|
Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s838 | supercontig | LSalAtl2s838:224621..231489 + |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011892 >EMLSAP00000011892 ID=EMLSAP00000011892|Name=EMLSAP00000011892|organism=Lepeophtheirus salmonis|type=polypeptide|length=667bp
MIKEWTLIGPLTIPLLIVIAVISTLILRRRKSSIPIDISPVKKAKEETQT SCCGSNDCCGNDSSDSSIKKIKVIYGSEGVSKELALSIKNVASDLSVEIL SSKDYYPGDEILTDVKETGLLVVVIISTYTEGLPPPDAKYFYSWFEEEAK DFRVQHSILKGLKYCVYGLGHSGYGQEXYNVTSRNLDKFFRQLSAETYLP LSLSDENDGTVQEEFNTWSKALMKKIKGKQNGLISEAGKETIQDSDTDEE YSDEEEEENEEDDGLVDMEDMGVVMKKAKEFKNSAPKDMVTPTLRKSLTK QGYKIIGTHSGVKICRWTKAMLRGRGGCYKHTFYGIESHRCMETTPSLAC ANKCVFCWRHHSNPVGTEWKWSMDPPDMILDGALENHYKMIKQMKGVPGV LPEKLAEGMDVQHCALSLVGEPIMYPEINQFVRLLHSKSISSFLVTNAQF PDAIASMDPCTQLYVSIDASTKESLKKIDRPLFKDFWERFIQSLKELSHK GQRTVYRLTLVKGFNVEELHDYAKLVALGRPDFIEIKGVTYCGTSKASTL TMENVPWHEEVVNFSQTFADMLEDYEISCEHEHSNCILVSHKKFHIDGEW KTWIDYKRFHELVSKFDVNDPSTRFTASDYMVKTPDWAVYGAVERGFNPS QTRVHRKGKKGVKSEAS back to topmRNA from alignment at LSalAtl2s838:224621..231489+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011892-707739 ID=EMLSAT00000011892-707739|Name=EMLSAT00000011892|organism=Lepeophtheirus salmonis|type=mRNA|length=6869bp|location=Sequence derived from alignment at LSalAtl2s838:224621..231489+ (Lepeophtheirus salmonis) ATCAAGGACCCTAGATATTCACTGAACTCAAGGGATTATACTTTTTTAGG
TATTATACTATTCAATTTGATATTATCTATTTAGCAAAGGATGTTCACCA
CTCAGGAATTAAATAATAATAACAAATTAATGGGACAGCTAATAAACACC
GGATTTACATCATTAGTCATTACATATACATACATATTTTGTTCAATCAA
TGCTGTTGTGAGGGAATCTGATTTGAAATATGGAATGGGTCATCAAATTG
TACGAAATCTTGCCCTATTATATATATATTTCACCTGAGAATACACAGTA
GTACAACATGTTCTACATGAAAAAATGAATACTTAAAGGCATTAAAGAAA
TATATACCTATACATATATATTGAAGTATGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGGATGAAAATCCAGTGTATATTTTA
TCTGGCCCGTTTTTTGGAATTAGTAATCGGAAGAAGGAACTTTTTTTTCC
TTAGCAGCTGTCATTATTATTTAATTCATGAGTAGTGAACATCCATTAAT
AAATATATTCAAAACCCTGATTTAACATTCGTTTGTTTTCATAAAAGAGG
GAGCATAACCATGAGAATTTGTTACAGAGATATAATTGTAAGCCCCTGTT
GGACCAAGATTAGAATTGGGGATCGAAATTAGATTAATTCAAGCAAATGT
CCTTTTTTTATATCCTTCTTTTCTTATCAAAACTGGTTGTAGCATTATCT
TTCTCTCCTCCTACCATTCTTCAAATTTTCAGGGTTACCATGTTGATTTT
TGGTTTCCACTTTACACTGGATTTTCATCATTGTATATCAGAGGTGTCCG
CAGGAAGTGGGCTGGAGGTAGTATTGTTTCAGTCTTTATTTATTCGGTCC
TTTCCAGTATTAGGACGGGTTGTTAAGACTGTTGGTCCTTCATATTCTCA
ATACCACTAGAACTGATTTTTCAAAAAAGTTGAGTAACGTCATCAAGGAC
CAAACTTTATAAGTTTTCAAACTGATCTGGACCAGAACGAGACTGAACTA
GAACAACACTAGCTGGAGGAGCTTGAGCCCCTCCCCCATCCTGAATCAAG
GATAAAACTCAAAAGTTATTGCTTTGTGGAGAAAATTTAAAATAGCGAAA
CGGATAAAAAAACATTTTTTTTAAATAGGATATTTGTTAAAAATTATTGT
CCAAAAAATTGATCTAAAGTTTTTAAAGTCCCACACCCAAATAAAATCCT
GCAGACACCCCTGTCTTCATAATTACATACAGCCCCGTCTCAACGGGGAT
ATGCGAATCGGAAAAATGGGATATCAGTGGGAACATTTGAGAATTTGTAT
TGTTTTGTGTAAATGTTTATTGTCAAAAATATAGAATTTTTAATTTATAA
AGAAAGGTCCTTTTCAAAAAACGGTTCTTTTATAAATAAAAAGTGATATC
AGAATTTCATCACAATTTTTAAAAGTTTTTAAGCTCCTCAAAGAAAGAAA
CAAAGGACGGCTCCGGCTACAGAATATAGCTTATTATATCAGGAATTTTA
AAGACATTTATTTATTAAGCTTCAATCGGTGAATTCACACAAAGGGTGAC
TTATTGATATTAATAAAAAATTAGAATATCTCTTGATATTTTCATTTCAT
GATAATTATATTACTCTACCCTAGTTTCAAGGACATTAAAATGCTGTTTT
TAAAGTTGACTGACTACATTCTTATTGCATAAAGGGAATGCTAACTTAGC
CCATTATATTAAACGAAAAGATTTGCATTCTTCATCAGTCTTTTTTGGAA
TAGATTTCTGAATTAATAAAATAGAAAACAACATTATACAGTATTATTGC
AACGAAACTATATAATTAATTATTTCATATCGTTATAATTGATATAATAT
ATTCAAGCAGCATTCAATTGAAAAGAAAAAAAAATCAAACCATGACATAA
CTTAAAATCTTAAATAAATGACGACTAATTTATCATTTTAGTACATTTTT
TTTATATTATGCTTTAAATGTATTAAGGTATTTTTGATATCTGACTGTTT
GCAATGATCAGGGCATTAATCTTGCATTTTTAATGTCAAGTCATATGTAT
ATTTTATCCAGAACTTAATGCATTTTAACCCTTTTGCATCGGGGGGGCAC
TAGTGTTCTATATTTTGATTCATTCGTCATTCTATTATTTTTCATGATAT
TTAAGATATTTTAGAAATATTATGAAGAATAATAGTAGATCAATAAAATT
TAACTAAACATTTTATCATAGAACTTTATGTTCGTGCTTTATAAGTCTTC
AAACTATGTCATTTTTTTGGAATTCGATAACATAAAATGCMTGTCATGTA
TGGAMTGTTTAAATTTTTTATGGTTTTTTWAATATTTGTCTAGTGTAAGG
AAAAATTGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNAAATTTCCCTTTGTTTCGATGAAAAATGAAAAAGTTTTGGGAGTTT
AAAATCGTTGGGGCACTGATGTCCCTCTGGGTTTCAAAAGTATWTTTATC
TCTTTTGTATAAGATTTTAAAAATTTATAGCATTTTAGATTAAGTAGAAA
GTGCTGATACAGAAGACATTAACAATTTATTAAATAACTATGGTATAAAT
AGGTTATTATAGGTGATGAAGCGGTTACCACAGAAACGAATGCATAAGTT
GTTTCATTGACTCCTGAAGACAACATTCATGTCGTTATAAATAATACTTC
GAAATTTTCACTATGATGATCATCTCAAAGATGATAAAGTGACAGAAAAT
TTATGTTAAGACCACTGATAATCTATCTGAACGAAAGGTTCACAAAATTA
TTGTCCTTCAATTGTAAAGCTCTACAATAAAGGGCTGGAAGCGAGTTGAT
CACGTGGATCAAAGAAGCTATATCTTCTAGATATAGCATGTGTAAACGAT
ATATCCATTATCACTTTATATATCCCAATAAATTATTGCTCCTTGACCAG
AAAGGAGCAATTGCCAAGAGTCTGATTAAATATTATGAAGGGCCTCAAAA
GGCAATCTAATCGTCTAGACCAACGAAAATCAAAAGATCAATCTCTTACA
ATGGACATCCATCGTGGACATTTACCAGAGTTTGAACCAAAAATAAAAAG
ATGTGCATATTGTGCAAGCATAAATATAGAAAATCGAACATTGGTCATTT
GTATTGCTTGTAATCTTGTTTCCAGCTAAGTTAGAGATAGGAATTATCTC
TAAATGTGTCACATGTAAAGCATTAATTAAATTAATATTTTTCAATTATA
AAAGGTAGAATTATTAATTGTTTGAATTAGAAATAAAAAGTATTTAATGA
ATATAAAGAATTCATCTCCATACATGCTCTATACCGTAACTTTAGTATTT
TGTTTATACATAATAAAAAATTACGTTCATMCCCAGTGAGTGACACGAKT
AGCCAATCAAATTTTGACGAAGCTATTGAAGTTAATAAAAAAATTATTTC
TAATATGATGAAAAAGATCAAGAATTGACTATAACTATCTTAGGTTTTCT
TTTCAATTCCTTGTGGATCTGAAAGGGTTGAAATAATGAAAATGTTCATA
ATATCTCGATATCATTAACATTTACAAGTTATTTAAATGATTAGAATAAC
CAAAAAAATACACGCAAGCTATTTTTTTTTAAATCTCTCAACCTTTCTTT
CTCGTATTTCAGCAATCAATCGTAAGCGCGTTCATCAACAAACAACGTGG
TAGGATGATAAAGGAATGGACTTTAATAGGACCCTTGACGATTCCTTTAT
TAATCGTCATTGCCGTCATATCAACACTTATACTACGAAGACGTAAATCC
TCCATCCCTATCGACATATCTCCAGTGAAGAAGGCCAAAGAAGAGACTCA
AACGAGTTGTTGCGGTTCGAACGATTGTTGGTAATATATTTCTTTATTTT
GACGTCAGAGTATCATGTGTTTTTAGAGTTTTAAATGGACTTTTAATTAA
TTATGTATAATTTTTGCATCCAATGTGCAAATATCAAACTTTGATCGATG
TCAATGGATTAAATTTTATGAGGAAGATTTTAATAGTTGATCTCTGCAAT
TGTCTACAAAATTATATTTTTGTGACATGATGTGCCCGATGACGTCATTT
TGACACGTGATATTAGTTCTAATTTAAAATTGCATCTGTTTTTAGCGGAA
ATGACTCGTCCGACTCTTCCATCAAAAAAATCAAAGTGATTTATGGCTCA
GAAGGTGTATCAAAAGAACTAGCTCTTTCCATTAAGAATGTTGCTTCCGA
CTTATCCGTTGAAATACTGAGCAGCAAAGACTATTATCCTGGAGATGAAA
TCCTGACAGATGTGAAGGAAACTGGACTTTTAGTTGTGGTGATTATATCC
ACTTACACTGAAGGATTACCTCCACCCGATGCCAAGTATTTTTATTCATG
GTTTGAGGAAGAGGCAAAGGACTTTAGGTTTGTACATTTACTCTATGGAT
GAATGAGAAAGTGCCCTTAACTTTTTCTTGATAACTAGAGTTCAACACAG
CATCTTAAAAGGGCTAAAGTATTGTGTCTATGGACTCGGACATTCTGGCT
ATGGTCAAGAGKATTATAATGTTACGAGTAGGAATTTGGACAAATTTTTC
CGACAATTGAGTGCTGAAACTTACTTGCCTCTCTCTCTAAGTGATGAAAA
TGATGGAACTGTACAAGAAGAATTTAACACATGGTCAAAAGCCTTAATGA
AAAAAATTAAGGGGAAGCAAAATGGATTGATAAGTGAGGCGGGGAAAGAG
ACCATTCAAGATTCTGACACTGATGAAGAATACAGTGATGAGGAGGAAGA
AGAGAACGAGGAGGATGATGGACTGGTTGATATGGAAGATATGGGTGTCG
TAATGAAAAAAGCGAAAGAGTTCAAAAATTCAGCACCGAAAGATATGGTG
ACTCCAACCTTAAGGAAATCCCTCACAAAACAAGGCTATAAAATAATTGG
AACACATTCGGGTGTTAAGATCTGTCGTTGGACAAAAGCCATGCTCCGTG
GAAGAGGCGGCTGTTATAAACATACGTTTTATGGGATTGAATCCCATCGA
TGCATGGAAACGACTCCTAGTTTGGCTTGTGCAAATAAATGTGTTTTCTG
TTGGAGACATCATTCAAATCCTGTGGGTACGGAGTGGAAGTGGTCAATGG
ATCCTCCTGACATGATACTTGATGGTGCGTTAGAAAATCATTACAAAATG
ATCAAACAAATGAAAGGCGTTCCTGGAGTTTTGCCTGAAAAACTTGCTGA
GGGTATGGATGTACAACATTGTGCCCTGTCACTTGTTGGAGAGCCCATCA
TGTATCCTGAAATTAATCAGTATGAGTCAATTACTTTTTTAATCAAGTAT
TCTATTAATAAATATTAACATGTATTAAATGTACTTTACAGATTCGTCCG
ACTTCTTCATTCCAAATCAATTTCAAGCTTTTTAGTTACGAATGCCCAAT
TTCCAGACGCTATTGCTAGTATGGACCCGTGTACCCAGTTGTATGTTTCT
ATTGATGCTTCTACAAAGGAATCTCTAAAGAAAATTGATAGACCTTTGTT
TAAGGACTTTTGGGAGAGATTCATTCAGAGTCTGAAGGAATTATCTCACA
AGGGTCAAAGAACTGTTTATCGCCTGACCCTGGTGAAGGGATTTAATGTG
GAGGAACTCCATGATTATGCTAAACTTGTAGCTTTAGGCAGACCCGATTT
CATTGAAATCAAGGGGGTAACCTACTGTGGAACATCCAAAGGTGAGTTTT
GGTAACAACAAACCATTTTATATGGAAATATATATATTTTCATTTTGGGA
TCAATGGCATTTTTATTAGCATGAAATCTTTTACTTTATAAGTCAAGGTT
TTGTTTGTAATTAAGCCAAGAAGAAAAAAAGTATTTATTTAACCATAAAT
ATTATGATATAAATATCTTGGTGGTATTAATATTTGCGTAAGATAATCAC
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCAAGATTAAATATTCATTTATCATGTTTTATTT
GCCAATGCTTGCAATTACAGAATTAAGGAAAGAAGTAAAACTTTCCCATT
TCAACCTGCTTTAAACATATTATATAATGTACAAGTATTTTAACATAATA
TTATACAATATATTGTATATGAACTTATTTCCAGCCTCTACACTAACAAT
GGAGAATGTACCTTGGCATGAGGAAGTTGTCAACTTTTCTCAAACATTTG
CGGATATGTTAGAAGATTATGAAATATCCTGTGAGCATGAACACTCTAAT
TGTATACTTGTCTCGCATAAGAAATTTCACATCGACGGAGAATGGAAAAC
TTGGATTGATTATAAAAGATTTCATGAACTCGTATCTAAATTTGATGTGA
ATGATCCATCAACGCGTTTCACGGCCTCTGACTATATGGTAAAAACCCCT
GATTGGGCTGTATATGGCGCAGTAGAAAGGGGATTTAATCCCAGCCAAAC
GAGGGTGCATCGGAAGGGTAAAAAGGGTGTTAAATCTGAAGCATCTTAAT
TATGAATTGGACTTTGTGCTATGTTTCTAATAAATATATACCTACATACG
TTTTTAATATTATGTATGTCAGTAAAACCGTATGCACATTGTCGTATGAT
TACTCATTTATTTCCATGACCGCATACTAACCTCAAATCATAATATCTCC
TATACTTACTCAATGCTCAACCCCTTTTACTTTTTCTTCTTCTTCATTTG
TGTAATTTTAAGACAGTTC back to top
|