EMLSAT00000011803, EMLSAT00000011803-707650 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011803
Unique NameEMLSAT00000011803-707650
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s824supercontigLSalAtl2s824:287074..289093 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011803 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011803EMLSAG00000011803-694569Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000052824EMLSAE00000052824-761752Lepeophtheirus salmonisexon
EMLSAE00000052825EMLSAE00000052825-761753Lepeophtheirus salmonisexon
EMLSAE00000052826EMLSAE00000052826-761754Lepeophtheirus salmonisexon
EMLSAE00000052827EMLSAE00000052827-761755Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775885auto775885Lepeophtheirus salmonispolypeptide
EMLSAP00000011803EMLSAP00000011803Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011803

>EMLSAP00000011803 ID=EMLSAP00000011803|Name=EMLSAP00000011803|organism=Lepeophtheirus salmonis|type=polypeptide|length=545bp
MKSHTSHTDQRGSTVLTPIANVWQNVRDTSETSNSYSKQKQIFATLFASL
GCFLNGTSIGYTGVAIPSLMNGTFDVYGFPADYSQQQVSWITSLMYVGCI
LGGLFSRFFMDFMGRRRTLLYIVNTFYLSGHILIFFGSCAEMFYIGRILN
GIALGLELCVASVYIVEISSTDMRAILGYFIQFMGTLGVLYSFTMGGLFF
NWNGLTAASGVFIIPFILATYFMPESPHWLLLKGYEFQAVQSLEWLRGRD
DAAVELEILKIKKYLVLKENEKLSGLGLIKESPKTLLISLTMMFFWMFSG
YSLYIVYSVSIFEMVGSSIKPSSATIIVGLVLLLSCLVSVYTVSKWSRKW
MMIVSMFLIFFFNLIIGFCMFLHERAKSQDYNGSIEKHLFISEEINSLNE
TMVREEYLNLSQSVGVSIGWLPLLCVIGIIFFGNVGQATLIWIVTSEITP
PKSRNIVNSILISFAFFCGFLVTKTFVDFVEIFKESKTFWIYSGIAVFGT
FFIMIFVPETKGKTNNEMRIYFGKGPKKHSIRSKHSNEIPLQEIS
back to top

mRNA from alignment at LSalAtl2s824:287074..289093-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011803-707650 ID=EMLSAT00000011803-707650|Name=EMLSAT00000011803|organism=Lepeophtheirus salmonis|type=mRNA|length=2020bp|location=Sequence derived from alignment at LSalAtl2s824:287074..289093- (Lepeophtheirus salmonis)
TATAATGAACTAAAAGAACTCAATAAAATAAACTTATTTAAAATGAAAAG TCACACTTCCCATACTGATCAAAGAGGTTCAACAGTTCTCACACCAATAG CAAATGTATGGCAAAATGTTCGGGACACTTCTGAGACATCAAATTCCTAT TCGAAACAGAAACAAGTAATTTTAAGCTTAAAATTAACATAATAACATAT AAATTATATCGTTTTTATGTAATTATGTTGTTGATGAAAGGTTGAGATAT TTTTTTACAAATAAAAGTTCCATGGAGCTTCAGACAAGAAATTAAAAATA TGAATTTCCAATTCGCAATAATCTCTATAGACTATATCATTAATACTCCA ATTTTGATGATATTAATTATCAAATCATATTTCAGATATTTGCAACATTA TTTGCAAGTTTAGGATGTTTTTTAAATGGAACTTCTATTGGTTATACCGG AGTAGCCATTCCTTCTCTCATGAATGGAACCTTTGATGTGTACGGATTCC CAGCAGATTACAGCCAACAACAAGTTTCTTGGATAAGTAAAATATAGTAT AAAACAGGTATTTGAATATTTGATTTTAATTTAGAGTAATTTTGCAGCAA GTTTAATGTATGTTGGATGCATTCTGGGAGGGCTATTCTCAAGATTTTTT ATGGATTTCATGGGCCGACGCAGGACCCTTTTGTATATAGTGAATACATT CTATTTATCAGGACACATATTGATATTTTTTGGGTCGTGTGCTGAAATGT TCTATATTGGACGGTAAAATATGCTCAATACTTGTTTTTATTAATTTCTG AAAAGTTTATATGCTCGATAAGAATTCTGAATGGAATTGCGTTAGGATTG GAACTATGTGTAGCTTCAGTATATATTGTAGAAATATCGTCAACGGATAT GCGGGCAATCTTAGGATATTTTATACAATTTATGGGTACACTGGGAGTTC TCTACTCATTTACTATGGGAGGCTTGTTCTTTAATTGGAATGGACTTACT GCTGCAAGTGGTGTGTTTATTATACCTTTTATCCTTGCTACATATTTTAT GCCAGAGAGTCCTCATTGGCTTTTATTAAAGGGGTATGAGTTTCAAGCCG TTCAGTCGTTGGAATGGCTTCGGGGACGGGACGACGCCGCGGTAGAGTTA GAAATATTAAAAATAAAAAAATATTTAGTTCTTAAAGAGAATGAAAAGTT ATCAGGTCTTGGACTAATAAAAGAGTCACCCAAAACATTATTAATATCTC TTACCATGATGTTTTTTTGGATGTTTAGTGGATATAGTTTATATATTGTT TACTCAGTCAGTATATTTGAAATGGTTGGAAGTTCAATTAAGCCAAGCTC TGCGACAATCATTGTTGGACTCGTTCTTTTACTTTCATGCCTTGTTTCAG TTTATACGGTTTCAAAATGGAGTAGAAAATGGATGATGATTGTATCTATG TTTTTAATATTTTTTTTCAATTTGATAATTGGTTTCTGCATGTTCCTACA TGAGAGGGCTAAGAGCCAAGACTACAATGGTTCTATTGAAAAACACCTTT TTATCTCTGAAGAAATAAATTCTTTAAACGAGACCATGGTGAGAGAAGAA TATTTAAATCTTAGTCAGTCAGTCGGAGTTAGTATTGGATGGYTACCTCT TCTTTGCGTTATAGGTATAATATTTTTTGGAAATGTGGGTCAAGCTACCC TAATATGGATTGTTACATCCGAAATTACTCCTCCAAAATCAAGAAACATT GTCAATTCAATACTAATTTCCTTTGCATTTTTTTGCGGGTTCTTAGTCAC GAAAACTTTTGTGGATTTTGTTGAAATTTTCAAAGAATCAAAGACTTTTT GGATATACTCTGGAATAGCTGTGTTCGGAACTTTTTTTATCATGATTTTT GTTCCAGAAACAAAAGGGAAAACGAACAATGAAATGCGAATATATTTTGG AAAAGGACCGAAGAAACACTCAATTAGATCTAAACATAGCAATGAAATAC CTCTACAAGAGATCTCTTAG
back to top
Add to Basket