EMLSAT00000011958, EMLSAT00000011958-707805 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011958
Unique NameEMLSAT00000011958-707805
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s849supercontigLSalAtl2s849:136562..138420 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011958 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011958EMLSAG00000011958-694724Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053526EMLSAE00000053526-762454Lepeophtheirus salmonisexon
EMLSAE00000053527EMLSAE00000053527-762455Lepeophtheirus salmonisexon
EMLSAE00000053528EMLSAE00000053528-762456Lepeophtheirus salmonisexon
EMLSAE00000053529EMLSAE00000053529-762457Lepeophtheirus salmonisexon
EMLSAE00000053530EMLSAE00000053530-762458Lepeophtheirus salmonisexon
EMLSAE00000053531EMLSAE00000053531-762459Lepeophtheirus salmonisexon
EMLSAE00000053532EMLSAE00000053532-762460Lepeophtheirus salmonisexon
EMLSAE00000053533EMLSAE00000053533-762461Lepeophtheirus salmonisexon
EMLSAE00000053534EMLSAE00000053534-762462Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773032auto773032Lepeophtheirus salmonispolypeptide
EMLSAP00000011958EMLSAP00000011958Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011958

>EMLSAP00000011958 ID=EMLSAP00000011958|Name=EMLSAP00000011958|organism=Lepeophtheirus salmonis|type=polypeptide|length=363bp
CTAGGQPCVFPFTYEGFTFSACTTFEFGDIHWCAVSLNEVGEVSEYGECS
SSCPTEVTVTRAGCPTKSGDRCLFPFNYLGITYNGCTTVDFNIAWCATSI
DSTDEVEAYGLCSSSCPAESTLSSDACVANNDRACVFPFVYNGVTYGDCT
VTDNDGIPWCATTVDSNKEFLTYDDCGPNCPVDQATTVTPIVPTTPTLRP
GLSNNCPAIDGNSCIFPFLYEGVFYEKCTNIDNFGTYWCAISVTEDGCPA
MNGDRCLFPFILDGVTYDKCTNIAGTFYCATEVNSKDKLKSYGVCSSSCP
RDTTLASNVCGTVNGKKCIFPFIYSGVTYNACTNTDFGSTFWCATSVNAA
GVENSYGICNDAC
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mRNA from alignment at LSalAtl2s849:136562..138420-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011958-707805 ID=EMLSAT00000011958-707805|Name=EMLSAT00000011958|organism=Lepeophtheirus salmonis|type=mRNA|length=1859bp|location=Sequence derived from alignment at LSalAtl2s849:136562..138420- (Lepeophtheirus salmonis)
TGTACCGCAGGAGGACAACCATGTGTATTTCCCTTCACATATGAAGGGTT TACTTTTAGTGCTTGTACAACTTTTGAGTTTGGAGACATACACTGGTGTG CAGTATCTCTTAATGAGGTCGGTGAAGTATCGGAGTATGGGGAATGCTCT TCTTCTTGTCCAAGTATATAGCAATATAATTCCAATTTTTTCCTTTAATT TTTAATATTTATTATTATTTTTTCTTATTTCATATTAGCCGAAGTAACAG TTACAAGAGCTGGTATGTTCTATCCATATAATTTCAACTACAAATCTTCT AGTCTACAACTACTTATTTTGCTTAATTTTTTTTCTAGGATGTCCAACAA AATCTGGAGATCGATGCTTATTTCCATTTAATTATTTGGGTATCACATAC AATGGTTGCACAACAGTAGATTTTAACATTGCATGGTGTGCGACATCAAT CGATTCAACCGATGAAGTTGAAGCCTATGGTCTATGTTCATCCTCGTGTC CAGCTGAATCTACTTTATCTTCTGATGGTGAGTTATTTACTGTGTATTTT GTACATATAGATAAATATTACTTGTCTTTTAAAATCAGCTTGCGTTGCAA ACAATGACAGAGCATGCGTTTTCCCATTTGTATATAATGGAGTCACCTAT GGTGATTGCACTGTAACGGATAACGATGGCATTCCATGGTGTGCAACAAC TGTTGATTCAAATAAAGAATTCCTTACATACGATGATTGTGGACCAAATT GCCCGGGTAATACATAATTTTCTTAAAAGTCTATCTGAACAAGACTATTT ACTTAAGCCTTATAATTTTCCTAGTTGATCAAGCCACTACTGTCACTCCA ATTGTTCCAACGACCCCGACTTTAAGACCTGGATTATGTAAGTTATCCTC AAGGGGAAGTAAAGATATACTATTTAAACAATATTTTATTCAATATTTGT TTAGCGAACAATTGCCCCGCTATTGATGGAAATAGTTGCATCTTTCCATT TCTATACGAAGGCGTTTTTTATGAGAAATGCACAAATATTGATAATTTTG GTACTTATTGGTGTGCAATTTCAGTGACTGAAGATGGTGAGGCCTTTGAA TATAGAGATTGCTCGGATTCATGTCCACGTAAGTCAACTTTCACAATATC TGGTTGTACAAATTTGACTTCAATGTAAGACGAGCTTAAAATACAGTGAA GTCATAAGTTTCTAGTTTAACATGAAGTTGGATTAGTACAACCCAATCAG AAGGTTTTTTTAGTTGATATATGATAACTTTTTTTTTTTTTTCTAGGAGA AACAACTGTTAGCAAGGCGGGKAAGKGTATCACAATKTCTACTTATTATA CGTATCAAACAAGGTTTAATTTTCCTTCTAATTGAAAACTAGGTTGTCCA GCCATGAATGGAGATAGATGTCTGTTTCCTTTTATTTTAGATGGAGTTAC TTATGACAAATGCACGAATATTGCTGGAACTTTTTATTGTGCCACGGAGG TTAATTCAAAAGATAAGTTAAAAAGTTATGGTGTCTGCTCAAGTTCATGT CCAAGTAAGAACAGTTATTTTTTTAAAACTATTATACCTAATACAAATTT TATTCTAAACACACAGGAGATACCACACTTGCTTCGAACGGTAAGTAATA ATTGATTAAGGGATCTATTCATCATTACATTTTTTACTTTTTCAGTTTGT GGAACGGTCAACGGCAAAAAATGCATTTTCCCCTTCATATATAGTGGTGT GACATATAATGCATGTACTAATACAGATTTTGGTTCCACATTTTGGTGTG CCACTTCAGTTAATGCAGCAGGAGTTGAAAACAGTTATGGCATCTGTAAT GATGCTTGC
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