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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s838 | supercontig | LSalAtl2s838:159097..165930 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011891 >EMLSAP00000011891 ID=EMLSAP00000011891|Name=EMLSAP00000011891|organism=Lepeophtheirus salmonis|type=polypeptide|length=546bp
MTRNWPFSESCQMSLVIVAMRIIVIGSERMLSDSWMISWXEEEGADXIVP
EEFRERMWRAFETPHTSTPALVFYYVTGFFIAVSVMANVVETVPCGEVPG
RNQIQPCGEKYKIMFFCLDTACVMIFTAEYFLRLYAAPDRFKFMRSVMSV
IDFVAIMPYYIGLGLSDDNEVSGAFVTLRVFRVFRIFKFSRHSQGLRILG
YTLQSCASELGFLVFSLAMAIIIFATIMFYCEKSVDGSTFTSIPAAFWYT
IVTMTTLGYGDMVPSTNLGKLIGGICSLSGVLVIALPXPVIVSNFSRIYH
QNQRADKRKAQKKARLARIQIAKATSGAAFVSKKKAAEARMAARAAGLEV
NENDKEDIFEMQHHHLLRCLEKTTNREFVEMDVPFNGGLRGIRATMSQGP
SSLPSSPSIVHGSGWKNSLLGSCCGKCSSSGCEDSCSKPSITHESKYSVS
GNKKHDNLHNDTELNDVQIRGMYRENLTITGGFGREPSLNNNALGVVLGS
PHAENSPVVISAVVSAPNPSSENNNSPSSPEVQPSSILPSVTXSNL back to topmRNA from alignment at LSalAtl2s838:159097..165930+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011891-707738 ID=EMLSAT00000011891-707738|Name=EMLSAT00000011891|organism=Lepeophtheirus salmonis|type=mRNA|length=6834bp|location=Sequence derived from alignment at LSalAtl2s838:159097..165930+ (Lepeophtheirus salmonis)
TTTGTCTTGAGCGTGTTGTTTCCCATTCGTATTCGTTGATTTCTTCAAGA
TGGAAAAGTGTAGAGTGAAATTTAAAAAAAATAATTGAGGTGACATGATT
TGAATAAAATCCTCAATTTCCTTCTTTCCGACCAAAGGTTGTAGAACAAC
TCAGAGTTACATATTTGATTATACTTCCGTGTGGTNTTCCTTATTATGAC
TATGAGTTAACCGTAAATTGGATATAAGTAGATCATCATTATCATTTTAG
CAGATACATAATTTTGAGGTGCTAAAATTGAATTAAAGTCGACGTTAATA
TTAAGACATCGCAAGTAATTTGTAAGGGAAAAAAGAAAAAAATTACTGAC
AGTTGGAAAAAAAGACCTTCAAGACAAGTTCTCAAAGTTCACAAACGGTT
GAAATAAATCCATCTTCCTTGGACTTGATCTTCCCTTCCTTAAAATAGCT
CCAAATATGGCCTCGGTGGCCGCCTGGCTTCCTTTCGCCCGAGCAGCAGC
GATAGGATGGGTTCCCATTGCCACCCATCCCCTGCCTCCTCCTCCAGCGA
TGCATGGAAAGCAGCGATGTGAGGATGAGAAACTCATTGTGAACATCTCG
GGTCGACGCTTCGAAACGTGGCAAAACACACTTGAAAAGTATCCAGACAC
TCTCCTTGGCTCCAATGAACGTGACTTTTTTTACGAAGAGGAAACGGGAG
AGTACTTTTTTGAKCGAGATCCGGATATATTTCGCCATATCCTTAATTAC
TATCGAACAGGGAAGCTCCATTATCCACGGAACGAGTGTTTGACTCAGTA
TGACGAGGAACTGGCCTTTTTCGGAATCATGCCAGATGTCATTGGTGATT
GTTGCTATGAGGATTATCGTGATCGGAAGCGAGAGAATGCTGAGCGACTC
ATGGATGATAAGTTGGANTGAAGAAGAGGGAGCCGATGSGATTGTGCCAG
AGGAGTTTCGAGAACGAATGTGGCGAGCCTTTGAAACGCCTCACACCTCC
ACTCCAGCGCTTGTCTTTTATTATGTCACTGGATTTTTCATTGCAGTATC
TGTGATGGCTAATGTGGTGGAAACAGTGCCATGCGGGGAAGTTCCTGGAC
GGAATCAAATTCAGCCCTGTGGGGAAAAATACAAAATAATGTTTTTTTGT
TTGGACACAGCATGTGTCATGATTTTTACTGCAGAGTACTTTCTACGATT
ATACGCCGCTCCAGATCGATTTAAATTCATGCGCTCCGTCATGAGTGTCA
TAGACTTTGTGGCCATTATGCCCTACTACATTGGTCTTGGCTTAAGTGAT
GATAATGAAGTCTCTGGAGCTTTTGTTACGCTTCGCGTCTTTCGTGTTTT
TAGAATCTTTAAATTCTCCCGTCATTCTCAAGGTTTGCGGATCCTAGGAT
ATACTCTCCAGTCCTGTGCCTCAGAGCTGGGCTTTCTCGTCTTCTCTCTA
GCAATGGCCATCATTATCTTTGCAACCATTATGTTCTATTGTGAAAAGTC
TGTAGATGGGTCCACTTTTACATCCATTCCAGCTGCTTTTTGGTACACCA
TTGTGACCATGACGACACTCGGGTAAGTTTCTGTTCATCAGGGGGGGGGG
GGGGGTTAATCTGAATACTAGCAGTGTATATTTTACTATTTATGGAGCGA
TTGAGATGATTTTCTTTCCTTGCTTCCAGTCTTTTTTTTTTTTGTTTTTC
TTTCTTTTCTCTCTTGAGCGATCAAAAGAAATTATTTTAGTTATTAATAT
ATATAACATTTATTTTCTTTTTATGATTCTCATTTATGCATATGATTAAT
TTTCTAAGAATAGAGAACCAGAGAGAGAGAAAGGGAAATTCAGGCAGACA
AAACCAAAAATATGTACATTGGACATACACACAATTCTTAATGTCTGTAT
TTCGTGATTCTTTCAGCTATGGTGACATGGTACCAAGTACGAATCTGGGG
AAGTTAATTGGAGGGATTTGCTCCCTTTCTGGAGTACTTGTCATTGCTCT
TCCCGYCCCTGTCATTGTCTCCAACTTCTCAAGAATCTATCATCAAAATC
AAAGAGCAGACAAACGAAAAGCCCAAAAGGTAGAAAAGGATAATTTATTT
TTCCTCCATAGGAAGTTTTTCATTGAGTCTTTTCTTTTTTCCCCTCTGTT
AGAAAGCCCGACTCGCAAGGATTCAAATAGCCAAAGCAACCTCTGGTGCA
GCCTTTGTCTCAAAGAAAAAGGCGGCTGAAGCACGAATGGCAGCCCGTGC
TGCGGGKCTGGAAGTTAATGAGAACGACAAAGAGGACATTTTTGAAATGC
AGCACCATCATTTACTCCGCTGCTTGGAGAAAACCACTGTGAGTTCATTT
TTTCATGCCTTTGCAGTACTGTTTTCCAGATTTTGTCGTTTGATTTGAAA
TTACTTCACTGCTTTGAAGATGAATCTTTGATGAGCTCTTCAATAGTTTT
ATTGAGAGGAGTAGTGGAAAGAAGGAAAACTACAAAGAAAAGGAGAAAAA
CGAAAGCCCCAATTAAATAAAAATGATAATTCAATTGCCAATTTTTTTTT
TCTTTTGTAAACGAATACTAATCCTTCCTTACTTTTTTGTATGATCCAAT
TTAGAATCGTGAATTCGTAGAAATGGATGTGCCCTTTAATGGAGGGCTAA
GAGGAATTCGAGCTACAATGTCACAAGGTCCTTCTTCCCTTCCATCAAGT
CCATCCATTGTCCATGGATCTGGATGGAAAAACTCACTCTTGGGCTCTTG
TTGTGGAAAATGTAGTTCTTCAGGCTGTGAGGATGTAAGTGATTATTGTC
TCTTTTTTTTTACTAATGCATTTATCAAGGTCTCTTGATTCAAATTCATG
ATGACAGCCTTACAGTTAATTATAATGTATGCATGTATTTTCCTTATACT
CATGCGTACTAGGCCTTATACCTACTAGGGAAATGAATGGTATAACCCCA
TACATATACAACATATTCTATGAAGAAAAAAAAAGTAATAGGGCACAAGG
AAATCCCTAGGATTTCACTTGATTTAAATTGTTGTTTCATATTATTTTTT
AAATATCACACAACCTAGAAAAGAATCAAAAAATAAATAAATACAAAAAC
GATTCATTCAGTTAATTACCTACATGCTTAATGTCATTTCTTTTTTTTTT
AAACTAAAACAATCTTCTCATTATATACCTATATACATAAAATCTACTTA
TTTTCGAATTAACTCTGCAATGCGCAGTTCTCAAAGAAAGAATAAATGTA
TTTTTGAAGGGAGAGGTCAAGGTGATCAATAGTTGTTGGTAATACTCTCA
ATATGTGTTGTGTACTTCCTTAATTAGGACTGAAGACTGCAGTCCCGTAC
AGTTCAGTCCTAAAACTTATAAAGTTCGGTCTGTGATGAGATAAATCAAT
TTTATTGCTTCTTTTTTAATTAGATCTATTACTGACACTTTCACACAGTC
TTATTAGCTGGTCCCATGGATTGTTAGGGCTAGAATGGACCGAATAAATA
AAGAATGACGTAACACGACTCTCAATATTTAAAATTACTACCATATGATT
GAGTCCAGCTGGGGGATGGAGAGAGATAGATATTTATTGCATATAATATA
TATTTATTTACTACAAAATTTGTAGCAAATTTAATCATGATATTCAAAGT
TTATTTGCTAAAATAATCAGGCATAGGGGATAATGTATTCTCATGAGCTT
TTGTACACAGGATTATCTCCCTCTGTTAATATATATTTCCCCCATCTCTT
TATCACTACGGAAACAGCTTTCACCTCTTTCCTACTTTTTTTTTTTGTTA
AACAAAGTCTAATAAATCTTTTTGTATTTATTTGACGGTTTCGGATAACA
TAACTTTTTATTACCATACATCATACATTATGTTAGATACATAAATAATT
TTTAATAAAAGATGGGAAGAAAAGAAGCCGGTCATCTCATTTTCCTTAAA
GTAATACAAGTGATCTTTACTTAAAAAAAGAATACGCGCACGCCCACGAG
TCTCTTCTTTTCTTTTACTCCATATTTATCTATCAATAACAATATAATAA
TAAGTAATCAAATATGTTTTCCTCCAGTCAACTCTGGGGACATTAATTAA
ATATGAAGATTAATGATTAGTGCAATAATAATACTATAAGTATTATTAAT
ATTTATCATAATGAAGACACAAGGGAATAAATAATGTGACTACCATGTAC
TAATAAATAAAGAAGAAATGGGCTCAAGTATTTAAGGGACGGGAACGGGA
TTTGTAGATTTGTACATTCAAAGGAGTGATGGTATGTTGAAGGAAAAGCA
GAGGAGAGGAAATTAGTCCTCTTGAGATTTACTACAAACAGCACGTAAAC
AGGAATGACTACGTTAGCAATCCTCAATTCTACTCTGAGTCAAACTAGGT
CTTATATTGACTACTTTTTAGCAAATCCTTGGTTTTACTCTCCGTCTTTC
ATGAACACACTTATCAGTGATTACCCAGACGGTTTCTTATTAAGAATTAT
AGAATAATACTAACAGCTGTGGATTGAATAAAACACTGTTCAGATTGTCA
ACTACAAAAAAAAAACACGTGCATAAATGCTTAGAATTTACTCCTATAAT
AAATATAAGTCATTGTTAGACTAAGAGTAGAATTGAGGATTGTCAACAGA
GTAACTCCTGTCTATGTCCTTGTTAGATAAGGACTGGGATTTGTGTATCG
TATCTTACTCGTTCTCTTATACCGTCAGGCCCATTGATATCAGAATACTT
TTTAATTCAATAATTAATTAAGGATGAATAATTGAAAATCATTCATATTT
CGATATGTTAAAGCATACACAATTAGTAACAAAACAAACCAAATCTGAGC
TATCTAGCTGAGGTACAAGTCAAGAAAATGACATTTGAACGTGATCGACG
AATTTCCATTCGCGCACTCTAAGCATTTGGGCGTCTGTAGGATATTTGTC
AACGCTGTCAGCAAGTCCAAACGTTGGGAGGAAGAAAATCTCTCTCAAAA
ATGGCAAACTGGATCTGGAGGAGTTAAAAAAACAATTCAGGCTAATCCTC
TAATGTCCATGAGTGCCCATGCTAGAGATCTCTGGGATTTACCCCAGGCT
GTACAGAGAGCTATTACAAAAGTGGGTGGAAAGAGCCCCGTGATGGCGGA
GAGGCAGCTTTTGACACCAGACTTTTAAAAAAAACCATCTCATCCGGTGC
GAGACTCTTTGGAATGAGTCTTTTAATTATTTTTGACACTTTCGCCCCCC
TACAGCCCTAATGCTAAGCCCTTCGACTACACCTTTTTGGTGGATGTCGA
GGGGGCGACTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATC
TAAACACTGAGGCCCCCAAAGGCACAGTCACCCAGTACTGGGAAAACATG
ACAGAGGTTTTAGACCTTCCACGGCAGCTTGGAAGCCGGCATTGGCACTA
AGGGGCGGCTATATTAATAATTAAGATAGCTCAGACGCACATCTATTTAT
TTTATTAATTTCGCTGAAATTATAATGTTGATTAATAAAGTACATGTTGT
GGAATTTTAAAATTCAAAGTGTTCAGATTTTAAAGGACCACTCGGTATAG
CTAATTCTAGCTGGTCTAATAAAACAACATGATGTTGGTTGTTTTAACAA
ACCTTCATGGCATATTTTTTACAACTAGAGTAATAAAGARAAGAAGACAC
TATCTATTTTTMCCGCCTGTATAGAACCATTATTTATACATTTTAAATTG
AATTCTTCATCCACACAAAAACAAAAAAACAATATCTTTAAATATGTATT
TTGTTTTAAATTAGAGGTTTTTTCATTATCCCTTGGTTCACATACCAACA
AAACAATGCAATACACAACGATTTTTATCCATTTCAGAGCTGTTCAAAGC
CCTCCATTACGCACGAGTCCAAATACAGCGTTTCAGGAAACAAAAAACAC
GATAATCTTCACAACGACACTGAGCTAAATGACGTACAAATACGGGGAAT
GTATAGAGAAAACCTGACCATAACCGGAGGGTTTGGAAGAGAGCCATCCC
TAAACAACAATGCCTTAGGCGTCGTTCTGGGATCTCCGCACGCAGAAAAC
TCTCCTGTTGTCATCTCTGCTGTTGTATCAGCTCCAAATCCCAGCTCAGA
GAATAACAATAGCCCTTCATCCCCTGAAGTACAACCCAGCTCTATTTTAC
CAAGTGTGACAKTATCCAATCTATGAAGAGGTGGGGAGGGGTGGCCCGGG
CTGTAAATTGAACTATTAATCATGAATTCTACGTCACTTCTCGACCAATT
AATAAAGAAAGTAAGACAAATTATAGTCATCTCATATCTTTTCTTCCTTA
GTTTCTTACGTTCTTTATTTTTGTTCTTCTAGTGAGATTTTTTTTTTTAA
AATGGAATTTAAATCCTTCATTTAACTCTCCTTACATCTATCGTAAACTT
TTATTTTATTTTTGTTGAACTTTAGTCAATAAATATGACTTGGAGAATCT
TTTTATGATTTAATTTCCCCATTATTACCTATTAGTAAAATTATGTATCT
CTTGAAAGGTGTTGACCCCGAGATCGATACATGAATTTCTGGACGGACAC
AATGACAAAATACAAAATAATATTTAACAATATATATATATTTATTTATT
TAATACATTTAACTTTGCATTTAATTCAATGTTA back to top
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