EMLSAT00000011892, EMLSAT00000011892-707739 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011892
Unique NameEMLSAT00000011892-707739
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s838supercontigLSalAtl2s838:224621..231489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011892 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011892EMLSAG00000011892-694658Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053189EMLSAE00000053189-762117Lepeophtheirus salmonisexon
EMLSAE00000053190EMLSAE00000053190-762118Lepeophtheirus salmonisexon
EMLSAE00000053191EMLSAE00000053191-762119Lepeophtheirus salmonisexon
EMLSAE00000053192EMLSAE00000053192-762120Lepeophtheirus salmonisexon
EMLSAE00000053193EMLSAE00000053193-762121Lepeophtheirus salmonisexon
EMLSAE00000053194EMLSAE00000053194-762122Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774896auto774896Lepeophtheirus salmonispolypeptide
EMLSAP00000011892EMLSAP00000011892Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011892

>EMLSAP00000011892 ID=EMLSAP00000011892|Name=EMLSAP00000011892|organism=Lepeophtheirus salmonis|type=polypeptide|length=667bp
MIKEWTLIGPLTIPLLIVIAVISTLILRRRKSSIPIDISPVKKAKEETQT
SCCGSNDCCGNDSSDSSIKKIKVIYGSEGVSKELALSIKNVASDLSVEIL
SSKDYYPGDEILTDVKETGLLVVVIISTYTEGLPPPDAKYFYSWFEEEAK
DFRVQHSILKGLKYCVYGLGHSGYGQEXYNVTSRNLDKFFRQLSAETYLP
LSLSDENDGTVQEEFNTWSKALMKKIKGKQNGLISEAGKETIQDSDTDEE
YSDEEEEENEEDDGLVDMEDMGVVMKKAKEFKNSAPKDMVTPTLRKSLTK
QGYKIIGTHSGVKICRWTKAMLRGRGGCYKHTFYGIESHRCMETTPSLAC
ANKCVFCWRHHSNPVGTEWKWSMDPPDMILDGALENHYKMIKQMKGVPGV
LPEKLAEGMDVQHCALSLVGEPIMYPEINQFVRLLHSKSISSFLVTNAQF
PDAIASMDPCTQLYVSIDASTKESLKKIDRPLFKDFWERFIQSLKELSHK
GQRTVYRLTLVKGFNVEELHDYAKLVALGRPDFIEIKGVTYCGTSKASTL
TMENVPWHEEVVNFSQTFADMLEDYEISCEHEHSNCILVSHKKFHIDGEW
KTWIDYKRFHELVSKFDVNDPSTRFTASDYMVKTPDWAVYGAVERGFNPS
QTRVHRKGKKGVKSEAS
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mRNA from alignment at LSalAtl2s838:224621..231489+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011892-707739 ID=EMLSAT00000011892-707739|Name=EMLSAT00000011892|organism=Lepeophtheirus salmonis|type=mRNA|length=6869bp|location=Sequence derived from alignment at LSalAtl2s838:224621..231489+ (Lepeophtheirus salmonis)
ATCAAGGACCCTAGATATTCACTGAACTCAAGGGATTATACTTTTTTAGG TATTATACTATTCAATTTGATATTATCTATTTAGCAAAGGATGTTCACCA CTCAGGAATTAAATAATAATAACAAATTAATGGGACAGCTAATAAACACC GGATTTACATCATTAGTCATTACATATACATACATATTTTGTTCAATCAA TGCTGTTGTGAGGGAATCTGATTTGAAATATGGAATGGGTCATCAAATTG TACGAAATCTTGCCCTATTATATATATATTTCACCTGAGAATACACAGTA GTACAACATGTTCTACATGAAAAAATGAATACTTAAAGGCATTAAAGAAA TATATACCTATACATATATATTGAAGTATGTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNAGGATGAAAATCCAGTGTATATTTTA TCTGGCCCGTTTTTTGGAATTAGTAATCGGAAGAAGGAACTTTTTTTTCC TTAGCAGCTGTCATTATTATTTAATTCATGAGTAGTGAACATCCATTAAT AAATATATTCAAAACCCTGATTTAACATTCGTTTGTTTTCATAAAAGAGG GAGCATAACCATGAGAATTTGTTACAGAGATATAATTGTAAGCCCCTGTT GGACCAAGATTAGAATTGGGGATCGAAATTAGATTAATTCAAGCAAATGT CCTTTTTTTATATCCTTCTTTTCTTATCAAAACTGGTTGTAGCATTATCT TTCTCTCCTCCTACCATTCTTCAAATTTTCAGGGTTACCATGTTGATTTT TGGTTTCCACTTTACACTGGATTTTCATCATTGTATATCAGAGGTGTCCG CAGGAAGTGGGCTGGAGGTAGTATTGTTTCAGTCTTTATTTATTCGGTCC TTTCCAGTATTAGGACGGGTTGTTAAGACTGTTGGTCCTTCATATTCTCA ATACCACTAGAACTGATTTTTCAAAAAAGTTGAGTAACGTCATCAAGGAC CAAACTTTATAAGTTTTCAAACTGATCTGGACCAGAACGAGACTGAACTA GAACAACACTAGCTGGAGGAGCTTGAGCCCCTCCCCCATCCTGAATCAAG GATAAAACTCAAAAGTTATTGCTTTGTGGAGAAAATTTAAAATAGCGAAA CGGATAAAAAAACATTTTTTTTAAATAGGATATTTGTTAAAAATTATTGT CCAAAAAATTGATCTAAAGTTTTTAAAGTCCCACACCCAAATAAAATCCT GCAGACACCCCTGTCTTCATAATTACATACAGCCCCGTCTCAACGGGGAT ATGCGAATCGGAAAAATGGGATATCAGTGGGAACATTTGAGAATTTGTAT TGTTTTGTGTAAATGTTTATTGTCAAAAATATAGAATTTTTAATTTATAA AGAAAGGTCCTTTTCAAAAAACGGTTCTTTTATAAATAAAAAGTGATATC AGAATTTCATCACAATTTTTAAAAGTTTTTAAGCTCCTCAAAGAAAGAAA CAAAGGACGGCTCCGGCTACAGAATATAGCTTATTATATCAGGAATTTTA AAGACATTTATTTATTAAGCTTCAATCGGTGAATTCACACAAAGGGTGAC TTATTGATATTAATAAAAAATTAGAATATCTCTTGATATTTTCATTTCAT GATAATTATATTACTCTACCCTAGTTTCAAGGACATTAAAATGCTGTTTT TAAAGTTGACTGACTACATTCTTATTGCATAAAGGGAATGCTAACTTAGC CCATTATATTAAACGAAAAGATTTGCATTCTTCATCAGTCTTTTTTGGAA TAGATTTCTGAATTAATAAAATAGAAAACAACATTATACAGTATTATTGC AACGAAACTATATAATTAATTATTTCATATCGTTATAATTGATATAATAT ATTCAAGCAGCATTCAATTGAAAAGAAAAAAAAATCAAACCATGACATAA CTTAAAATCTTAAATAAATGACGACTAATTTATCATTTTAGTACATTTTT TTTATATTATGCTTTAAATGTATTAAGGTATTTTTGATATCTGACTGTTT GCAATGATCAGGGCATTAATCTTGCATTTTTAATGTCAAGTCATATGTAT ATTTTATCCAGAACTTAATGCATTTTAACCCTTTTGCATCGGGGGGGCAC TAGTGTTCTATATTTTGATTCATTCGTCATTCTATTATTTTTCATGATAT TTAAGATATTTTAGAAATATTATGAAGAATAATAGTAGATCAATAAAATT TAACTAAACATTTTATCATAGAACTTTATGTTCGTGCTTTATAAGTCTTC AAACTATGTCATTTTTTTGGAATTCGATAACATAAAATGCMTGTCATGTA TGGAMTGTTTAAATTTTTTATGGTTTTTTWAATATTTGTCTAGTGTAAGG AAAAATTGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNAAATTTCCCTTTGTTTCGATGAAAAATGAAAAAGTTTTGGGAGTTT AAAATCGTTGGGGCACTGATGTCCCTCTGGGTTTCAAAAGTATWTTTATC TCTTTTGTATAAGATTTTAAAAATTTATAGCATTTTAGATTAAGTAGAAA GTGCTGATACAGAAGACATTAACAATTTATTAAATAACTATGGTATAAAT AGGTTATTATAGGTGATGAAGCGGTTACCACAGAAACGAATGCATAAGTT GTTTCATTGACTCCTGAAGACAACATTCATGTCGTTATAAATAATACTTC GAAATTTTCACTATGATGATCATCTCAAAGATGATAAAGTGACAGAAAAT TTATGTTAAGACCACTGATAATCTATCTGAACGAAAGGTTCACAAAATTA TTGTCCTTCAATTGTAAAGCTCTACAATAAAGGGCTGGAAGCGAGTTGAT CACGTGGATCAAAGAAGCTATATCTTCTAGATATAGCATGTGTAAACGAT ATATCCATTATCACTTTATATATCCCAATAAATTATTGCTCCTTGACCAG AAAGGAGCAATTGCCAAGAGTCTGATTAAATATTATGAAGGGCCTCAAAA GGCAATCTAATCGTCTAGACCAACGAAAATCAAAAGATCAATCTCTTACA ATGGACATCCATCGTGGACATTTACCAGAGTTTGAACCAAAAATAAAAAG ATGTGCATATTGTGCAAGCATAAATATAGAAAATCGAACATTGGTCATTT GTATTGCTTGTAATCTTGTTTCCAGCTAAGTTAGAGATAGGAATTATCTC TAAATGTGTCACATGTAAAGCATTAATTAAATTAATATTTTTCAATTATA AAAGGTAGAATTATTAATTGTTTGAATTAGAAATAAAAAGTATTTAATGA ATATAAAGAATTCATCTCCATACATGCTCTATACCGTAACTTTAGTATTT TGTTTATACATAATAAAAAATTACGTTCATMCCCAGTGAGTGACACGAKT AGCCAATCAAATTTTGACGAAGCTATTGAAGTTAATAAAAAAATTATTTC TAATATGATGAAAAAGATCAAGAATTGACTATAACTATCTTAGGTTTTCT TTTCAATTCCTTGTGGATCTGAAAGGGTTGAAATAATGAAAATGTTCATA ATATCTCGATATCATTAACATTTACAAGTTATTTAAATGATTAGAATAAC CAAAAAAATACACGCAAGCTATTTTTTTTTAAATCTCTCAACCTTTCTTT CTCGTATTTCAGCAATCAATCGTAAGCGCGTTCATCAACAAACAACGTGG TAGGATGATAAAGGAATGGACTTTAATAGGACCCTTGACGATTCCTTTAT TAATCGTCATTGCCGTCATATCAACACTTATACTACGAAGACGTAAATCC TCCATCCCTATCGACATATCTCCAGTGAAGAAGGCCAAAGAAGAGACTCA AACGAGTTGTTGCGGTTCGAACGATTGTTGGTAATATATTTCTTTATTTT GACGTCAGAGTATCATGTGTTTTTAGAGTTTTAAATGGACTTTTAATTAA TTATGTATAATTTTTGCATCCAATGTGCAAATATCAAACTTTGATCGATG TCAATGGATTAAATTTTATGAGGAAGATTTTAATAGTTGATCTCTGCAAT TGTCTACAAAATTATATTTTTGTGACATGATGTGCCCGATGACGTCATTT TGACACGTGATATTAGTTCTAATTTAAAATTGCATCTGTTTTTAGCGGAA ATGACTCGTCCGACTCTTCCATCAAAAAAATCAAAGTGATTTATGGCTCA GAAGGTGTATCAAAAGAACTAGCTCTTTCCATTAAGAATGTTGCTTCCGA CTTATCCGTTGAAATACTGAGCAGCAAAGACTATTATCCTGGAGATGAAA TCCTGACAGATGTGAAGGAAACTGGACTTTTAGTTGTGGTGATTATATCC ACTTACACTGAAGGATTACCTCCACCCGATGCCAAGTATTTTTATTCATG GTTTGAGGAAGAGGCAAAGGACTTTAGGTTTGTACATTTACTCTATGGAT GAATGAGAAAGTGCCCTTAACTTTTTCTTGATAACTAGAGTTCAACACAG CATCTTAAAAGGGCTAAAGTATTGTGTCTATGGACTCGGACATTCTGGCT ATGGTCAAGAGKATTATAATGTTACGAGTAGGAATTTGGACAAATTTTTC CGACAATTGAGTGCTGAAACTTACTTGCCTCTCTCTCTAAGTGATGAAAA TGATGGAACTGTACAAGAAGAATTTAACACATGGTCAAAAGCCTTAATGA AAAAAATTAAGGGGAAGCAAAATGGATTGATAAGTGAGGCGGGGAAAGAG ACCATTCAAGATTCTGACACTGATGAAGAATACAGTGATGAGGAGGAAGA AGAGAACGAGGAGGATGATGGACTGGTTGATATGGAAGATATGGGTGTCG TAATGAAAAAAGCGAAAGAGTTCAAAAATTCAGCACCGAAAGATATGGTG ACTCCAACCTTAAGGAAATCCCTCACAAAACAAGGCTATAAAATAATTGG AACACATTCGGGTGTTAAGATCTGTCGTTGGACAAAAGCCATGCTCCGTG GAAGAGGCGGCTGTTATAAACATACGTTTTATGGGATTGAATCCCATCGA TGCATGGAAACGACTCCTAGTTTGGCTTGTGCAAATAAATGTGTTTTCTG TTGGAGACATCATTCAAATCCTGTGGGTACGGAGTGGAAGTGGTCAATGG ATCCTCCTGACATGATACTTGATGGTGCGTTAGAAAATCATTACAAAATG ATCAAACAAATGAAAGGCGTTCCTGGAGTTTTGCCTGAAAAACTTGCTGA GGGTATGGATGTACAACATTGTGCCCTGTCACTTGTTGGAGAGCCCATCA TGTATCCTGAAATTAATCAGTATGAGTCAATTACTTTTTTAATCAAGTAT TCTATTAATAAATATTAACATGTATTAAATGTACTTTACAGATTCGTCCG ACTTCTTCATTCCAAATCAATTTCAAGCTTTTTAGTTACGAATGCCCAAT TTCCAGACGCTATTGCTAGTATGGACCCGTGTACCCAGTTGTATGTTTCT ATTGATGCTTCTACAAAGGAATCTCTAAAGAAAATTGATAGACCTTTGTT TAAGGACTTTTGGGAGAGATTCATTCAGAGTCTGAAGGAATTATCTCACA AGGGTCAAAGAACTGTTTATCGCCTGACCCTGGTGAAGGGATTTAATGTG GAGGAACTCCATGATTATGCTAAACTTGTAGCTTTAGGCAGACCCGATTT CATTGAAATCAAGGGGGTAACCTACTGTGGAACATCCAAAGGTGAGTTTT GGTAACAACAAACCATTTTATATGGAAATATATATATTTTCATTTTGGGA TCAATGGCATTTTTATTAGCATGAAATCTTTTACTTTATAAGTCAAGGTT TTGTTTGTAATTAAGCCAAGAAGAAAAAAAGTATTTATTTAACCATAAAT ATTATGATATAAATATCTTGGTGGTATTAATATTTGCGTAAGATAATCAC TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCAAGATTAAATATTCATTTATCATGTTTTATTT GCCAATGCTTGCAATTACAGAATTAAGGAAAGAAGTAAAACTTTCCCATT TCAACCTGCTTTAAACATATTATATAATGTACAAGTATTTTAACATAATA TTATACAATATATTGTATATGAACTTATTTCCAGCCTCTACACTAACAAT GGAGAATGTACCTTGGCATGAGGAAGTTGTCAACTTTTCTCAAACATTTG CGGATATGTTAGAAGATTATGAAATATCCTGTGAGCATGAACACTCTAAT TGTATACTTGTCTCGCATAAGAAATTTCACATCGACGGAGAATGGAAAAC TTGGATTGATTATAAAAGATTTCATGAACTCGTATCTAAATTTGATGTGA ATGATCCATCAACGCGTTTCACGGCCTCTGACTATATGGTAAAAACCCCT GATTGGGCTGTATATGGCGCAGTAGAAAGGGGATTTAATCCCAGCCAAAC GAGGGTGCATCGGAAGGGTAAAAAGGGTGTTAAATCTGAAGCATCTTAAT TATGAATTGGACTTTGTGCTATGTTTCTAATAAATATATACCTACATACG TTTTTAATATTATGTATGTCAGTAAAACCGTATGCACATTGTCGTATGAT TACTCATTTATTTCCATGACCGCATACTAACCTCAAATCATAATATCTCC TATACTTACTCAATGCTCAACCCCTTTTACTTTTTCTTCTTCTTCATTTG TGTAATTTTAAGACAGTTC
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