EMLSAT00000011977, EMLSAT00000011977-707824 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011977
Unique NameEMLSAT00000011977-707824
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s852supercontigLSalAtl2s852:331080..333437 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011977 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011977EMLSAG00000011977-694743Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053629EMLSAE00000053629-762557Lepeophtheirus salmonisexon
EMLSAE00000053630EMLSAE00000053630-762558Lepeophtheirus salmonisexon
EMLSAE00000053631EMLSAE00000053631-762559Lepeophtheirus salmonisexon
EMLSAE00000053632EMLSAE00000053632-762560Lepeophtheirus salmonisexon
EMLSAE00000053633EMLSAE00000053633-762561Lepeophtheirus salmonisexon
EMLSAE00000053634EMLSAE00000053634-762562Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776470auto776470Lepeophtheirus salmonispolypeptide
EMLSAP00000011977EMLSAP00000011977Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011977

>EMLSAP00000011977 ID=EMLSAP00000011977|Name=EMLSAP00000011977|organism=Lepeophtheirus salmonis|type=polypeptide|length=612bp
MFTRYLLFLCITILIGDAHGFVPPKKCPATHPLSESECFGRTESNCWSVG
VRDLDCPESALCCFDGCANTCLLDSEAXPSALIEVPEVFXPYLPPPLPIL
IPEPLVDETCPNTFPKMHYDCIGQTEHTCWTVGTRDSDCPGHGLCCFDGC
ANTCLDKQELRNDPCNPSPCGPGTTCTTNKHNNPICKCLSGLVPKPDTIK
GCGPECITDADCKYNYNCENQRCKEKKDPCNPSPCGPGTTCKPNSLGNPV
CECKDGLIPKPDAITGCGPECTIDSDCKSGYECSFSKCRKIVDPCKPSPC
GPGTACTVNNKGNPVCQCLPGLIPKPDTIIGCGFECERDLECENGYVCSE
HRCIEKSDPCDPSPCGPGTECMENDRGYPVCRCLLGLIPKPDTITGCGPE
CTVDTDCEASHICKESRCMKRPNPCDPNPCGAGGLCDPVGHTGFRCSCPP
GYFGDADIQCIKKDCDIDEECSLDQFCNVGNFTCTNPCTMMQSCGDSQFC
RVVNHQPICGFNEVIQKPVQRSKPFVIGSRHNFISNLLPKTRSKSPLVIG
GAHKSPFKQPLSLSKMKVFVGVNEDDDDLGSHKGLQTATVRRRPVIGGKY
RRRKRLLKFKQN
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mRNA from alignment at LSalAtl2s852:331080..333437+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011977-707824 ID=EMLSAT00000011977-707824|Name=EMLSAT00000011977|organism=Lepeophtheirus salmonis|type=mRNA|length=2358bp|location=Sequence derived from alignment at LSalAtl2s852:331080..333437+ (Lepeophtheirus salmonis)
TATTTGGTTGAATCAGTCCATCTCCATCATTGATGTGAACAGGAACAAAA
AAACAATAAGGTGAATAATCCTCAATGTTCACGAGATATTTATTATTCCT
CTGCATCACCATCCTAATTGGTGATGCTCATGGGTTTGTCCCCCCTAAGA
AATGCCCAGCAACCCATCCCCTATCTGAATCCGAATGTTTTGGTAGAACA
GAGTCTAATTGTTGGTCTGTTGGAGTAAGAGATCTAGACTGTCCTGAAAG
TGCTCTATGCTGTTTTGATGGCTGTGCAAACACCTGTCTACTCGATTCAG
AGGCTARACCTTCTGCCCTGATAGAAGTTCCTGAAGTTTTTMCTCCATAT
CTCCCACCACCATTGCCGATCCTCATCCCCGAACCTTTAGTCGACGAAAC
GTGTCCAAATACTTTTCCTAAGATGCACTACGATTGTATTGGTCAAACTG
AGCATACATGCTGGACAGTTGGTACACGTGACAGTGATTGTCCTGGACAT
GGCTTATGTTGTTTTGATGGATGTGCCAATACCTGTCTGGATAAACAAGA
ACTACGCAATGATCCTTGTAATCCTTCACCATGTGGGCCAGGAACGACAT
GCACAACAAATAAACATAATAATCCCATATGTAAATGTCTTTCAGGCTTA
GTTCCTAAGCCAGATACAATTAAGGGCTGCGGTCCTGAGTGCATTACTGA
TGCCGACTGTAAGTATAACTATAACTGTGAGAATCAAAGATGCAAAGAGA
AAAAGGATCCTTGCAACCCAAGTCCTTGTGGTCCAGGAACAACATGTAAG
CCCAATAGTCTTGGAAATCCTGTTTGTGAATGCAAGGATGGATTAATTCC
TAAGCCTGATGCAATTACTGGATGTGGTCCAGAATGTACAATTGATTCAG
ATTGTAAATCAGGATATGAATGCTCCTTTTCTAAATGTAGAAAAATTGTC
GATCCTTGTAAACCATCTCCATGCGGCCCTGGAACAGCCTGTACAGTTAA
CAATAAGGGCAACCCTGTTTGTCAATGTTTACCTGGACTTATTCCTAAGC
CTGACACTATAATCGGCTGTGGATTTGAGTGTGAGCGAGATTTGGAATGC
GAAAATGGTTATGTTTGCTCTGAACATAGATGTATTGAGAAAAGTGATCC
CTGCGATCCTTCCCCTTGTGGACCTGGAACAGAATGTATGGAAAATGATA
GAGGGTATCCGGTTTGTAGGTGAGAAATATATATATATTTATTCATTTTA
AAATAAACATTAATTATCAAAATGTAATGTCAAATATCAATTACAGATGC
CTCCTTGGACTTATACCTAAGCCTGATACAATCACTGGATGTGGGCCAGA
GTGTACRGTTCGTATCACGAGCCATATTTAAGCATACTTAATATTTTAAT
ACTCATTTTTTTAAATCATTTCTAGGTAGACACGGATTGTGAGGCAAGCC
ATATCTGTAAAGAATCTAGATGTATGAAACGACCAAATCCTTGTGATCCA
AATCCCTGTGGTGCAGGAGGCTTGTGTGATCCAGTCGGACACACAGGATT
TCGATGTTCTTGTCCTCCTGGATATTTTGGAGATGCAGATATTCAGTGTA
TAAAAGTAAGTTTAAAAAAAAAGTTTTGAAATTGTAGTCATTACAACATT
TTCATATTGAACTGAACAGAAAGACTGTGATATTGATGAAGAGTGTTCAT
TGGATCAGTTTTGTAATGTGGGAAATTTCACATGTACTAATCCTTGTACA
ATGATGCAAAGTTGTGGAGATTCTCAATTTTGTAGAGTCGTTAATCATCA
ACCAATTTGTGGTTTTAACGAAGTTATTCAAAAACCCGTTCAGAGATCAA
AAGTAAAGTCGTAAATACTTTTTAAAAAATGTATAATTTAAAATAATATT
TTCATAGCCATTCGTGATCGGAAGTAGACATAACTTTATCTCCAATCTTT
TACCTAAAACACGATCAAAATCTCCTTTAGTTATAGGCGGTGCCCATAAA
AGTCCATTCAAACAACCTCTTTCACTTTCAAAAATGAAAGTGTTTGTCGG
AGTGTAAGTAAAGATGGTTTCAAAAGTCAACATGTAAATTAAATTATGAC
TTTCTTATAGAAACGAAGATGATGATGATCTTGGCTCACATAAAGGATTA
CAAACAGCTACCGTTCGCAGAAGACCCGTGATTGGTGGAAAATATAGGCG
TCGTAAAAGGCTATTAAAATTTAAACAAAATTAGTTTCCTTGTTTTGGAA
AAAATAATATAAAATATTGTATAGCTTTGTATAGAAAAATTGGGTCAGTG
TCGGGATTTTAAATTCCTGTAAATCAAGAATTTCAAATATAGTTACAAAA
AATAGAGT
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