EMLSAT00000011743, EMLSAT00000011743-707590 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011743
Unique NameEMLSAT00000011743-707590
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s816supercontigLSalAtl2s816:282974..284014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011743 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011743EMLSAG00000011743-694509Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000052558EMLSAE00000052558-761486Lepeophtheirus salmonisexon
EMLSAE00000052559EMLSAE00000052559-761487Lepeophtheirus salmonisexon
EMLSAE00000052560EMLSAE00000052560-761488Lepeophtheirus salmonisexon
EMLSAE00000052561EMLSAE00000052561-761489Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775801auto775801Lepeophtheirus salmonispolypeptide
EMLSAP00000011743EMLSAP00000011743Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011743

>EMLSAP00000011743 ID=EMLSAP00000011743|Name=EMLSAP00000011743|organism=Lepeophtheirus salmonis|type=polypeptide|length=271bp
MSAFIDEFVEFAEDGRVHIKEDAIDRIDSQLSNKSFLADILQETPRNLKE
KLKNRGDPVPRVILEDTPPSSAPPEKNVVNRLTLSSKSNRFFQVHPAPSN
KGQDKLESVSPESEWEENCRIGILESSNLKEAMNVLVRXAXXTRXSSPNT
NHNNKVYPLNXNLENTNSKPAIITDSLMVNKIEGAGSRSSVYLQGENRXL
LPDNANGIHIIEGTDTKYFLGVIDIFKRYSTMQKFARVIKTVLNCSDDHS
SAPPDIYAKRFIEFIETHLES
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mRNA from alignment at LSalAtl2s816:282974..284014-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011743-707590 ID=EMLSAT00000011743-707590|Name=EMLSAT00000011743|organism=Lepeophtheirus salmonis|type=mRNA|length=1041bp|location=Sequence derived from alignment at LSalAtl2s816:282974..284014- (Lepeophtheirus salmonis)
ATGAGTGCGTTCATTGACGAATTCGTAGAGTTTGCAGAGGATGGCAGGGT
TCATGTACGTTTAATTTACATGCAATGCTCAAATGAAAGATTTTATTTAT
GATCCCTTTTAGATTAAAGAGGATGCAATTGATAGAATAGACTCCCAACT
CTCAAATAAGAGTTTTCTGGCGGACATATTACAAGAAACGCCAAGGAACT
TAAAGGAAAAGTTGAAAAATAGGGGAGATCCCGTACCCAGGGTGATTCTT
GAAGATACTCCCCCATCCTCAGCACCTCCAGAAAAGAATGTTGTCAATCG
TTTAACCCTATCCTCCAAGTCCAATCGTTTCTTCCAAGTTCATCCAGCTC
CAAGCAACAAAGGGCAAGATAAGCTGGAAAGTGTTTCTCCAGAGAGTGAG
TGGGAAGAAAACTGTCGAATAGGTAAGAGAATACTGCATCAAAATCTAAA
TATTATACCCAAAACATAAATAATTACATTTACTTTTTCTCATCCCCTAT
AAAAGGTATTTTAGAGTCTTCTAACCTCAAGGAAGCTATGAATGTCTTAG
TKCGCRCAGCYGMGCYAACAAGASCATCCAGTCCTAATACTAATCAYAAC
AATAAGGTGTATCCACTAAATYGCAATCTTGAAAATACGAATAGCAARCC
TGCCATCATCACAGACTCTTTAATGGTGAACAAAATAGAAGGAGCTGGAT
CCAGATCTTCAGTTTATCTGCAAGGAGAAAATCGAAGKCTCCTTCCAGAC
AATGCCAATGGAATACACATAATTGAAGGAACAGACACTAAGTAAGCGAT
TTAGTTAGCTCAATCATATATTTTATACTAGGATATAAAAATATTAATTC
TTTTTTTTTTTATATATAAAATTAGATACTTTTTGGGAGTCATTGACATA
TTTAAAAGATATAGTACGATGCAAAAGTTTGCAAGAGTTATCAAAACAGT
ACTCAACTGCAGCGACGATCACTCCTCAGCACCACCGGATATATACGCCA
AAAGATTTATTGAGTTTATAGAGACTCATTTAGAATCTTAA
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