EMLSAT00000011915, EMLSAT00000011915-707762 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011915
Unique NameEMLSAT00000011915-707762
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s840supercontigLSalAtl2s840:73..4762 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011915 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011915EMLSAG00000011915-694681Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053305EMLSAE00000053305-762233Lepeophtheirus salmonisexon
EMLSAE00000053306EMLSAE00000053306-762234Lepeophtheirus salmonisexon
EMLSAE00000053307EMLSAE00000053307-762235Lepeophtheirus salmonisexon
EMLSAE00000053308EMLSAE00000053308-762236Lepeophtheirus salmonisexon
EMLSAE00000053309EMLSAE00000053309-762237Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767932auto767932Lepeophtheirus salmonispolypeptide
EMLSAP00000011915EMLSAP00000011915Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011915

>EMLSAP00000011915 ID=EMLSAP00000011915|Name=EMLSAP00000011915|organism=Lepeophtheirus salmonis|type=polypeptide|length=574bp
MSIDVTEGDDTVLDCRFYSQFLSNDTSKYWIRKNRNGYDNXAIGQTPYEH
KYRVELSDEGTYNLRIINATYDRDNGDFECRMKKGGTGETLHSKSVKLTV
LLKPSPPEIIIDAPSVTEDQLTNLTCSSIGGSPPPTMEWFRQGRSTPLNA
LSIPGANKDVPTKSILTIKPSKEDDNSSYRCQIWNRALKEQNKLETSTKI
HVNYFPRVTVGPENPLKVEKDETASLECKVDSKPRVNSVKWTREGRFINT
DFKHTIPRVSLSDAGSYLCSADNNLGRVGESELKLDVLYAPVFNLSRSVE
ASEGEEVNIECHVSSNPRPSSIQWYKEGDKDFLHNGRILTLNSITASDDG
EYICSATNRIQPTGKPEYSRTRNSSVIINVRHKPGKAFIQPEKPIAVEGK
SITLTCGANPPGFPTPRYTWFKDGNQILSGSGKNPDFVIGSADLDNAGKY
ECRPANELGSGTLAEVKLLVYQAPKIRTPLQPTIMKRARDTGFHSTCSAV
GKPKPKVHWFKDGREITEEGEFANLYEITTSEQVTLQNVAVYVLSTLNFV
GSERISENQLMPTDRGHYTCQFXQ
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mRNA from alignment at LSalAtl2s840:73..4762+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011915-707762 ID=EMLSAT00000011915-707762|Name=EMLSAT00000011915|organism=Lepeophtheirus salmonis|type=mRNA|length=4690bp|location=Sequence derived from alignment at LSalAtl2s840:73..4762+ (Lepeophtheirus salmonis)
TACAGGAGCTCTTGATTTTTTCACTTGATATACTTATTATTGCAATTGAT
TCCCTGTAAAAAGTAGTTGTACAAAATGCTATCAAAGTTCCTGTGTGATA
AATAATATATATACATATATATACGTTTATTCAATACTTGTAGACATTTT
TTAACTGGTTTTCTCTTTCTGTTTTTAATTTTGTATCTATGTAAGAAATG
TAATGGACAAGTATTTGAAGAAGAAGAAAAAATATTTAAAAGTAACCAGT
ATCACTAACCGCACTTTCTCTCCGTATTTCCATTTCTCTATCTCTTTTTA
TTTAAATACACACTGGTCATTAAATTTTGATGTACATAGACTTACTGACC
TTCTCTAAATATATATATTTCATATTTATAGGTTTGTTTCTATTAGTATC
TGGAGAGGATGTAAGTGATGAAATCATGTCCATCGATGTCACCGAGGGAG
ATGATACCGTATTAGACTGTAGATTTTACTCACAGTTCCTAAGTAATGAT
ACATCCAAATATTGGATTCGGAAAAATCGAAATGGTTATGATAATMTAGC
CATAGGTCAAACTCCTTATGAACATAAGTACAGGTAAATATAGAAGGCAT
TACAAAAAAGTAAGGGTCATAACTTTTATAATTGATTTAATTTGCAGAGT
TGAGCTCTCGGACGAAGGGACTTATAATTTGCGTATTATAAATGCAACCT
ACGACCGAGACAATGGGGACTTTGAGTGTCGTATGAAAAAAGGCGGTACA
GGAGAGACACTTCATTCCAAGTCAGTCAAACTGACTGTTCTTCTTAAACC
CTCTCCTCCAGAAATAATCATAGATGCTCCTTCTGTGACAGAGGATCAAC
TTACTAATTTGACATGCTCCTCCATCGGTGGATCACCTCCTCCAACCATG
GAGTGGTTTCGACAAGGTCGTTCTACTCCTCTCAATGCACTCTCCATTCC
TGGAGCTAACAAAGATGTTCCTACTAAATCAATTTTAACAATCAAACCTA
GTAAAGAGGATGATAATTCTTCATATAGATGTCAAATTTGGAATAGAGCT
CTCAAAGAGCAAAACAAGCTAGAAACTAGCACCAAAATTCACGTTAACTG
TAAGTTAATTTAATTTTACTCAATTTCTATTAATTCATTTGTATAACTCT
CACAGATTTCCCGCGCGTAACCGTTGGACCTGAAAATCCACTCAAAGTTG
AAAAAGATGAAACTGCCTCCTTGGAATGCAAAGTGGACTCTAAACCCCGG
GTCAATTCCGTCAAGTGGACACGTGAGGGAAGATTCATCAACACAGACTT
CAAACACACTATTCCTAGAGTATCTCTCTCTGATGCAGGAAGTTATCTCT
GCTCAGCAGATAACAATCTGGGACGCGTCGGTGAATCCGAATTAAAGTTA
GATGTACTTTATGCCCCCGTCTTTAACTTGTCAAGAAGTGTCGAAGCTTC
AGAGGGAGAAGAAGTTAATATTGAGTGCCATGTGTCCTCAAATCCAAGGC
CCAGTTCCATTCAATGGTACAAAGAAGGAGATAAAGACTTTCTACATAAC
GGGCGCATCTTAACTCTTAATTCAATCACTGCCTCTGATGACGGTGAATA
CATTTGCTCAGCTACAAATCGAATTCAACCTACTGGAAAGCCAGAGTACT
CCAGAACGCGAAATTCTAGTGTTATCATAAATGTAAGGCATAAGCCAGGG
AAGGCATTTATTCAACCAGAGAAACCAATTGCTGTTGAAGGGAAATCAAT
TACCCTTACATGTGGAGCCAATCCTCCAGGATTTCCCACTCCTCGTTATA
CTTGGTTCAAGGATGGAAATCAAATCCTCTCTGGTAGTGGTAAAAATCCT
GACTTTGTTATTGGATCTGCTGACTTAGATAATGCAGGCAAATATGAATG
CCGRCCAGCCAATGAACTAGGCTCTGGAACTCTGGCTGAAGTTAAACTTC
TAGTATATCAAGCCCCAAAAATTCGTACTCCACTCCAACCTACAATCATG
AAGCGTGCTCGAGATACAGGGTTTCATAGTACTTGTAGTGCTGTTGGCAA
ACCCAAGCCTAAGGTACATTGGTTCAAAGATGGACGAGAAATCACGGAAG
AAGGTGAATTTGCAAATCTCTATGAAATAACTACCTCAGAGCAAGTTACT
CTTCAAAACGTGGCCGTCTATGTCCTTTCTACCCTAAATTTTGTTGGATC
TGAAAGAATTTCAGAGAATCAATTAATGCCCACTGATCGTGGTCATTATA
CATGCCAATTCGNACAATGATGTTGATAGAACTGAAACAACCATGCTTCT
CAGAATTGAACATTCCCCTATTGTCGTCCATAGACATAACAAAGTTGCAA
GTGACGTCGGCAAGGCAGCTATTATTCGATGTCGTATGCAAGCTTATCCT
GCTCCAAGATTTGATTGGTCTTTTGGAAACTCCATCCTTCAAAGTGAAGT
TTATGAAAGAAATGTAACTTCTTTGGACGATGATATTTATGAGGGGATAT
TGAGGATTTTCCCTGTGACGGAAAGTAATTATGGGGAATATAGTTGTAAG
GGAGTTAATACTATGGGAGCACAAAAAACGATTATCAAGCTTCAACCAAC
TGGAAAACCCGAAAAATCAACTAATTTACGATCTGTTGATCAAGGATATA
ATTATATAACCTTAGCATGGGATGAAGGCTTTAATGGCGGYTATAACAAT
ACTGTTTACATTMTACAYTACCGTAAGAAGGGAGAAGACTCCTCTCCTGA
GTATGATGACTGTCAATACCACCCTTGCAACCTAACCAAGGTTGAACAAA
ATTCAGCCTATCTTGTTCGTGTTAAAGCGAGCAATATACGCGGAGAAAGT
AAATATTCTTCCGAAATACTTGTTCGTACCGAGGTTGATGTCTCTAAAAT
ACCAGCAGCACAAGATGTTCATTTTGAAAGGTCAACCAGTACAGCCTCTT
TTGCTGTTAGTTCAGATTCTGAAGATTACGCACCTTTAATTGCTCAAGTT
GAGCTTGAAAATCCTGATGGTACATGGAAGTTTTATGATCAGTTCTCTCT
GAAAGAATCTAACCTAGGCCATCTTCAAATCCAAGAAGAAACTATTAATC
ATGTACGTGTTAGACTTTGTTTGGAATCCGAAGCTATTCTTTGTGGGCCA
TATACAGATGCAAAGATGGTTAATGTTCTTGAGAACACGAGCGATCCTAC
TTCAGGTCAAGGCGCATGGGTTATTGGCGTCATTGTAATCATAATTTTAC
TTGGAATTGGAACCTTGCTTCTCATCATAAAATGTTGTTTTTGTGGTCCC
AAAAAGAGTCAGAAACCAGAAGATAAACTCTCTGGAAGACCCAGCATTGT
CCACAATGCTCAACCCCCTCCTTATTCATTTGAGAACAAAGGTGTCGATA
CTCTCAAGGATGCCGACGAAGTTGCCATGAAGAACAATTTAGTCTATAAT
CCAAATCAAAATGGATATGAACAAGAATATCCAGAGCAAAGCAATAATTC
AAATAGCGCCAATGGTGGGAGCGTCAATTCACAAGACTCTTTGTGGAACG
TCAAAAATAATGGGGGAGGTGATAATAACTATATGGGTCAGCAACATATC
TACGGATATGAACCAGCTTCACAACAAGTTCCTCCACAAGGGTATCAAGT
CCAAATCCCCGGAAATCCGGACTACACGCATTATCCTTACCCGGATGAGT
ATTTAAATGAACGAAATAGGCATTATCTTCAAAATGATCCTTATGCCATT
CCTAGACAAAATTCACAGCAACGCATAGAAAGCGATTGTAAGTTTTATTA
TTTATTTCGATTTCCCCGCCAAGTTCTCATTGATTTTATAATTATTTTTT
TCAGATTCACCCTATGGGGACGTTACTGGTCTTCCAGATCCTTATATGGG
ACAGTTTGAAGGTGATGAGGCTCCAATTCAAGGTACGCATGAGGGAGGCC
AACCCTTTGACGAACACGACAACGATTTTTCATCACCTAACGGAGGTCGA
GGAAGAAGAATAATTAGAGAAATCATCGTTTAAATAATGTTGACATTAAA
TGCTTGATTGTATTACTCTTTTGAGTTCTCTCCTAGTCCATCGACGACCT
TATGTTGTTTTTCATCACCTCCCCCCTCCCCCTCTCAAACATTTGCGTTC
AACCGTTTTTCATACATTCTGAATAGAAAAACCGTTCTTTCCAATACCAC
GCCATTATTTTTTATAAATATATTGCTAATTATGAAACAAACTTTTTATA
TCTTATTGCTCAAAAAAAACAAACGAAGAATATTATTTTTAGATTGATTC
CTTCGCATATTTATATATCAATTTATTTTACGTTTCTTGAACGTAGTAAG
TAATGAACTGTAAAAAAAACAAAAAAAAAAAAAGGAAGCCGAATTCATTT
TCTAAGGAAATTTAATATAAAAAGTATTTTCTAATTGATACGAAAAAAAA
AACACAATTAAAAAATAAATAAAAATACATAGATTTTTTATATAGCAAAA
TTAAACTAAGATCAATAATACTTGTCTCAGATCTCATTATTGTATTTATC
ATAGAATCAAATGTTTCTTATAAATTATATTTTCTGCATTTTTATATAAT
AATAGTTATTATTATTATAATTTTTCATTTCTTTAGTGCGAATACATTCT
ATATTATTACAATGATATTAATTAGATATAAAGTGTCTAT
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