EMLSAT00000011847, EMLSAT00000011847-707694 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011847
Unique NameEMLSAT00000011847-707694
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s831supercontigLSalAtl2s831:293890..301408 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011847 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011847EMLSAG00000011847-694613Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053001EMLSAE00000053001-761929Lepeophtheirus salmonisexon
EMLSAE00000053002EMLSAE00000053002-761930Lepeophtheirus salmonisexon
EMLSAE00000053003EMLSAE00000053003-761931Lepeophtheirus salmonisexon
EMLSAE00000053004EMLSAE00000053004-761932Lepeophtheirus salmonisexon
EMLSAE00000053005EMLSAE00000053005-761933Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776025auto776025Lepeophtheirus salmonispolypeptide
EMLSAP00000011847EMLSAP00000011847Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011847

>EMLSAP00000011847 ID=EMLSAP00000011847|Name=EMLSAP00000011847|organism=Lepeophtheirus salmonis|type=polypeptide|length=1500bp
MGSKSVCHTRSELLELCRHLRQEKLFVENEKASLRDLNERVKKASQDLAL
SAWTARAQRVNLDELLLKAGDPSSSVLXANLVKKTHFQDAYKMLQHHEGF
TKCVWTSIPSPNARGNQRKFHTCNLFLIRRLEEVECATFSGLYGSCFMAE
DEVLTLELLHHLMSAQLASSPNPRKILRAGKCSFSRIYKSFIEEIFSTKL
FLTTALFEPILSLLTEDEIFLDIDPSKALIRFPPSERKKKFGIEGTPEYQ
KRLKDHREFIIKKLENITRKFINGIQDNIRSFPPSLSRLLRAMYSLLIKS
FELKEVHAICFDAIFYLFICPAIVDPNPVGIIDTPVSYIARSNLMQVAHI
LQVLCMQKWEEIDPKHMDLFSRFDKDSMSSIFENILELGLSNNEESIRKP
LTESNTFAGMGMSAGTAAASNFGFNDGSKLSRLAVLMTKSQLNQLVLFLR
HIRDINNENKCDNLLPSSMANELTALLAPLPEIIPGGLNGVHENKMEEIP
VSKSSQSKNSLSARLSAMKNGSNSHESHPLENNFHHRLHQEADNVLVIPL
FDPSTSYDLPGLLSEEQVLSRSRQNSRVRMTLPNSDGSGNEVLEKRTRFS
LSQDEGSIGNTSDNLEAISEAXSNHSATSSLEXGDDQEDEDNPIIDNLSD
MVSANVSGRGTPNVSGRDTPSSQVEGVPDDDEVIRSGRNEGEEDEARGAI
GGMVGLRTGQASRGHRHIPPNKSGQADLEEKFGRFEIKPQIKSRGSGVGL
AGEGGDETVSLISDTWSTDVLASDTETLGEILTTSSDRFPHNNQNFADMD
PFSRNLILEEFATSSSAGAAAALPQRMSGIQPSMPSDSTSVNLLDVGDTA
SEAWSIDVLDGDRESLCLGELDIEYISSTVSAEDNQYMEGISQSGRNTDI
LLVDDNSPVANRAEARGNNLSRPSRDAAIEQWACSSGVGNIEHQDGAIRR
GSDSSSSAAXAAQXPTSSKLPLGMEKAPLEDPNQATLSSHLSAASIASSS
GSSGDAADSNINASSRKNVLVPSSSTGAIPKCANPDKKSGRSEKFSFKNW
KLPKISRSRSSVESLRSSSDKCFSSHSNSLDNPSHSVDGPPLGSLQRSHE
SSDDILNKYRNKKPVAVGNLIDITDSLAEEEVDPRLIIDHNNLENCYAFQ
DAKRKLRLTLSSVDLSMMPDICHASSVEPEVIWLLKVQLSEALNLQDRNF
IAQLHETLRCLSLFKKDGVSRILNSLKEEYKRRAPYMAYLVRCRQGLLCT
LSRQERLLSRMNIDRDVCASYLVYVVVRIFLENREKRLHHFVQEFKELTV
PDEKTALMNSFLALMNKELEHDPIWSSVCSTEQLKLSNIAIERSITSHIY
FHAMYPNGEADINRDEVLSEHIRKLGEIITPSHKCLRIPRQYHYEQPWPS
AQAEIRRLAAFKTPAXKVSCIKRASQTIMNLLSLGSSXGVPAADDFIPVL
VFILIKANPPSLLSTVQYVENFYGERLCGEDEYWWXQTXXAIEFIKTMDY
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mRNA from alignment at LSalAtl2s831:293890..301408-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011847-707694 ID=EMLSAT00000011847-707694|Name=EMLSAT00000011847|organism=Lepeophtheirus salmonis|type=mRNA|length=7519bp|location=Sequence derived from alignment at LSalAtl2s831:293890..301408- (Lepeophtheirus salmonis)
ATGGGTTCCAAGTCCGTGTGTCACACCCGTTCGGAGCTGTTGGAGCTCTG
TCGTCACTTGCGTCAAGAGAAGCTCTTTGTGGAGAATGAAAAAGCCTCAC
TCCGGGATTTGAACGAAAGAGTCAAAAAGGCATCGCAGGATTTGGCGCTG
TCTGCATGGACCGCTCGAGCACAACGCGTTAATCTGGATGAACTTCTTCT
CAAGGCTGGGGATCCTTCGTCTTCCGTCCTTSGMGCCAATCTAGTTAAAA
AAACACATTTCCAAGACGCTTACAAAATGCTCCAGCATCACGAAGTAATC
TATTTTACTCTTCCAGGGCTTTACAAAGTGTGTCTGGACGTCAATTCCAT
CTCCAAATGCTAGAGGCAACCAGCGGAAGTTCCATACTTGCAACCTTTTC
TTAATTAGGCGTTATATATAATCATGAATGAAAGGGGATTTGAAGTGTAA
AACACCGGTTCGTAATTGACCAAGACATTATAGCATTATTAGAACGTTTT
CACGCCCCTTAGCATTCTTCATCTCTCCCATTTTAGGGAGCCAAGTGAGA
CCAACAAATGAAAGGATATATCTCAACCCTCTATTCCCTAGTTTTATTGT
AAATATATCTGACCCTAATATCTATTACAAATAGAACAATCATATTTGGA
CCTTACACTGAGCAAAGAGTTTCTAATTATGCTACTTTTCTCGTCTCTAA
GGTGTAATTTGGATTATTTTCAAATACCACTGTTGATCATTCACTTCAAT
TGATTCGTATTTTTTATTTTTTTTATTCATAAAAGCCATTTGATTGATTC
AAAATCTGTTCATTTTATGTAGGTCAAATATCAACTTTGAGCAGCCCTCA
ATTATAATGCAATTTATGAATGTTAGTGAAAATGCTCTATAAATTGGTTT
TTTGGCAACAAGCCGCTTTAAATATTTTAAAGTTTGATCCTCACTGTATT
CTATAATTGATTATTTTAGTCTTATTGAAACTCTTCAGTTAACATAGAAG
TACTGGATGACTCCATACAAGATTTGGAGGGATTGTTGTATGAATAACTA
TATTTCCCATTGTTTTGGTCAATTAACTACCGGTTTTAAAAAAGGCCCTT
GCTTTTGCTCACTCTATGTATTTCAAATCTGGAGTTGTAATTTAGACAAT
TACCACTTCCAAAGATCTTGAAAATAGGCGGAAGTCTCATTATGTATGGA
AGTTGTAGTGTTTTTACATGGAACGACTACAAGTACTTGATACTCTATAA
GAGACGAATACACAACCTTCTAAACATAATGAGACTTTCCATCTACGTAG
AAGATCTTCCTAATGGCTACTTGTTCCGAATAACAAATCTAAAGAGKCAA
GATCTCTGTCTCTCTACTCTAGTAATATATAATTCGCCTTGATTTGCTTC
GAAAAGTTATTTCCTGGTTATTAAAGTCTTGCAATGATTGCATTTCAACT
GTCCGCTGTTGTTGTCTCCACTTTCGAGATATATAAGAAAATATGACGTG
CAGACATCATTATAAACCATGCCCAGAATCCCTTTCATTATAAATACATT
TCTCTCTTACAGATTTTATACACAGAATTCCTTAAAACGCTTCGACAAAA
ACCCAAACTCCTGGGTCAAGTTTTGTCAGTGGGTTGTAAACGTAACATTC
CAGGATTAGAAGAAGTTGAATGTGCGACTTTTTCGGGATTATACGGATCC
TGTTTTATGGCAGAGGATGAAGTCCTTACGCTTGAGCTACTTCATCATTT
GATGTCTGCGCAATTGGCTTCATCACCTAATCCTAGAAAGATTTTAAGGG
CGGGCAAATGTTCGTTTAGTCGGATTTATAAAGTACGTGTTCATTTCCTC
TATTTTTCAAGTTGGGCAGGAAGAAGGGCTTATATAAAATAACTAAGATG
AGTGTATTTGTGTGTGTCTAATATTTGCAGCAAAGAAGAAAAAAAAGTAT
TCATTCATTTGATAAATTTAATATTAAATAGGTCACACAGACACAACTTT
TTCACACCTTTAAAAATGATTCACAATGAGACATTTACTTTAATGAACTA
AAATAATCCCTGCATTATTTCAGGTGGCTCGTCAAAAAGAGTTGCAATTT
TAAAGTTATAAAAACGCCCATGRGTGATATCMCTTCAACTGAAGCTTCCC
CTCTTTTTTTTTTTTTTTTTTTTTTTTTCACAATCATATTAAGTTGTAAT
TCCCGATTCCAATTCTACATCCGATTTTGACATTATTTATAACGGTTCTA
GGACACTCCTGAAAATCTTATTGTCATACGGGCACTGCCCAAAAAAATAA
TACATATATATATAGGAAATGAGGATTCATACTGCAATACTATTTAATTA
TCTATTAGACACTACTCTAATGGCAAACCCATGTTGATATCTATAAGGTC
AGATACAACCTTGGGATAGAGGAGTGTCAATCAGGACTTGACCAGATATA
TAGAAGCTCCAATAGATTTGATATAAACGATTGATTCATTCGCATTGGCA
ATTGAATCTCAATCATTGATTGATTGACTTTTTCTCTTCTTTAAGCATTA
TTTATCTTTCTAATTTATTTGTTTAATTACACAGGGGAACAATTAGAAGG
AAATTTTGTACAAATGAGTTGAAGATAATAATAGAATTTATCTATGAACG
CAGAATCCAAAACGGATCTCAGTTTTTCTCTCCTCAGTCATCTTAATTCT
GAAATTATGGTAATTTGGGACTATTATCGTTTAGAGTCATTTTTACCCGT
AAAACAATCCCCAAATTAAAAGTAGGATTAATAAAACTTTTGTAAAAGTG
ATTTTTATGATTAAAAAGGGTTTTTATTGATTCTGTATCTTGCTCTGAAC
TCAAATATATATTTCCATTTTTACACTGAAAAATATTTTTCATCACTTTG
TATTATCAATAAGTTATGAGAGTGCCGTTTTCATCGTTTTTTACCCTAAA
AATGTAAATATATCGAGTTCAGAACAAGATACAGAATCAATAAAACACTT
TAATTGGGAGTTTCAATAAGAACTCTTCCATAAAAAACTTTTTTACGGAA
GAGTTTTTATTGAAACTCCCAAACTGGTGACCCAGACATGATGGGTAGAA
GCGGCCAAGTTCTAGAAGTCTCTCAAGTGGCAGGGTAAGCTAAAATGATC
CTGTTTTGGCTTGAGAACTCAAAGTCCTGGTTTTACCGACTTTAGGCTCA
ATTTTGCAGTATGCAAGGTCTCAGAAGAGAGTGGAAAATATCACCATTTG
TTGTCGGCTGTGGATGACAAAGTTCTTGATGTTTTGGAAGATGAGGAGGA
GGAGGAGAGTTTGGGTGATACTTCTTACTCCGTAGATTCATAAAACTGAC
TAACTTTATTCTAGTAAAATCTACAAATATAATTATTATTAAATACTAAA
GTCCTTAAGGGGAGAAACTGTCATATTTACCGATGTAGCTATTCGCTACA
TATATTTAATTATTTATTAAAAGAAAGATTCCAATACATTGATTAATTAT
TATTTTTATTTTTTCCAGTCTTTTATTGAGGAAATATTCTCCACCAAATT
ATTTTTAACCACTGCGCTTTTTGAGCCCATTTTATCTTTATTAACTGAGG
ATGAGATTTTCTTAGATATTGATCCGTCGAAGGCTCTTATAAGGTTTGAA
CCTAAGAAATCAATTGTTATTCAATCTAATTTATTTTGAAAACTCATCTA
TTTTTCAGGTTTCCTCCATCTGAAAGAAAAAAGAAATTTGGAATAGAGGG
AACACCCGAGTATCAAAAACGATTGAAGGATCATCGAGAATTCATCATAA
AAAAACTGGAAAATATTACACGTAAATTCATAAATGGAATACAGGATAAC
ATACGCTCATTCCCTCCGTCTCTAAGTCGACTTCTTAGAGCGATGTACAG
CCTTCTCATAAAGTCGTTTGAACTGAAAGAAGTTCATGCCATCTGCTTTG
ACGCTATATTTTATTTATTCATATGCCCTGCAATTGTTGATCCGAATCCT
GTAGGGATTATTGATACTCCTGTCTCCTATATTGCAAGATCAAATTTGAT
GCAGGTTGCTCATATTCTGCAAGTTTTGTGCATGCAAAAATGGGAGGAAA
TTGATCCTAAGCATATGGATCTTTTCTCAAGATTTGATAAGGACTCCATG
TCCTCAATTTTTGAAAATATTTTAGAGCTTGGACTCTCAAATAACGAAGA
GAGCATTAGGAAGCCTTTGACGGAGAGTAATACGTTTGCAGGTATGGGAA
TGAGTGCTGGGACTGCGGCTGCTAGTAATTTTGGATTTAATGATGGCTCA
AAACTTTCACGTTTGGCTGTTCTTATGACAAAGTCACAACTTAATCAACT
TGTGTTATTTCTTAGACACATTAGAGATATAAATAATGAAAACAAGTGCG
ATAACTTATTACCGTCCAGTATGGCCAATGAATTAACTGCTCTTCTTGCT
CCTCTGCCGGAAATTATTCCAGGTGGACTTAATGGTGTACATGAAAATAA
GATGGAAGAGATCCCTGTGAGTAAATCAAGTCAATCGAAAAACTCTTTAT
CTGCACGTTTATCAGCTATGAAAAACGGCTCAAATTCGCATGAGAGTCAC
CCCCTTGAAAACAATTTTCATCATAGATTACATCAAGAAGCTGATAATGT
CTTAGTTATTCCATTGTTTGATCCTAGTACGAGCTATGATCTCCCTGGTC
TTTTATCTGAAGAACAAGTATTATCCCGAAGTCGTCAAAACTCACGGGTT
CGAATGACTCTTCCTAATTCAGATGGATCAGGAAATGAAGTGCTTGAGAA
AAGAACACGGTTTTCTTTGAGCCAGGATGAAGGAAGTATTGGTAATACAT
CGGATAATTTGGAAGCAATTTCTGAGGCTGSTTCTAATCATTCAGCGACG
TCTAGTTTGGAGGRTGGAGATGATCAAGAGGACGAGGATAATCCTATTAT
TGATAACTTATCTGACATGGTTTCTGCAAATGTAAGTGGACGTGGCACAC
CCAATGTAAGTGGACGTGATACTCCATCAAGTCAAGTTGAAGGAGTTCCA
GATGATGATGAAGTAATAAGGTCGGGGCGAAACGAGGGTGAAGAAGACGA
AGCAAGGGGTGCCATAGGTGGTATGGTTGGACTAAGAACTGGACAAGCTT
CTCGGGGGCATCGCCACATACCTCCAAATAAGTCTGGACAAGCTGACTTG
GAAGAAAAGTTTGGTCGTTTCGAAATTAAACCTCAAATAAAGTCACGAGG
AAGTGGAGTAGGTCTCGCTGGAGAGGGTGGTGATGAAACTGTGTCATTAA
TATCTGACACATGGTCTACTGATGTGCTAGCTAGTGATACGGAGACTCTT
GGCGAAATCCTTACGACTAGCTCTGATCGATTTCCCCACAACAATCAGAA
TTTCGCTGATATGGATCCCTTTTCCCGAAATCTCATCCTAGAAGAATTTG
CAACCTCTTCCTCTGCTGGGGCTGCTGCTGCTCTACCACAACGAATGTCA
GGAATTCAACCGTCTATGCCATCAGATTCAACTTCTGTTAATTTATTAGA
TGTTGGAGATACAGCCTCTGAGGCATGGAGTATTGATGTCCTGGATGGAG
ATAGGGAGAGCCTTTGTTTGGGGGAATTAGATATTGAATATATCTCAAGC
ACTGTATCAGCTGAGGATAATCAATACATGGAAGGTATTTCTCAGAGTGG
ACGAAACACAGATATACTATTAGTTGATGATAATTCTCCTGTTGCTAATA
GAGCAGAGGCAAGAGGTAATAATTTATCACGCCCTTCTAGAGATGCAGCC
ATTGAACAATGGGCTTGCTCCTCTGGGGTCGGAAATATTGAGCATCAAGA
TGGAGCTATAAGACGTGGAAGTGATAGTTCCAGCTCAGCGGCAGKTGCTG
CACAGKCCCCCACGTCCTCAAAGTTACCTCTTGGGATGGAGAAAGCTCCA
CTTGAAGACCCAAATCAAGCAACACTGAGTTCCCACCTAAGTGCAGCTTC
TATTGCATCCTCAAGCGGAAGCTCAGGTGATGCTGCTGATTCCAATATTA
ATGCAAGCTCAAGAAAAAATGTTTTAGTTCCTTCATCCAGCACTGGAGCG
ATTCCCAAATGTGCTAATCCTGATAAAAAGTCTGGAAGATCTGAGAAATT
TTCATTCAAAAATTGGAAACTGCCCAAAATAAGTAGAAGCAGAAGTTCCG
TTGAGAGTCTTCGCTCAAGTTCAGATAAATGTTTCAGCTCACATAGCAAT
AGTTTAGACAATCCAAGTCATTCAGTGGATGGCCCTCCACTGGGATCTTT
GCAACGTTCACATGAATCCTCTGACGATATTTTAAATAAATACAGAAACA
AAAAACCCGTGGCAGTTGGTAATTTAATTGACATAACCGATTCTCTAGCT
GAAGAGGAAGTTGACCCTCGACTCATAATTGATCACAATAATTTGGAGAA
TTGCTATGCATTCCAAGATGCGAAGCGTAAATTGCGCCTTACACTTTCTT
CCGTTGATTTGTCAATGATGCCTGATATATGTCATGCCTCTTCAGTTGAA
CCTGAGGTTATATGGCTCCTCAAGGTTCAGTTATCAGAAGCCCTTAACCT
ACAGGACCGTAACTTCATCGCTCAACTTCATGAAACCCTCAGGTGCCTCA
GCTTATTCAAAAAAGACGGTGTATCACGGATACTGAATTCCCTCAAAGAA
GAATATAAGCGCCGTGCTCCTTACATGGCGTATCTTGTTCGCTGTCGTCA
AGGTCTTCTCTGTACCCTATCTCGTCAAGAGCGTCTTTTATCTCGAATGA
ACATCGATCGAGACGTCTGTGCCTCCTACCTTGTCTATGTCGTTGTTCGC
ATCTTTCTTGAAAATCGAGAGAAAAGGCTGCATCACTTTGTGCAGGAATT
TAAGGAACTTACAGTTCCTGATGAGAAAACAGCCCTCATGAATTCATTCC
TTGCACTCATGAATAAAGAACTTGAACATGACCCAATTTGGTCATCTGTC
TGCTCCACGGAACAATTGAAACTAAGTAACATAGCAATAGAGAGATCCAT
AACCTCACACATATATTTCCATGCCATGTATCCTAATGGAGAGGCGGATA
TTAATCGGGATGAAGTTCTTTCTGAGCATATCCGAAAACTTGGAGAAATC
ATTACTCCATCTCATAAATGTCTAAGAATCCCACGTCAATATCATTATGA
ACAACCCTGGCCCTCGGCACAGGCTGAAATCCGTCGTCTCGCTGCCTTCA
AAACACCGGCTGRTAAAGTTTCTTGTATTAAAAGGGCCTCTCAGACCATA
ATGAATCTACTAAGTCTTGGGAGCTCTARGGGTGTMCCTGCCGCAGATGA
TTTCATCCCCGTATTGGTCTTTATCCTTATTAAAGCAAATCCTCCAAGTC
TTCTTTCAACCGTACAGTACGTTGAAAATTTCTACGGGGAGAGGCTCTGT
GGTGAGGATGAATACTGGTGGGKACAGACGGKGKCGGCAATTGAATTCAT
TAAGACTATGGATTATTAG
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