EMLSAT00000011909, EMLSAT00000011909-707756 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011909
Unique NameEMLSAT00000011909-707756
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s83supercontigLSalAtl2s83:645541..647862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011909 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011909EMLSAG00000011909-694675Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053274EMLSAE00000053274-762202Lepeophtheirus salmonisexon
EMLSAE00000053275EMLSAE00000053275-762203Lepeophtheirus salmonisexon
EMLSAE00000053276EMLSAE00000053276-762204Lepeophtheirus salmonisexon
EMLSAE00000053277EMLSAE00000053277-762205Lepeophtheirus salmonisexon
EMLSAE00000053278EMLSAE00000053278-762206Lepeophtheirus salmonisexon
EMLSAE00000053279EMLSAE00000053279-762207Lepeophtheirus salmonisexon
EMLSAE00000053280EMLSAE00000053280-762208Lepeophtheirus salmonisexon
EMLSAE00000053281EMLSAE00000053281-762209Lepeophtheirus salmonisexon
EMLSAE00000053282EMLSAE00000053282-762210Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779098auto779098Lepeophtheirus salmonispolypeptide
EMLSAP00000011909EMLSAP00000011909Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011909

>EMLSAP00000011909 ID=EMLSAP00000011909|Name=EMLSAP00000011909|organism=Lepeophtheirus salmonis|type=polypeptide|length=383bp
MKRFSVYSLLFSLIMNHVEAAWSLQDQQILVSEMELVLLQQNVEKEEDLH
RDLVLEDXGFAAFFWRQHXEPPFHKIVXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXYIKNPNSPAALTDTSPCSFTINKCAPDVCDFRLDFEMFSISGPS
STDETNGGECRDTMMVTTPTGQRTPTICGSNSGQHIYIDVGRMPTDSASI
AFQFMGAFNRMFDIKVTQIPCNSESAPPNGCLQFHTGTAGMFETFNFDGP
LQQHLASQTQQVCIRQEDGFCCIDYQVCSDENSMTLGNGGIADFTKAGVG
TDCSEDFIIIEGSSATGQRDLQQRYCGGKLSDVTKAEDSTAIRDCTLPFE
VTFVTDNIAEAVANAKVSRGTCLKYNQVPCNAI
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mRNA from alignment at LSalAtl2s83:645541..647862+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011909-707756 ID=EMLSAT00000011909-707756|Name=EMLSAT00000011909|organism=Lepeophtheirus salmonis|type=mRNA|length=2322bp|location=Sequence derived from alignment at LSalAtl2s83:645541..647862+ (Lepeophtheirus salmonis)
AACATCTAATGCCCTTGAATTCTATACTCAGCATTTTTGAAATATTTACA
ATATTATATTTTTGCGATTTAACCTTTTTTTTTTTTTGCAGTGGAAGGGA
AAGAGGAAGAAAAAGTTACTCAGTATTTTTACGATTTCTTAAATGGGTCA
AAGGGAGCTAAAATCTAAAATATTAAACGTCTTCGTTTCAAAAGCGCACA
ATACTTCATGAAGATCACTTCCACAAGAATTAATCTAGGAATGAGGACCT
ATTTAATATCAACTATTTTATGTTTGACACACTTTGAAGTTGTCTTAGGA
GCTGACGAATCTCACGAGATTCAAACTGACTCCAACGAAAGGAATGAAAA
GGGTAAAGCATATTATTTGTATGTTAATTCATAACATTATTTGTAAAATC
CATACTCAGTTTTCAGTTTATTCTCTATTGTTCAGTTTAATAATGAACCA
TGTCGAAGCAGCATGGTCCTTGCAGGGTAAGTACATAAATCTGAATATGC
TGTGTAGGAAAACGGAATTATTTTGATTATTTTTTTTTTTTCAGATCAAC
AAATACTGGTTTCCGAAATGGAACTTGTTTTACTGCAGCAGAATGTGGAG
AAAGAGGAGGATCTGCATCGGGATCTTGTGCTGGAGGGTAAAATAGGATT
TATTTAATTGTTTACCTTCWAATAATATTTAATTTAAAATGTTTTAGATT
MGGGGTTTGCTGCGTTTTTYTGGMGGCAACATGMGGAGCCTCCATTTCAC
AAAATTGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTACA
TAAAGAATCCAAATAGTCCAGCAGCCCTTACTGATACCTCTCCGTGCTCC
TTTACAATTAACAAATGTGCCCCAGATGTATGTGATTTTCGGTTGGATTT
TGAAATGTTTTCAATCAGTGGTCCATCCAGTACTGACGAAACTAATGGAG
GGGAATGTAGGGATACAATGATGGTTACCACAGTGAGTATAAGTTCAATT
ATCCTTTAACATTAGCTTTATATCATGACTATCCAGCCAACTGGACAACG
CACTCCAACAATTTGTGGCAGTAATAGTGGACAACATAGTGAGTATAAAA
TATAAAATATTATATTGCTAACCTACATTCAACTTATTTAAGTCTACATC
GACGTGGGCCGAATGCCCACGGACAGTGCTTCAATTGCATTTCAATTTAT
GGGGGCCTTCAATAGAATGTTTGATATCAAAGTTACTCAAATTCCTTGTA
ACTCGGAGAGTGCGTAAGTATTTATAAATATTTTTAGATGAGTTTTTGCA
CAAAGATATCTTAAATTTGCAATTTGAATCAGACCTCCAAATGGCTGTCT
CCAGTTTCACACTGGAACCGCAGGTATGTTTGAAACCTTCAACTTTGATG
GCCCACTACAGCAGCATTTAGCTAGTCAGACTCAACAAGTTTGCATACGA
CAAGAAGATGGTAAGTATGAGCTAATGATGTTAAAATAAAATGATTTACG
TATTTTCTTTTAAATATATAGGATTTTGCTGCATCGATTATCAAGTTTGT
TCGGATGAGAATTCTATGACACTTGGTAATGGAGGAATTGCCGATTTTAC
TAAGGCTGGAGTGGGTACTGATTGTTCAGAAGACTTTATTATCATTGAAG
GTTCATCTGCTACAGGGCAACGAGATCTTCAACAGCGATATTGTGGAGGC
AAGTTGTCTGATGTAACAAAAGCAGAAGATAGTACAGCAATCAGAGGTAC
GAAATTGTCATTGGATGTGTACATTCTATTACTATTTTTTCTTCTATTTC
AGACTGTACATTACCATTTGAAGTAACATTTGTAACAGACAATATAGCTG
AAGCTGTAGCGAATGCCAAAGTTAGCAGAGGAACTTGTCTCAAGTACAAT
CAAGTACCCTGCAATGCTATATAATACGTTATATATTATATTCATAAAGC
TGGAAAAATTAGTATTTGTTTTATAAACAAATAATCCCCTTCAAACTATT
AATTATAATATAATTTTTGTTTGAGTTTTTAAATAAAAGATACTCTTATG
TTAAGTTAATAGTTAAATAGGATTTGTTGTTTTATTATTATGAGCTGTAT
ATGAATTGTATACTCATTTCCAAATCCGATATCTAAAATCTATGGGCCCA
GTCCTCATGGTAACAAAATATATCTGTGTAATTATATCTAATTTTTCTGA
TACTTGAATAGATTGTCAATATTCAACTTTAAATATCTTACCTTATTTGA
ACTAATCACAATGAGACGGAAC
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