EMLSAT00000011584, EMLSAT00000011584-707431 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011584
Unique Name	EMLSAT00000011584-707431
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s800	supercontig	LSalAtl2s800:203652..212492 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011584 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011584	EMLSAG00000011584-694350	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000051773	EMLSAE00000051773-760701	Lepeophtheirus salmonis	exon
EMLSAE00000051774	EMLSAE00000051774-760702	Lepeophtheirus salmonis	exon
EMLSAE00000051775	EMLSAE00000051775-760703	Lepeophtheirus salmonis	exon
EMLSAE00000051776	EMLSAE00000051776-760704	Lepeophtheirus salmonis	exon
EMLSAE00000051777	EMLSAE00000051777-760705	Lepeophtheirus salmonis	exon
EMLSAE00000051778	EMLSAE00000051778-760706	Lepeophtheirus salmonis	exon
EMLSAE00000051779	EMLSAE00000051779-760707	Lepeophtheirus salmonis	exon
EMLSAE00000051780	EMLSAE00000051780-760708	Lepeophtheirus salmonis	exon
EMLSAE00000051781	EMLSAE00000051781-760709	Lepeophtheirus salmonis	exon
EMLSAE00000051782	EMLSAE00000051782-760710	Lepeophtheirus salmonis	exon
EMLSAE00000051783	EMLSAE00000051783-760711	Lepeophtheirus salmonis	exon
EMLSAE00000051784	EMLSAE00000051784-760712	Lepeophtheirus salmonis	exon
EMLSAE00000051785	EMLSAE00000051785-760713	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774457	auto774457	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011584	EMLSAP00000011584	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s800:203652..212492+

protein sequence of EMLSAP00000011584

>EMLSAP00000011584 ID=EMLSAP00000011584|Name=EMLSAP00000011584|organism=Lepeophtheirus salmonis|type=polypeptide|length=1043bp
MWNMMCDVMPTISEDSISQRSSQFAGDEANFEQLMVSMLDERDKLVESLK
TEQDKSSELEMKAKDLEKERDSLERQMNQSLPQEFAALTKELNQARENVL
EKEEEISELKAERNNTRLLLEHLECLVSRHERALRMTVVKRQAASQSGVS
SEVEVLKALKSLFEHHKALDEKVRERLRVSLEKNSTLEEELDRAKDELQK
VKSGIVEKPNSEDNVDGSTESNGTXGSHSTIIKISSSSVDPEVIELRKQI
EKQSADLGNAHRNLSDLRSQKAELEEKLMQLTKDLHSNQELCKRLEIDFN
ENCAQKEDQEERISTLEKRYXNSQREATTLRDSNEKLQQELKNKEDQALL
CQEKIKAITEKLDISEQKLMEFASMPDIEEQLRDRMEALMQAQERQGTVE
DRCQRLEMELEEKSADLQKLSQRLKMNEEHNQRLSSTVDKLLSESNERLQ
VHLKERMHALEEKNHLSNELERLKKKLEETRCNKDEILKELQKSRLEIES
IKRQMLQQEIHFNIKQTEALTRNLSPSGNEMYAELTKNISNSQRTRVNND
TQGGSSSTNSDSQSQQKKWQHINNREIDNVDFEDNESIFTEVMSPSGHTD
AQTLACMLQEQLDAINNEIRLIQEEKQSTEQRAEELESRVGSIEHMNLAL
QHTNTPGSTLQGHQSYSISSSTTQSTTNVTVPPQPPPRTSRSSAAINIAS
STVSTPLSFDTQGSPPTSGTSTPKESQYSQKYHTLHLSAPSQEINREEAE
SQRRIMDGSPPTPRXLRLLQLSASQEELRRHELLDEAMKAGTPFALWNGP
TIVAWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHR
LKLRLAIQEMVSLTSPSAPQTSRTTLAYGLPQYRTTFMECLVDARMLDHL
TKKDLRTQLKLVDSFHRTSLQYGIKCLKLVNFDRDQLEERRHNADLPTET
KDVLVWSNEQIIQWVLSIGLKEYANNLLESGVHGALIALDEGFEHNSMAL
ALQIPTQCTQARQLLETEFAKMVHSGTNRRLDEEXATTRVSPS

mRNA from alignment at LSalAtl2s800:203652..212492+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011584-707431 ID=EMLSAT00000011584-707431|Name=EMLSAT00000011584|organism=Lepeophtheirus salmonis|type=mRNA|length=8841bp|location=Sequence derived from alignment at LSalAtl2s800:203652..212492+ (Lepeophtheirus salmonis)
CGATTGCTTTTCTCTGCTTCATAATAGAGTATCCTAAATTGGCAAAGTGG
GCTTGAATGACTGAAAAATATCAAGGTAGGGATTGAGGAAATGAAGATCA
TAGTAGATAATTATTTAGACATGTGAAAGAGTGTATACTATATGCTAATG
CAGTGATGATGAGAGTGAAAATGGAATGCAATCCTTATGAAAAGAGGGGA
TGAATGAGGACTGAAGTTGTCTGAGAAGTCAGCTGAAGTGTGGAAGAGAG
GGACTCAAGGGTCTTTAGTTCTTGAAAAAGGGTTGAGGGGAAAAGAGGGA
AGAAAAAGAGAAGGAGAGAGAGAGAGAGAGAGAGAGAAGGAAAGAAAGAA
AAAGAAGCTGAGCTAGAAATTAGAATCATAGAATCAGGGATTTGCTCTGA
CTATTCCAGCTTAGAATAATTTGGAAATGAGGAAAAGTGGAGATTGTTGA
TAATCCGATCCAGGGTTTGGATATAGGAAAGTGAAATAGGAGAAGAATCA
AGGATGTGGAATATGATGTGTGACGTGATGCCCACCATATCGGAGGATTC
CATCTCTCAGCGCTCTTCTCAGTTTGCTGGAGATGAGGCCAACTTTGAGC
AACTCATGGTTTCCATGCTGGACGAAAGGGACAAACTCGTGGAGTCCCTT
AAAACCGAGCAAGATAAATCCAGTGAATTGGAAATGAAAGCCAAAGATCT
GGAAAAAGAGAGAGATTCTCTTGAAAGGCAAATGAATCAATCCTTGCCAC
AGGTGCATTAGCTCATCCTTTGATGATTCAATAGTCTCTCAGTCAATTTA
GAATCCATTATTCTTTAATACCTCCTTATTAAATGTCTCATGAAATTCAA
TGCAATACTTCCTTAACAAATTAATTAGATAACTTAATTTATTTCTTAAG
TCTTTATTAAAAATTTACTTTTACAACTTTTTTAAATAGAATTTCCATTT
TTTTAACCATCGTGTGTGTAGGTGTACCATGAAATGTTATAAAAAGAAGA
AGGTTGCACTTTGCTTATGTAATAGTCCTAATATTAAGTAATGTGGAAGA
TATTAGTCATCCCAGTTCATGTACATTTTTGTGTTATATACACTGTCTAA
CTTAGAATTTCATGTATAGGAATTTGCTGCTCTGACGAAGGAATTAAATC
AAGCTCGAGAGAATGTCTTGGAAAAAGAAGAAGAAATATCAGAGCTCAAG
GCGGAAAGAAATAATACTCGTTTGTTATTAGAACATTTAGAATGTTTGGT
CTCACGGCACGAAAGAGCCTTGCGAATGACTGTAGTTAAAAGACAAGCAG
CGTCACAATCAGGTGTTTCTTCTGAAGTTGAGGTTCTCAAAGCTCTTAAA
TCTCTTTTTGAACACCACAAAGCACTTGATGAAAAAGTTAGAGAAAGATT
ACGTGTGTCACTGGAGAAAAATTCAACTCTGGAAGAAGAACTTGATCGTG
CCAAAGATGAGGTTGGTATAAAAGTTATATACATTTATAATGAATATCAT
TATTATCGTCTTCTAAATTTCAGCTTCAAAAAGTAAAAAGCGGTATCGTT
GAAAAACCAAACTCAGAAGATAATGTTGATGGTTCAACCGAATCTAACGG
TACGGAKGGGAGCCATTCTACAATTATTAAGATATCTTCTTCAAGTGTGG
ATCCAGAAGTAATCGAGTTAAGGAAGCAAATCGAAAAACAGTCAGCAGAT
CTTGGAAATGCTCATAGAAATTTATCCGATCTCAGATCTCAAAAAGCCGA
ACTAGAGGAGAAACTAATGCAGCTAACTAAGGATTTACATTCGAATCAAG
AACTCTGTAAAAGGTTAGAAATTGATTTTAATGAAAATTGTGCCCAGAAA
GAAGATCAAGAAGAACGAATTTCTACACTTGAAAAACGGTATCWCAATAG
CCAACGAGAAGCAACCACTTTAAGAGATTCAAATGAAAAACTTCAGCAAG
AGCTGAAAAATAAAGAAGACCAGGCATTGTTATGTCAAGAAAAAATTAAG
GCTATCACGGAAAAACTGGACATATCAGAACAGAAATTAATGGAGTTTGC
TTCTATGCCAGATATTGAAGAACAACTTCGTGATAGAATGGAGGCACTGA
TGCAGGTAAAGTATTGTGTTATGATTCAGTTTAAAAGTTCACAAAGTGTA
TTGATTTTCTTTATAAAGGCTCAAGAAAGACAAGGAACAGTTGAAGATCG
TTGTCAGAGATTGGAAATGGAATTAGAAGAAAAGAGTGCAGATTTACAAA
AATTATCTCAAAGGTTAAAAATGAACGAAGAGCATAACCAAAGATTATCG
TCAACTGTTGATAAACTTCTTTCTGGTAACTTGAAACCTATTAATCATAA
CAGACTGTTGTTAATTTTTATTCTTTAGAATCCAATGAACGACTACAAGT
TCATCTAAAGGAGAGAATGCATGCATTGGAAGAGAAAAACCATTTGAGTA
ATGAGCTTGAAAGACTAAAGAAAAAATTAGAAGAGACAAGATGTAATAAG
GTAAGTGTTTTTTTGTTTTGTTTTTTTGACCTAATAAATATCCAAGTTTT
TAATGTAATTATCATCAATATTTAAGGATGAAATACTCAAGGAATTACAA
AAATCCAGGTTGGAAATTGAGAGCATTAAAAGGCAAATGCTCCAACAAGA
GATTCATTTTAATATCAAACAAACTGAGGCCTTAACAAGGTAAATATTAA
GTTTGAAATCCTATTAATTATTCTATTATATAGCTGTTTTCGTTTTTTAT
CATATTTTCAAATTGTAACCAATAAGTTTGTTATTTTAATATATGTTTTT
TGTTTTTTTTTAATTTTATCAGAAATTTGTCGCCTAGTGGGAATGAGATG
TATGCCGAATTAACTAAAAATATATCCAATTCTCAAAGAACTAGAGTAAA
TAATGATACTCAAGGGGGCTCATCCTCGACCAATAGTGATTCACAATCCC
AGCAAAAAAAATGGCAACATATTAATAATAGAGAAATTGATAATGTTGAT
TTTGAAGACAATGAAAGCATCTTTACTGAGGTCATGTCACCTTCTGGACA
TACAGATGCACAAACACTCGCTTGCATGCTTCAAGAACAATTAGATGCAA
TAAATAATGAGATAAGGTATACTATTTGGAGATATTATCTGTATTGCTTT
TATTATAACCTTCTTTTCTGTATACAACAACAGATTAATTCAAGAAGAGA
AACAATCAACTGAGCAAAGAGCAGAAGAACTTGAATCTAGGGTTGGTAGT
ATTGAGCACATGAACCTTGCATTACAGCATACGAATACTCCTGGCTCTAC
TCTTCAAGGTCATCAATCTTACTCTATTTCATCTAGTACAACACAATCAA
CCACGAATGTTACTGTTCCTCCTCAACCACCACCACGGACTAGTCGTAGT
AGTGCTGCTATTAACATTGCATCTTCTACAGTATCAACTCCTCTTAGTTT
TGACACGCAAGGCTCTCCTCCTACAAGTGGTACATCAACTCCCAAAGAGT
CTCAATATTCTCAAAAATATCATACAGTAAGTTCTAATGTTATACTTAAA
GGACAATTATGTCATATTCTCTATTATTATAGCTTCATTTGTCAGCCCCA
AGTCAAGAAATCAATAGAGAAGAAGCAGAAAGCCAACGGCGTATTATGGA
TGGKAGTCCTCCGACTCCGAGGKCTTTGAGACTTCTTCAACTATCAGCGT
CTCAAGAAGAATTGAGAAGGTAATTTTTATATGAATTTTTGGGATACATA
TTGTCATGTTCAAAAAATTTCATTGGGGCCTCATACCTCTAAGCTCAACT
GTTTTCAAGTTTATTTTTTGGATTAGAAATCGTATTAATATACTTTTTTA
ATTTATATAACTGGTTCAAATACATTGTTCTATTAGTTCCTTCTACTGAA
AAAGAAAAATTATTAGCTTTTAAATAGAAAGTGCTGCGTTCAAAATTATT
CTTACTCGGCCCTTTTCAAAAGTTTGTAGTTAGTAAAATTTTCAAATATA
ACAGATAAGTTTATGAATACATATTTTATGATAAATCTATTTAGGAAGTA
TTTTTTCATACAAAATAGAACAGTTTAATCTATATACAAGATAATATCCA
ATATATATATATATTTTTTAAACATGTTACTTTGTATGACAAGAACATGC
GTATTCTATGTAATTTTTTTGGAAAATCATATTACGGTATGGCTAAGTAA
CACATTTTTTTCCGGAGAGATAACATTTTTTATCCAAAAAGGGAAGTACT
CTACTACATAGTTAATTGAAGTTACTATTTTTCATATTACACCACTTGAT
TACTGTAGTTATTGGTTATCCGTCTATTGCATATCTATATTAGCATTTTT
GACCATTTACGTTTAACGATGACAACGGAACCCTTTATATTAGAGGGGTT
CCATAGTGTCACTTTAGCCTTATGATCCCTATACTTATCAATTTGTTTTA
CGTAAGGACTGCGTAATGTTAGTTTGATCATCCTCTAACCATTCTATTAA
TACATATCTTTTTTGTTGTATAATTGAAGGTTTAATATATTCCCCTAAAA
ATAGTGCATCTGCACAATACCTCATGTTTTTTATATCAACAGTGTATTGA
TATTTATTAGTGTTGTCCCGTGAGCTGAATTTTACTGCATGAATATTTTA
GAGTTTCTAAAAAAAAAAAATACTCGAAGAATTACATGCTTTACTCGTTA
CTTGTCTGAAAGCTCGATACTCACCCTTACGCTTAATATTTTTTAATGAA
ATATTTAAAATTATCATTTAAAAACTTGTGTAGTTCTTTAGAGAAATCAG
TATTTTTAATTGAATATATTATATATGTACATATAAAAGGATCTTATAAT
AACAATAATACTAGTATAACAGAAGGACTATATTGCATTTAATAGAAGGA
CATTGTATACCATCATTACCTTATAATAAGGTACTGATGACCAACAAAAT
CCGGAAAAAACTGTAATAATATTACCGTAATATATTTAGTAGCGCGTTAT
ATTAATCCGTTACTGCATAATGTAATATATTACAGTAACGCGTTACGCCC
AACACTGCTTGTAACAAACATATTTTTAGTGGAGCCGATGTTTCTTAATA
TGAATGCATATTAATGATAATATAAAGAAAAAATGGACGGTTAAGTAATT
CCAAACAATATCGAGTACTCCCGCTAGTCTTTAAAAAATCAAACAAAGAT
TATTTTTAAAACAAACTGGAATTATGAGTTCACATTTCAATCGATGGGAA
AACATAAATTCTAAATTTCACAGATAAAGGGCGTCACAGTCTATAAAGAT
TTACATGTTATAATGGGATCGAAAAAGAAAAATAAGAGTTTTCCCAAGTT
TTGACGAGTTCCGAGTAATATTCTGATGTTTATTGCCTAGAGCCTAGTTT
TTTGTGTCTTTTTTTTTATTTACTTCATAGACTCGAGTACCAATTTACAA
GTTTTGCTCGTTGCACATCACTAATATTTATATATGAAATGTTACACTCT
TTATAATGCCTTCTGACTCTATCTTGACACTTTCCTATAAAAGATAAATA
CATTATGCTCAAACAATAACTTGAAGGTAATGATTGCGTTAATTGATTTA
GACAGTACATTATTATGACGTAAAATCTTTTTTTTTTAAATTCATTTGAT
TCTACAGCAGAGTTGTAAAATATATTAATGNATTCAAATGAGCTTTTTCT
GACGCCGGCCAAGAGTGTTTTTGTACGTCTATATGGAGTAATATGTGGTA
GCTCATGGAAGACTATATTTCTCCTTGTACTTTCTTTGAAGGGGGGGGGR
TCATTATGAAGATAATAAATCACATTTTTATACTGCTCTATGTACTATAA
TTGTAAATTCTCAAAAAGTGAGGGGCCATTACAACCCTACCCTTACCCAC
TGTTGCATAACCTCTCAATATTTAGCATAATCCAAGTTTTGATTCCCCAT
ATGCCTTAGAAGGCTTTGTTACTTTTCATAATTTTTGTTATATTTATATC
CGATTCAGGTGTCAATTTTGGCTTTCAACCACGTATATACTTTTTAAATT
GTAGAAAGTTTAAGTAATGCATTTGTCTGTTGTCACTGAGTCGGACTTAG
GAGAGGCACTGATCTCCAGGCCTTTAAAATTTTTATGATTAAATATGTAT
TTCCTTTGAAATGTAGATATAAAATCCAAAAAATATATTTAGGTTAAAGA
TAGGTAGCAGCATTACATAAAAAAAATGGTTGATGCTATGCATAACTGTT
ATAATCTCTGCATTCTTTAACTACCTACATATTATGTAGAAAGTTTATTC
GCGCTCATCACGCAAATCTATTTTCTTTAACGGCCTAATATCTTGGTTTA
TTGTTTCGCTGGTATTTAAATCACATTCATTAGTAGCTATGTAATTATAA
TCTTTGAACGCGAGTCTCTCGTTTGTCAAAAGATATTTTGAAGCATGACT
GGAAATAGTTTTCCTTAACATAGTTGTTCAAAGCTATATATGTATGGAAT
AACTTGTTAAATATATTTTCAGGACTTCGATGGAGGATAGTTCTCATTCT
MCTCCATCACCGATGTCATCGGCAGCATCTAGTCAAGATTCCCTAAATCG
AGGTCCTTACTTCGCTAATCAGTCAACTTTACCTATTACACATCAAGCCT
CTTCAATGAAGAAGAAGGGTGTCAAATCAACACTAGGAAGAATTTTTGGT
AAAAAGGATAAACAAATCAAGTCCTTAAAAATGCCTCTATCGATGGGAGG
GGGGGATTTACTGTTGAATAGTTCAAGCATACATAATTCTCTTACACMCT
CACCATCAGCGGCTGGAGGATTTAACCAACTATCGAGTATAAGTGATGCA
AGCAGTAATTGCGCTGACATATCAGTTTCTGATAGCATCCCTTTATTGGG
ACTCACTTCAGTATCAGCCAAAGGAGATTTTGATCGAAGGAAGAAAAAAA
AGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGTTGTTGAATATGATTTGTTTGTTTTACAAAATTTATGTCATTTTAATT
TTTATGTACAGACATGAACTTCTTGATGAAGCAATGAAGGCTGGCACTCC
TTTTGCACTCTGGAACGGACCTACTATAGTAGCTTGGCTCGAATTGTGGG
TTGGAATGCCAGCATGGTACGTTGCTGCATGTAGGGCTAATGTTAAATCT
GGCGCCATTATGTCTGCACTCTCTGATACGGAAATTCAAAGAGAAATCGG
GATTTCTAATCCTTTGCATCGTCTTAAACTTAGACTTGCAATTCAAGAAA
TGGTATCTTTGACAAGTCCTTCTGCTCCGCAGACTTCTAGAACAACGTTG
GCTTACGGTGACATGAACCANTGAATGGATCGGTAATTACTGGCTGSTAT
CCTTAGGMATGAATACATTTTATATAKATAATTCTTCCTTATTCCATTAT
TTGTCTCAATAATTTCTCAAATAGGCCTACCACAATATCGTACAACATTC
ATGGAGTGTCTTGTTGATGCAAGAATGCTTGATCATTTAACGAAGAAAGA
TCTCCGCACACAGTTGAAATTAGTTGATAGCTTCCATAGGACAAGCTTGC
AGTATGGAATCAAGTGTCTTAAACTGGTTAACTTTGATCGTGATCAATTA
GAAGAACGAAGACATAATGCTGATTTGCCTACAGAAACTAAAGATGTTCT
CGTATGGTCTAATGAGCAAATTATACAATGGGTCTTGTCCATTGGCTTAA
AGGTTTCTATAATTTTATTTATGATTGTGGAGTAAATAAATTACTCATTT
TATATTTTAGGAATATGCCAATAATTTATTGGAGTCTGGAGTCCATGGTG
CATTGATAGCTTTAGATGAAGGATTTGAACATAATAGTATGGCGTTAGCA
TTGCAAATCCCTACTCAGTGCACTCAGGTAATTTATTTATACGCATAAGG
TATATAATAGAGATGGTAATAACTTAATTATTTCATTTTCATTTTAGGCA
CGGCAGTTATTAGAAACAGAATTTGCAAAAATGGTGCATAGTGGTACAAA
TCGTCGCTTGGATGAAGAAKCTGCCACTACAAGGGTATCGCCTTCTTGAA
GTGAATGTCACTACTAACTCCTGCAATTAGGAAAATTAATGAATATATGT
ATAATCTCAGTTCGGCTTGAAGTCAAATGCATTCAAAAGGCTGTGAAAGG
ACGTAATTTGCATTTTTGTCCATGTATTATAATTAATTACTTTTTTGGAG
TATAGAAAGATTAACATGGTTATCGACATCCTCATCATCTCCATAAATTA
TAATATATGAAATATATAATATTATATATACCTATACTCCTTCTTAACTT
CGGAATATCATTTATTGCTGAGCCAATAAAAATATACTCAAAGACTGTTG
ACTATCGCATATTGTTAAGAAATTTTTCTCGGAAGGATTTTTGAGGAAGA
TAGTTACGCATTTTCTTCGTCGAGGACTTCTTCCCATTTGCCCCTTCTAT
CATTATTTTTACCTTGCTTAGAAATAAGAATGGCAAAAGGAAATCAAAAT
TTTTAAAAGTTCCTCATTTATTTTATATTTTAATGAAATGTATTATTTTA
ACAAAACATTTATGCCATATATACCTTATATATTAAAAAAAAAATATATA
TATACATGTTAGAATCGAGTAAAAGAAAGATAAACTCAAGCAAAACAACA
AAAAATATTATTCAATCATGTTTTTTTTTTCTAAGTTTTGTTTTATTTAT
TGAAAATATTATGTTTTTAACAATAAAATTAAATAATCGTT

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