTGGGTGCTAAAATTGGTATAC
TTATTAAAGGAGCGGAGCCTTTAGAAAATGCGCACAAAGTAACAACTGTT
GTGTTTGACAAAACAGGGACGATCACGCATGGCAAATCTTGTGTAGCGCA
ATTTGTATTACTTGTGAGTAATTCATTTATGTCTTTGGAAAGAATGTTTT
ACCTATTGGGAGCTGCTGAGTCAGGGAGCGAACACCCTTTGGCATTAGCT
GTCGTTAAATTTACTAAGTCATTTCTGGAAATTGATGAGATTAAAGCTTC
TATAAAAGATTTTTCTGCTGTTGCTGGTTGTGGATTAAAAGTGGTAGTTG
ATCTTAATAATAATACTGATGAATTTGCATTACAGAATTCAAACAATATC
AAAAACTTACATAACATTATCAACGGTCCCAGGTAACTTTGTAAATTCTT
CAATTAATTATGTAATAAATAATCATTGATCTATTTTCAGTAAATTAGGA
TGTATTTGTGGTTCAGAAATAGACGCAACTATACTCCGTAAGCCAGGCCA
TGAAATATCCAATGAGTCCAAAAAACAAATGCCTCTTATTGATGTGGGCC
AAGATGATGACTCATATAAAATTGGAAAGGCTTCAAATGAATCAACGATT
CTAATTGGGAATAGAAAGTGGATTCGAGATAAAAACTTTATTAATATTCC
AGAGGATCTTGAATTAAAGTTATTGAAACAAGAAGAGTTGGGACACACGG
CTATTCTTGCAGTAATTGATGGTATGTGATATCTGAGACTTTTATTTATT
AGGATATTCTTGCGCTTTTTACTTAATTACTGTTTTTTTGTTACTACCTG
CTTACATTAGCCTTTTATTATTCGATGTAATGATTTTTTTCTTTTTATAT
TGAAGGAGTGCTTGTGGGTATGTTAGGTATAGCTGACACTGTCAAACCTG
AAGCTCACTTAACAGTATATACTCTTAAAAAAATGGGACTCGATGTTATG
CTCCTAACGGGAGACAACCGTAAAACCGCTACATCTATTGCCCAACAAGT
TGGAATCTCTTCTGTGTTTGCTGAAGTTCTTCCGTCACATAAAGTTTCTA
AAATAAAAAAACTTCAGGAAAAGGGTCACAATGTAACCAATTTTCTATAT
GAAGTAAATCATGTTTTTACACATAAATTTTGTGTAGGTCGCAATGGTTG
GAGATGGTGTAAATGATTCTCCTGCTCTTGCACAAGCCAATATCGGGATT
GCAATTGCTTCAGGAACAGATGTTGCGGTAGAAGCTGCTGYCGMCGTTTT
GWTTCGAAATGATCTCTTWGATGTTGTGGCATGTCTGGYTCTTTCGAAAA
GAACAGTTAAACGCATTTGGATTAACTTCACATTTGCTTCCGTTTATAAT
CTGTTTGGAATACCCCTAGCAGCTGGAGTTTTTTCTCCTTTAGGTCTAAA
ATTACAACCTTGGATGGGCTCAGCTGCAATGGCTATCTCTTCTGTATCAG
TCGTTTGTTCTTCTCTTTTGCTTAAATTATATCGGTAAATCCCTATTAAA
AGGTCATATGTAGTTATGCTGATTTATTTAATTATTATTTTTTTATACAA
GTAAACCAACGCGGCCTCAGCTCGAAACTATTGAATACCTCAAAATTCTT
GAAGATAAAAGCCCTACAAGAAATAATCTAGATGATAATTTTGAAATAGA
AATGAGAGAT

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