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Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s84 | supercontig | LSalAtl2s84:1272304..1281371 - |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011962 >EMLSAP00000011962 ID=EMLSAP00000011962|Name=EMLSAP00000011962|organism=Lepeophtheirus salmonis|type=polypeptide|length=1782bp
MPNVNLYSKGARIWLKDPETVWKAASVTQDYDGKVLHVEITDTLETESIN ISKESDLPPLRNPDILIGENDLTNLSYLHEPAVLHNLAIRFIDNCAIYTY CGIVLVAINPYSDLQIYGNDTISMYRGKNMGDLDPHIYAVAEEAFTRMER DSLNQSIIVSGESGAGKTVSAKYAMRYFATVGGTSQTETQVEKRVLASSP IMEAIGNAKTTRNDNSSRFGKYIEIDFNKQFHIIAADMRTYLLEKSRVVF QAEDERNYHIFYQMCAAREDEFMSCLSLEHPDDFFYLNQGSSPEIDGVDD LKEFMNTREAFHLLGIPEEDQFRIFQILAGILYLGNISVEPSSGRADSES SQITSDERIEEPQIKKWLVNRKIITSRESYVKPMNAESALFARDALAKTI YSKLFDWIVVKINMSLKTSGKTHKFIGVLDIYGFETFAINSFEQFCINYA NEKLQQQFNLHVFKLEQEEYLREGIEWKMIDFYDNQPCIDLIESKLGILD LLDEECRMPKGTDKSWVEKLYDKCKKWQHFTKNRLSQSAFIVQHFADNVE YESQGFLDKNRDTVMEEQVAVIKASSNTLLCELFSEKSLSSGQKTKITPN PTGTLKKNSKKTVGSQFRDSLNLLMDALNSTTPHYVRCIKPNDAKAAFQF DPRRGVQQLRACGVLETVRISAAGYPSRWTYYDFFVRYRVLCRSKDVKKN DFRTTCAKIVEKFIGDEDKYRFGKSKLFFRAGQVAYMEKLRSEKLMACGI MIQKHVKGWLARKKYIRLLTATRLLQRLSRGFIARRRIFHMRRLQAAVKI QAFIRGXLRRKSFNRTKELTIGLQARIRGYNARKNHIEFLKEKKAILIQK HVRGFLQRSKYLKNRNQVILVQSIVRRWSARRHYKKLKIEAKSVEHQKKL NQGLENKIISLQQKLTTSEKENKELHSALNGHTALKKDLEDYKKVSTEAK ALQQRNSSLEAQLDSLKQELDSEKTEKIDIINDRVNDSEAWLAKEKDYLL QISSQEEEIRIIKETSKMEGEANTSDIISKLQQEKLSMSQEYEQERIAYQ RLVNEYNKLEALYENVQDELNSSGRRTSLVSLTTNEGEDIDSSYGSQSGR SSMRSTHDQLHKSEGSDGDGGQGHVNNVGLTVKLQQKLQETIKERDRLSR RVEELEALQKSNDEIQSNQVLRIQDLEHENTSTLGELKVLRHGILNNNGD NAQLKEVLEQFDSLQEELNRRREECIQLRSLLAANEQPLSIVSKASDVLP DSDDLLAAFESQKKFIKQLQDQIYDEKSRSKEMKHEYEDEIKKLNLTTTE QQQIINETINGSPTNQIEACLQHEITRLTGENFDLREKIEDQTDTNRRLK GQLKTYVKRLRECGASISETNGIEPDINKELPLAMPVIRKKEHDYLGMFE YKKEHEQTIMKALIYDLKPKIASQMLPGLPAYVIFMMIRYTDHNNNDELV RNLIQGCICFIKKVIKKKGQNDIEIQTLWLANILRILHNLXQYSGERKFQ EDSSSKQIEQCLRNFDLTEYRRLISDIAIWVYQGVIKLIEEEIQPLIVPA ILENDSLGSIDQPRGPRFKPGSKTNERETPIDVEPKEALTQLIELLTRFQ KILAKYGLGPEIISMIFRQIFYTICAGSLNNLLLRKDICHWSRGMKIRFN IAQIEQWAXDYKVDDEKRQVIEALAPTRKTQEDAVNLCNMCDQLRVSQII KILNLYXPADEYEERVTPAFVRKIQSTLQERSNIESQKKFPLLMDTRFIY AVHFPFCPSNVRFEDLEIPDCYNDLNNYLTKI back to topmRNA from alignment at LSalAtl2s84:1272304..1281371- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011962-707809 ID=EMLSAT00000011962-707809|Name=EMLSAT00000011962|organism=Lepeophtheirus salmonis|type=mRNA|length=9068bp|location=Sequence derived from alignment at LSalAtl2s84:1272304..1281371- (Lepeophtheirus salmonis) ATGCCGAATGTAAATCTATACTCAAAGGTAAATATTCATCTCTTAAGTAT
TCTCTATCTACAACATTACATACGAAACTTCATTCAGACATAGCAAAAAA
GAAATTAAAAGACGAAACATTTGAAGAGTATGAAAATAATTCACGCAACC
TTTGGCCAGCAGTTTAAATGAGTCGAATTTTATGTACTTCGCCACTTTAC
ACATCACTGGTAGTGTTTGATCMCCACGACTGATTGCTTTATCAGTCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCCCTTC
AGTCTTTTTTTTTTATCGGCTCSKRCSSMKTTTMWGTCCTKGCAATCTTT
TTWTTTTRTTGACTCCTAGCTAGGATTCAAGAATATAGGAACTAAGAAAA
TACTTCATGATAACTACATCACCTACAGTATCTTGTCTCTTTGAAAGAGG
TTAGGAATAAAGATCTAACTTTAACTACTCAATTGACGTAGATAGTGATA
ACTACATCATTTTAGCTGCTGTAGTTTCTACAAAAGACCGATATAGACCA
GTCCTAGGACTAACTAATTTTATTAGGTTAGGACTCCAGTATTTTTTTAA
GACAAATCCATCACTAATCACTGGTAATCCGTTCTTAGATCAGAATGTCT
GGATTTGACTCCTTCATTCACCCACTCAAATGTAGTATTTATTAATAGAA
ATATAAGGATTTGATTTGACAAAAGAAATATTAAAGCGATGATTCATAAT
TGGCTCTTGCATGAATCACATTCCAACGGTTGCGCTAGTGTATAACCTAT
TGAATATATTATAGTCCACCCTTTCTTTTCGTTCAACTTAAATAAGCAAA
TATATTTAATATACCTTTGATGATGATATTGAGGCATATTTGACCTTTTA
ATCCACCTTGCTTTTATTTTCAACTTGCGAGATGCCCCTTATTCTATGCT
TGTACTAATTTGAGTTCAATATGATTTTACTTATAGGGAGCCCGCATTTG
GCTCAAGGATCCAGAGACTGTGTGGAAAGCAGCATCAGTGACACAAGACT
ACGATGGCAAAGTTCTTCACGTGGAAATCACGGATACCCTTGAGACGGAA
AGTATTAACATTTCCAAGGAGTCAGATTTACCTCCTCTACGAAATCCTGA
TATCCTCATTGGAGAGAATGATTTGACAAACCTTTCCTATCTGCACGAAC
CAGCTGTTCTACATAATTTAGCCATTCGTTTCATAGATAATTGCGCCATT
TATACATACTGTGGCATTGTACTTGTTGCAATTAACCCTTATAGTGATTT
ACAGATCTATGGAAATGATACTATATCTATGTATCGAGGGAAGAATATGG
GGGACTTGGATCCTCACATATATGCTGTGGCTGAGGAAGCCTTTACTCGA
ATGGAAAGGTGAGATGATCGTATTCCTTTTACTCATTGTATGTACACTCC
TGGTGTGGGTGCTGATATCCATTAAGTATTTATGCGTGAATGATGGCCGA
GTAAAAAAAATGTGTAATATATATAACCACAGAAAGTCATTGCAAATTTG
TTTGCTAGTGAAATGATGAAATTCGTGGTTGATATTAGTATGACTTCTAC
TACAATTTCAACGCATTAATATTTCACACATTTTATTAAATGAACTTTTT
TTTTCAAAATGAGTTAAAATATCTTTTTAAGTACAGCACATACGTATGCA
ATATATACCCCTTGAAAGAAGAAGTTTTTTTTTTCTTTCATATATTTAAT
ACAATTGTATTAAGTTTCATTTTTTATTTGGTACATTTTGTCTTAATCGG
TGTCAAAATACATCAAATCAGTTTTGACTTGAAGTCCTATTATTATCTTT
AATATTATGAAGAGTGGAAAAATAAGCTCTTCCGTATTTTCCCAAGTTTT
TCATATTTATGATACTGATCTTATTATTAATTAGGAAATATCTTATCTAG
TGATACAGTATGATAAAGGTATGACTCATGATTTATTTTCTTTTTATCTC
AATTTGCATGATTAGATATAACTATATAGTTGCATGTTTGTATGACATAG
TTTGCCTCCTTTATAACGTTCTTTAGACTGGAGCTAATTTAAATAATATT
GAATTCAGTCCTATATTCTAACTTTAAAGCATATTTCTTTTTCATTTTAC
TACTCTCATATTTAATATTCATTAATTCATGTGTTTAATCATCATATTAT
GTTTTCGGTTTTGGGTCATCCACCTATTCCTAGTAACATAATCTTTCCTT
TTTTTCAATACATACATGTTAAATTTATAGCTGATTTTACGTCATATATA
TGTTGTAGAGATATACTTTTGAGAAAGTGCGCAATTTTTCTGTCCCATAC
ATAATTAAGGCAAAAATATTTTTCCCCTTGGAGCTTTTTGATGTCATTTC
TCTTATACATTTGGGTTAATCGGCTTACTTTCTTTATTTGTGACTGAATG
ATTGATTGTTTCATAAATCTTTAGTACAAAACTATTATCTTTAATTATTA
TTATTCAGAATTTTAGTCATAGAAAAATGTAGGTTTAAAAGACTAAGTGT
CTTTGAAGCTTGTATTGTATACCTGAATTACTACTTCATTTGTRTTTCTT
AAAGATTAAGGCATACTCAACCCCCCCCCCCCCTATTACAAAGGATTTTT
TACATGAAGTCGTTTTTATTTTATATCAATTACCATTATATTATAGAGAT
TCATTAAATCAGTCAATCATTGTCTCCGGTGAGTCTGGAGCTGGAAAAAC
TGTAAGTGCCAAATATGCTATGCGTTACTTTGCGACTGTTGGAGGAACTT
CTCAAACAGAAACACAAGTGGAAAAGCGGGTCTTGGCTTCGTCTCCTATT
ATGGAAGCCATTGGAAATGCCAAAACGACACGTAATGATAATTCCTCTCG
GTTTGGTAAATACATCGAAATCGATTTTAATAAGCAGTTCCATATTATTG
CTGCTGATATGAGGACGTATTTATTAGAAAAGTCAAGGGTCGTGTTCCAA
GTAAATGATTTGCCTTTTATCACTTAAACAGCTTCATAGCATCAACATAA
CTTTTCAGGCTGAAGATGAAAGAAACTATCACATATTTTATCAAATGTGC
GCCGCTCGTGAAGATGAGTTTATGAGCTGTCTCTCCCTTGAGCACCCGGA
CGATTTTTTTTATCTCAATCAAGGTTCTTCTCCAGAAATAGATGGTGTTG
ATGATTTGAAAGAATTTATGAACACAAGAGAAGCTTTTCATTTGTTAGGC
ATTCCAGAAGAAGATCAATTTAGGATTTTTCAAATTCTTGCTGGAATTTT
ATATCTGGGGAATATTTCTGTAGAGCCTAGCTCTGGTCGTGCAGATTCAG
AATCATCTCAAATTACTTCCGATGAGAGTGTGATTAAAAANTGTCAGATT
TACTAGGAATAGAGGAACCTCAGATTAAAAAGTGGTTGGTGAATCGTAAA
ATCATTACTTCTCGAGAGTCCTACGTTAAGCCAATGAACGCTGAATCTGT
AAGTTAGAGCTGATTTATTTTTGTTAAGATTCACTTATTCTTTTCTTTTT
CTTTACAAGGCACTATTCGCAAGAGACGCTCTTGCAAAAACCATATACTC
AAAGTTGTTTGATTGGATCGTTGTCAAGATCAACATGTCATTAAAGACAA
GTGGAAAAACTCATAAATTTATCGGTGTGTTGGATATATATGGTTTCGAA
ACGTTTGCTATCAACAGTTTTGAACAATTTTGTATCAACTATGCGAATGA
GAAACTTCAACAACAATTTAATCTTGTAAGAAAAGTTATGTATTTTTTAT
GATAAACTTATTATTTAATTATTTTTATAGCATGTATTCAAATTAGAGCA
AGAGGAATATCTTAGAGAAGGAATTGAGTGGAAGATGATCGATTTTTACG
ATAATCAACCCTGTATTGACTTAATTGAAAGCAAATTAGGTATTTTAGAT
TTACTTGACGAGGAGTGCCGTATGCCTAAAGGGACCGATAAGTCCTGGGT
TGAAAAATTATATGACAAGTGTAAAAAATGGCAGCATTTTACTAAAAATA
GGCTGAGCCAATCTGCGTTCATCGTTCAACATTTTGCTGATAATGTCGAA
TATGAATCTCAGGGATTTCTGGATAAAAATCGAGATACAGTTATGGAGGA
ACAAGTTGCTGTCATAAAAGCAAGTTCAAATACATTGTTGTGTGAACTTT
TTTCAGAGAAGAGTTTGTCGTCAGGTCAGAAAACAAAAATAACTCCTAAT
CCGACCGGAACTTTAAAAAAGAATAGTAAAAAAACAGTTGGATCTCAATT
TAGAGATTCACTAAATCTACTTATGGATGCTCTTAATTCAACTACTCCTC
ATTATGTACGCTGTATTAAACCAAATGATGCAAAAGCAGCTTTTCAATTT
GATCCCCGTCGAGGTGTGCAACAACTAAGGGCTTGTGGAGTGCTGGAAAC
TGTTCGTATTAGTGCTGCAGGATATCCCTCCAGGTAATTGACTTTTTATG
AACTTGTATTAATTATATAAAATGACCCCTTTAAATTTTCAGATGGACGT
ACTATGATTTCTTCGTGAGGTATCGTGTTTTGTGCCGTTCGAAAGATGTA
AAAAAGAATGATTTTCGGACAACTTGTGCAAAAATTGTTGAAAAATTCAT
TGGAGATGAAGACAAGTATCGATTTGGTAAGAGTAAGTTGTTCTTTCGAG
CGGGTCAAGTAGCTTATATGGAAAAATTGAGGTCAGAAAAACTCATGGCA
TGCGGTATAATGATTCAAAAGCATGTTAAAGGCTGGCTGGCCCGTAAAAA
GTATATTCGTCTGTTGACAGCGACGAGGCTATTACAAAGACTTTCAAGAG
GCTTTATTGCTCGAAGAAGAATTTTCCATATGCGACGATTACAGGCTGCA
GTCAAGATTCAAGCATTTATTCGTGGCTGKCTAAGAAGAAAAAGTTTCAA
CCGAACAAAGGAACTAACTATTGGTTTACAAGCTCGCATCCGTGGTTATA
ACGCTCGCAAAAATCACATAGAATTTTTGAAGGAGAAAAAGGCAATTTTA
ATTCAAAAGCATGTTCGAGGTTTCCTTCAAAGAAGCAAATACCTTAAAAA
TAGGAATCAAGTCATATTAGTTCAATCAATAGTACGACGGTGGTCTGCTC
GACGCCACTATAAAAAACTTAAAATTGAAGCCAAGTCCGTTGAGCATCAA
AAGAAATTAAATCAAGGTCTTGAAAACAAAATTATTAGTCTTCAACAAAA
ACTCACAACTTCTGAAAAGGAAAATAAAGAGCTTCATTCAGCGTTAAATG
GGCATACTGCACTCAAAAAGGATCTAGAGGACTATAAAAAGGTGAGTACT
GAGGCCAAAGCACTTCAACAACGTAATTCCTCTTTAGAAGCTCAATTGGA
TTCATTAAAACAAGAACTTGATTCCGAGAAGACCGAAAAAATTGATATAA
TCAATGATAGAGTCAATGATTCCGAAGCATGGTTAGCCAAAGAAAAAGAC
TATCTTCTACAGATATCTTCACAAGAAGAAGAAATTCGTATAATCAAAGA
AACATCAAAGATGGAGGGCGAAGCAAATACCTCTGATATCATTTCCAAGC
TTCAGCAAGAGAAACTGTCAATGTCTCAAGAGTATGAGCAGGAAAGGATC
GCCTACCAAAGACTTGTTAATGAATATAACAAGTTGGAAGCCTTATATGA
AAATGTTCAAGACGAACTCAATTCCTCTGGACGAAGGACCTCTCTTGTGT
CTTTAACCACAAATGAAGGTGAAGACATCGACTCTAGCTATGGTTCCCAG
TCAGGTAGAAGTTCTATGAGGTCAACTCATGATCAGCTTCATAAAAGTGA
AGGATCCGATGGTGATGGTGGCCAGGGCCACGTCAACAATGTAGGTTTAA
CTGTCAAACTGCAACAGAAGCTTCAAGAAACTATTAAGGAGCGTGATCGA
CTTTCAAGAAGAGTTGAAGAGCTAGAAGCTCTGCAAAAATCAAATGATGA
AATTCAGTCAAATCAAGTTCTTAGGGTAACAGCTCTGTCCTATCATAATT
ATTCCGACAACTTTTTCATTATTTTCACCTTTTTTTTTAGATTCAAGATC
TGGAACATGAAAATACGAGTACCTTAGGTGAACTTAAAGTTCTTAGACAC
GGTATCTTAAACAACAATGGTGACAATGCTCAATTAAAAGAAGTCTTGGG
TAAGATATTTTACAATGTCTATCTCCTGGTTAAAATTTGGTTCTCTTAGT
TTATTTTGTACTAAACAGTTTTTAAATGTTTATATTGTTTTCACTTTTTT
TTAACTCATTATTTGTGATTTTAAGATTTGAGATGGCATTTTAATAATTA
AAATGTAAAATAAATTTTGTTATTGTGATCTTATAACAATTTAGTTTGTG
TATTCTTATTTGTAGTAATCAGCCATTTTTAATCTCTAAATATATCACAT
TTGCTTTCTTTATAAATTCATGATATTCCGACATTTGACTTATCATCCAT
CGGTATTTCATATAGGATTTTTAATTTTTGTATTCATTTTTCCGAACTTT
AATACTATTTTACTAATGTGATTATCGATTATTTATTTCTACTTAATTAT
GTTTTGTATTTTTACGGGTATTTAAGATATCCATATTTATATTTTTGTTC
AATCTTTTGCAATCTAAGATGGTTTTCTAGTGGTGCTGGTTATATACTAT
ATATACATTATGCTAATTATTTTGGAATATTCAAATGACTAAATATATCG
AATATTGTTTCCGATCCTTCATATTTATATGAACTTAAATTTTCAGAGCA
ATTTGATTCACTCCAAGAGGAATTGAACCGTCGTAGGGAGGAATGCATCC
AGCTTAGAAGCTTGCTTGCTGCTAATGAACAACCATTGTCCATAGTTTCA
AAAGCAAGTGACGTTCTGCCAGATTCTGATGATTTACTTGCAGCTTTCGA
AAGTCAGAAAAAATTCATAAAGCAGTTGCAAGTACGTTACTTCACGGATT
TAATCCTTTCATTTCTATGATTAAATCTAATTTTTTGTTTTTCTATCTCT
GCAGGATCAAATTTATGATGAGAAATCACGAAGCAAAGAAATGAAACACG
AATATGAAGACGAAATCAAGAAATTAAACTTGACGACCACAGAGCAACAG
CAAATCATTAACGAAACTATCAATGGAAGCCCAACGAACCAAATTGAAGC
CTGTCTGCAGCACGAAATCACACGCCTTACCGGTGAAAATTTCGATCTGA
GAGAGAAAATAGAAGATCAAACGGATACTAATCGGCGATTAAAGGGTCAA
TTAAAAACGTATGTCAAAAGACTGCGAGAGTGTGGTGCCTCCATTTCTGA
AACCAACGGCATTGAGCCTGACATCAACAAGGAGTTGCCTCTTGCTATGC
CCGTCATTAGAAAGAAAGAACATGATTATTTAGGAATGTTCGAGTACAAG
AAGGAACATGAACAGACGATCATGAAGGCCCTCATCTACGGTATGTCCCG
CCCATTCTTTTTTTTACTTAGTTGACTTGCATATTTTTACTTATAGATCT
CAAGCCAAAAATTGCATCTCAGATGCTTCCTGGATTACCAGCATATGTTA
TCTTCATGATGATCAGGTATACAGATCACAACAACAACGATGAATTGGTT
CGAAACCTCATTCAGGGTTGTATATGTTTCATTAAAAAAGTCATAAAGAA
AAAAGGTCAAAACGATATTGAGATCCAAACTCTTTGGCTCGCCAACATTC
TCMGGATCTTGCACAATCTGCMACAATACTCAGGAGAGAGGAAGTTCCAA
GAGGACAGTAGTTCTAAACAAATTGAGCAATGTCTTCGTAATTTTGATCT
AACTGAATATAGACGCCTTATTAGTGATATAGCTATTTGGGTTTACCAAG
TAAGTCATCATATCATGATCATAGTAGAGCATTTTCTCTGACAATCGTTT
AAAAATTATCAATCCTGCAATCAGTTGATATTTTGTATCAAATTTAGTGA
AAATTATGCATAGTATATTACTTCGTTATGGTATTCTTTTCTTTTTTTGA
ACCATAGACCATATATTTTTTTTAATTGTCTTAGGGTGTGATAAAACTAA
TTGAAGAGGAAATTCAACCACTAATTGTACCTGCCATTTTGGAGAACGAT
AGTCTGGGTTCTATTGATCAACCACGGGGTCCACGTTTCAAACCAGGAAG
TAAAACAAATGAACGTGAGACTCCGATAGATGTTGAGCCCAAGGAAGCTC
TCACTCAACTTATTGAACTCCTAACACGATTCCAGAAAATCTTAGCGAAA
TATGGATTAGGTCCTGAAATTATTTCCATGATTTTCAGACAAATCTTCTA
TACAATTTGTGCAGGAAGTTTAAATAATCTTCTTCTCCGAAAGGATATCT
GCCATTGGTCTCGAGGAATGAAAATACGTTTCAATATTGCTCAAATTGAA
CAATGGGCTSGAGACTATAAAGTAGATGACGAAAAACGCCAAGTAATTGA
AGCCTTAGCACCTGTGATTMAAGCCACTCAATTATTGCAGGTAATATTAG
AGGATGCAGTTCAAGACTCAGTTCAGCATATTATTTTTTAAAACCTTATT
TCAGACTCGCAAAACTCAAGAGGATGCAGTAAACCTATGTAATATGTGTG
ATCAACTTAGAGTTTCACAAATCATTAAAATTTTGAATTTGTACMCYCCT
GCCGATGAATACGAGGAGAGAGTCACTCCAGCATTTGTTAGAAAGATTCA
ATCAACGCTCCAAGAAAGATCGAACATAGAATCCCAGAAAAAGGTATTTA
TAACAGTGACAATTATAATTAATATCTAGGTCATTAATTCCAATATTTAT
TCAAATATATTAATGTGTATTCTCTATATTTTTTAGTTTCCTTTATTGAT
GGACACAAGATTCATATATGCTGTTCACTTTCCATTTTGCCCATCCAATG
TGCGATTTGAAGACCTCGAGATTCCTGATTGTTATAATGACCTCAATAAT
TATTTAACAAAAATCTAA back to top
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