EMLSAT00000011894, EMLSAT00000011894-707741 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011894
Unique NameEMLSAT00000011894-707741
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s838supercontigLSalAtl2s838:81603..84688 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011894 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011894EMLSAG00000011894-694660Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053199EMLSAE00000053199-762127Lepeophtheirus salmonisexon
EMLSAE00000053200EMLSAE00000053200-762128Lepeophtheirus salmonisexon
EMLSAE00000053201EMLSAE00000053201-762129Lepeophtheirus salmonisexon
EMLSAE00000053202EMLSAE00000053202-762130Lepeophtheirus salmonisexon
EMLSAE00000053203EMLSAE00000053203-762131Lepeophtheirus salmonisexon
EMLSAE00000053204EMLSAE00000053204-762132Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771654auto771654Lepeophtheirus salmonispolypeptide
EMLSAP00000011894EMLSAP00000011894Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011894

>EMLSAP00000011894 ID=EMLSAP00000011894|Name=EMLSAP00000011894|organism=Lepeophtheirus salmonis|type=polypeptide|length=467bp
MLHHIRLSECEDLSHGVTKNLLMNLQRVSCMKPPFGRAFHMKSMLFMSNF
QLDSNSGINTEREPIIRTNRRTIYTQGRPPWYNSQGQLKEPFVIGICGGS
ASGKTTVASKIIKELGVPWVTLLSLDSFYKVLNEEQHNLACNNEYNFDHP
DAFDFELLSKTLKRLKEGKKVEVPIYNFVTHRRETKTTSMYGANVLIFEG
ILAFHRKDILNFLDMKIFTQLDARGFKLRPKLVINAIESQPPDTLQLLPP
TPQIRGLHTYIRNRNTPRDEFIFYSKRLIRLVIEYALSLLPYLPVTVDTP
QGVPYEGKLCSVKKVCGVSILRAGETMEASLTEVCKDIRVGKILIQTSHE
TGEPELYYLRLPKDIKDFQIILMDXTVATGAAAMMAIRVLLDHDVPEGNI
SLVSLLMAXSGXHTIAYAFPEVKIVTTAVDKEINEKFHVVPGIGNFGDRY
FGTEPMICSFETKKWKH
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mRNA from alignment at LSalAtl2s838:81603..84688-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011894-707741 ID=EMLSAT00000011894-707741|Name=EMLSAT00000011894|organism=Lepeophtheirus salmonis|type=mRNA|length=3086bp|location=Sequence derived from alignment at LSalAtl2s838:81603..84688- (Lepeophtheirus salmonis)
ATGTTGGTAATTGAATAGTGGGAATATAATTTTTGATAGTATTCTTTGTA
CCATTTGAATGCTATTAAGACAACTCGGAGGATAATTTCATATATCTTTT
AATGTATATATATATATAAATTATCGTCACTCTCCTTAACGACAAAAAAG
GGAAAAAATATCATCTTAAACTCGTATTAAAGGTAAGAAAACAAAACTTG
AGAACATGTTTTTACCTTTTATTTTCTTTGTCTCAATGGGAAATAGTCAC
CATTTCTATTCAGCATAGTTGCATTCCTCCTAAAGGATTGGGGGAATCCA
CATCGATATAGTATCCTGCTGTCTCAATATATGTGGTAAAATCAAAAAAA
TACCTAGTTTCATAGAAGTTTATTTTTTAGTAAGTAGTTTTATCCATTCT
TTCAAATACAAAATATATATAATATTATTCAATTATTTTTTTTTAAATGG
ATTGTAGAGTCAGTCTAAGGACATTTTATTAGCTAGCGGCTMMAGCCGTT
TTTGTTATCACTAATAATATACCCTACTGTTAATGCCACATGTTTTGAAT
GAAAAGAAAAGTGATATATGCTTCAAACTAAGCAGTTTCCCAGAATAATA
TATTTCCCCATAACTTTCTTACATAATGTTCTAACAAACTTTGCTACATT
TTATGAGTGTTTACATAATTAACTAAACATATTGATAATATTCAGTGAAA
GAGTTTGGATTTTCCTCTATTTTAAAACACCGGTATTGCACACGTGCTTT
GTATTTATGCCTGTATTACGTATGCTCAATACACTAACTACGAAAACTAC
CTTTGAGTAAAGAAACGAGTAATCGATTGTTACTCTTTAATAAGTAATCA
TATCTCACTAGAGTCGATAAAAAAGCATATTTTTTCCGTTATATCTAGCA
TCATATTCGCCTAAGCGAATGTGAGGATTTGTCGCATGGTGTAACAAAGA
ACTTACTCATGAATTTGCAAAGAGTGTCTTGTATGAAGCCTCCATTTGGG
CGTGCTTTCCATATGAAATCAATGCTGTTCATGTAAGATAAGCATAAGGA
GGGGGAAGTTGCTACTTCTACATACTTAGAACTTCATTCAGTGAAGGCAG
CTCTCTTTCTTCTCGGAAGCTAGCTTTCCACACTCCGAAACACGCTACTT
TTTTATATATATTATTATATGTACACTCAAGAGAGAAACGGAATAATGAA
AATAGTTTAATTTCAATATTAGGTCCAACTTCCAACTTGATTCTAATAGT
GGTAATGAATTGATTGAGCACTGAACAGTCCTTTCATAATCTTGAATAGT
TCTTCAATATTTTTAGTTCTTACTAATTAATTTATACTTATTTTTTATCT
TCATATTTGTAGGAATCAAGTATTAGGCGAGAAGTCCAAATTAGCTCAAA
ATGGAAAGCAGTCTTACTAGCGTGGACTCTGACGATTCTAATAATGCTCT
TGAAGATTTAGAAATAGATAACCTCAACGATATACCAGAAGATGTGATTT
TTGGACATCAGGAATCAATTCTTTGGTCAGATGAAAATGATGAAAACTCC
GATAGTCGTCCTCGATCTGCTACAGAAGTTAGAGATCCACGAGTCAGTTT
GAGAAGACGGAGAAGAACATGTTCTCTTTCAGCTACTATTAGTACTGAGA
GAGAACCAATTATACGTACGAATCGGAGGACTATTTACACACAAGGAAGA
CCTCCATGGTATAATTCTCAAGGGCAATTGAAAGAGCCATTCGTAATTGG
AATATGTGGAGGATCTGCATCTGGTAAGACGACTGTTGCTTCGAAAATAA
TCAAGGAATTAGGAGTACCATGGGTTACTCTGCTCAGCTTGGATTCGTTT
TATAAAGTGCTGAATGAAGAACAGCATAATTTAGCTTGCAATAACGAATA
TAACTTTGATCATCCTGATGCATTTGATTTTGAACTTTTATCTAAAACAC
TTAAGAGGCTCAAAGAAGGAAAGAAAGTGGAAGTCCCCATTTATAACTTT
GTTACACATCGTAGAGAAACAAAGACTACGTCCATGTATGGAGCTAATGT
ACTAATTTTTGAAGGGATCTTGGCTTTTCATAGAAAGGATATTTTAAACT
TTTTGGATATGAAAATATTTGTTGATGCAGATCCAGACATTCGTCTCTGT
CGACGTTTAAAAAGAGATATCCAACAAAGAGGTCGTGAAATGAAATCTGT
ATTAGAGCAATATGATCGATATGTCAAGCCAGCATTTGAATATTACATAG
CTCCAACCATGGCACATGCTGATATAATTGTTCCTCGTGGAGGAYAAAAT
AAAMTAGCCATTGATCTGATTGTTCGACATGTACAGACACAACTTGATGC
TCGTGGATTCAAATTACGACCCAAACTTGTGATAAATGCAATTGAGTCTC
AACCTCCTGATACTCTCCAACTCCTTCCCCCAACCCCTCAAATCCGAGGT
CTTCACACATATATACGAAATCGTAATACACCTAGAGATGAATTTATATT
TTATTCAAAGAGACTGATTCGTTTAGTGATTGAGTATGCATTGTCTCTTC
TTCCCTATTTGCCTGTTACAGTTGACACTCCTCAGGGTGTTCCATATGAA
GGTAAATTATGTTCGGTCAAGAAAGTATGTGGAGTCTCTATTCTTAGAGC
TGGCGAGACAATGGAAGCATCCCTGACAGAAGTTTGTAAAGATATCCGAG
TAGGTAAAATCCTCATTCAGACCAGTCATGAGACTGGAGAACCTGAACTC
TATTATCTTCGGCTACCAAAAGACATAAAGGACTTTCAAATAATTTTAAT
GGATGSTACAGTCGCAACMGGGGCTGCAGCCATGATGGCTATTCGTGTAC
TTTTGGATCATGATGTGCCTGAAGGAAATATCAGTTTAGTTTCCTTACTT
ATGGCTGMATCTGGAGMACATACCATTGCTTATGCTTTTCCCGAAGTTAA
AATTGTGACAACTGCAGTGGATAAAGAAATCAATGAAAAATTTCATGTGG
TCCCAGGAATAGGAAACTTTGGAGATAGATACTTTGGGACAGAGCCCATG
ATCTGTAGCTTTGAAACTAAGAAATGGAAACATTAA
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