EMLSAT00000011618, EMLSAT00000011618-707465 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011618
Unique NameEMLSAT00000011618-707465
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s802supercontigLSalAtl2s802:83392..84519 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011618 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011618EMLSAG00000011618-694384Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000051964EMLSAE00000051964-760892Lepeophtheirus salmonisexon
EMLSAE00000051965EMLSAE00000051965-760893Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771693auto771693Lepeophtheirus salmonispolypeptide
EMLSAP00000011618EMLSAP00000011618Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011618

>EMLSAP00000011618 ID=EMLSAP00000011618|Name=EMLSAP00000011618|organism=Lepeophtheirus salmonis|type=polypeptide|length=285bp
MVKTCSVVYFDKKICXDVSLSSMMIVSELQNGDIRFDCSICRSRYKHHPS
LFRHFKCAHKEQYEQKVALREHLKAEREVLKMLGLPYMRRKNQKRNTKGR
KVNKENISPLPEKPNDSIPTQLSNLGTLVPLDQKYMLPVSNSHYYLCTNC
DQQFPSQQQLDQHGCECQVGANLSVILDPILDDMVKDEKELFLCGICGIN
MENIDNFSAHMRINHEYTELMGIESPPETVVYANTSALVNPNLISKNNCE
IYNICEVCEEVXLKELMDDHQCYVREEIMQLXNYN
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mRNA from alignment at LSalAtl2s802:83392..84519+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011618-707465 ID=EMLSAT00000011618-707465|Name=EMLSAT00000011618|organism=Lepeophtheirus salmonis|type=mRNA|length=1128bp|location=Sequence derived from alignment at LSalAtl2s802:83392..84519+ (Lepeophtheirus salmonis)
AATAGAGTAATTTTAGATATGATTATGAACAAAACCATGTACATAAATCC
ATGAACAAGTTGTGATCATATCATAATAAGAATCAATATAGTAGAGAAGT
TCTTTTATATTTCAAACACGATAAGCTCTTAACTTGCATCATGGATAACG
AATAAACATTAGGTAAAGAGTTCTTCATGTGACAGTAGGCGGAGGCAAGA
GAATAGATAAGTGAGTAATTCGTTTATTGCATAATTATCCACCATTTAAC
CCTCTTTTTTTACATTTAGAATGGTGAAAACTTGCAGTGTCGTTTATTTT
GATAAAAAGATATGCGKGGACGTTTCTCTTTCGTCCATGATGATCGTATC
CGAACTTCAAAATGGAGATATCCGTTTTGATTGCTCCATATGTAGAAGTA
GATACAAGCATCATCCCTCCCTGTTTCGACATTTCAAATGTGCTCATAAG
GAGCAATATGAACAGAAAGTTGCTCTTAGAGAGCATCTCAAGGCTGAGAG
AGAGGTTCTTAAAATGCTGGGGCTTCCTTACATGCGGAGAAAGAATCAGA
AAAGGAATACCAAGGGTCGTAAAGTAAATAAAGAAAATATATCACCATTG
CCTGAGAAGCCAAATGACTCTATCCCAACACAATTATCGAATTTGGGGAC
CCTTGTCCCATTGGATCAAAAATATATGTTGCCCGTGTCAAACTCTCACT
ACTACTTATGCACGAATTGTGATCAACAATTCCCTTCACAGCAACAACTG
GATCAGCATGGATGTGAATGCCAAGTAGGAGCGAATCTCTCTGTTATTTT
AGATCCAATTTTGGACGATATGGTTAAAGACGAGAAGGAACTCTTTCTAT
GTGGTATTTGTGGAATTAACATGGAAAATATTGACAATTTTAGTGCTCAT
ATGCGAATTAATCACGAATACACAGAATTAATGGGAATTGAATCCCCTCC
AGAAACAGTTGTCTATGCAAATACGAGCGCATTAGTGAATCCAAATCTAA
TTTCAAAAAACAATTGTGAGATTTATAATATCTGTGAAGTGTGTGAGGAA
GTTMTTCTCAAAGAGCTGATGGATGATCATCAGTGCTATGTTCGAGAAGA
AATTATGCAATTAWYTAATTATAATTAA
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