EMLSAT00000011737, EMLSAT00000011737-707584 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011737
Unique NameEMLSAT00000011737-707584
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s816supercontigLSalAtl2s816:222130..223203 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011737 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011737EMLSAG00000011737-694503Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000052536EMLSAE00000052536-761464Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774804auto774804Lepeophtheirus salmonispolypeptide
EMLSAP00000011737EMLSAP00000011737Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011737

>EMLSAP00000011737 ID=EMLSAP00000011737|Name=EMLSAP00000011737|organism=Lepeophtheirus salmonis|type=polypeptide|length=357bp
MSQSRLGLAEGWGHIRSIRFNQDGSCFVCAFDDGIRVYNTEPVREKAHLK
KADTFGSIEIAEILYRTNLIAMVSSSGGVYAENAVMIYDDLQSKMVLEFT
FPEGVVNVKLRRDKLIAITPKAIHVFSFPQNPQRLYTLETRDNPRGLCDA
SPAKAERGIMIFPGYKPGSLQIVDLDTTEQKSSSAPVTLNAHKTELWCLA
LNTKGNLIATASKKGTLIRIWDSLRRVMLVELRRGSDQADLYCINFSSDD
QWLCCSSDKGTVHIFALQDYKLNKRSALSSLGIPGAYAGSQWSLANFTVP
QECACVCTFGKQGYIYAVCLDGSFHKYHFCPDGVCNQNAYDVITELCEDC
DWENMRR
back to top

mRNA from alignment at LSalAtl2s816:222130..223203-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011737-707584 ID=EMLSAT00000011737-707584|Name=EMLSAT00000011737|organism=Lepeophtheirus salmonis|type=mRNA|length=1074bp|location=Sequence derived from alignment at LSalAtl2s816:222130..223203- (Lepeophtheirus salmonis)
ATGAGTCAATCCCGTTTGGGATTAGCGGAAGGATGGGGTCACATCCGTTC
TATCCGCTTTAATCAAGACGGATCCTGCTTTGTATGCGCCTTTGATGATG
GAATACGAGTTTACAATACAGAGCCAGTACGGGAAAAGGCCCATTTAAAA
AAAGCGGATACCTTTGGATCAATCGAAATCGCTGAGATTCTCTATCGAAC
TAACCTCATTGCAATGGTCTCTAGTTCAGGAGGCGTATATGCAGAGAATG
CCGTCATGATCTACGATGATCTTCAATCCAAAATGGTCTTGGAATTTACT
TTTCCCGAAGGGGTTGTAAATGTCAAACTTCGTAGGGATAAACTCATTGC
CATTACTCCAAAGGCAATCCATGTTTTTTCATTTCCTCAAAATCCACAGA
GACTCTATACACTTGAAACAAGAGATAATCCTCGAGGACTCTGTGATGCG
AGTCCTGCAAAGGCTGAGAGAGGGATCATGATTTTCCCTGGCTACAAACC
TGGATCCCTACAAATTGTAGATCTGGACACTACGGAACAAAAAAGTAGTT
CTGCTCCTGTAACTCTGAATGCTCACAAAACTGAGTTATGGTGTTTAGCC
TTGAATACGAAAGGAAATCTCATTGCCACAGCTTCTAAAAAAGGAACTTT
AATTCGAATTTGGGATTCACTTCGWCGAGTCATGCTCGTTGAATTGCGAA
GAGGCTCTGATCAAGCGGATTTATACTGCATTAATTTTAGTTCTGACGAT
CAATGGCTTTGTTGCTCTTCAGACAAAGGGACTGTACATATATTTGCCCT
CCAGGATTACAAACTGAATAAACGTTCTGCATTATCTTCTCTAGGGATTC
CTGGTGCTTATGCAGGTTCACAATGGTCGCTTGCAAACTTTACTGTGCCC
CAAGAGTGTGCTTGCGTTTGCACATTTGGCAAGCAAGGATATATCTACGC
TGTTTGCCTGGACGGATCTTTCCACAAATATCATTTCTGTCCTGATGGCG
TTTGTAATCAAAATGCCTATGATGTTATAACAGAGCTTTGTGAAGACTGT
GACTGGGAAAATATGAGACGATGA
back to top
Add to Basket