EMLSAT00000011985, EMLSAT00000011985-707832 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011985
Unique NameEMLSAT00000011985-707832
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s853supercontigLSalAtl2s853:228352..229792 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011985 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011985EMLSAG00000011985-694751Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053670EMLSAE00000053670-762598Lepeophtheirus salmonisexon
EMLSAE00000053671EMLSAE00000053671-762599Lepeophtheirus salmonisexon
EMLSAE00000053672EMLSAE00000053672-762600Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774895auto774895Lepeophtheirus salmonispolypeptide
EMLSAP00000011985EMLSAP00000011985Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011985

>EMLSAP00000011985 ID=EMLSAP00000011985|Name=EMLSAP00000011985|organism=Lepeophtheirus salmonis|type=polypeptide|length=350bp
MATTMKLICLFALIGCVMGGRNLRPIRGQRSLLNTFPFNSGERGTAASED
HEHVHEHLAHEEHGHAHDESQEFEASENRLARQGGDDXPLDIGSIAAAGE
RCIDKVVVVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEKCEENFKK
SCFIEYKKVAIDETIKFCHTPFICEGEGPEECKTVYESECTTRYHEHDVE
DDVVNCETIQEEKCEDVTQGYTTEQKCTKWPRQVCTSEKKNVLKYSPQTE
CKKVPRELCGPSGCVLQPGPEECFDKKETIVQEVPEENCNLEPQKSCKQV
TKLVPSLKPVEECVDVPKEVCSRSRKNPRKVQKPVVKKWCYVPSAASGLA
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mRNA from alignment at LSalAtl2s853:228352..229792+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011985-707832 ID=EMLSAT00000011985-707832|Name=EMLSAT00000011985|organism=Lepeophtheirus salmonis|type=mRNA|length=1441bp|location=Sequence derived from alignment at LSalAtl2s853:228352..229792+ (Lepeophtheirus salmonis)
GGTTGAACCATTAACAGTGTGATTGAGTCCTTCACAGGTTAATACAACAT
TTATTCGGAATAATCAATGGCTACTACAATGAAGGTGATTTTCTTATTTA
AAGTGTGACAAGAAGTTTTTGATCTTATAAATACTCTTTTATTTCTTAGT
TAATTTGTCTCTTTGCTTTAATCGGATGTGTCATGGGAGGACGGAATTTA
AGGCCCATTCGTGGACAAAGGTCTCTTTTAAACACCTTTCCATTTAACAG
CGGGGAAAGAGGTACTGCTGCTAGTGAGGATCACGAACATGTTCATGAAC
ACCTTGCTCATGAAGAACACGGCCATGCCCATGACGAATCTCAAGAATTT
GAAGCTTCAGAGAATAGATTAGCTAGACAAGGTGGKGATGACGYCCCCCT
TGATATTGGATCCATTGCCGCTGCTGGAGAACGTTGCATTGACAAGGTAG
TCGTAGTAGAAGAGACGGAATACGATGATCATATCGAATGCCACCACAGC
TACTCCGAGAGATGTCACACTACCTATACCACCGACTTTGAACCTCAACA
AGAGGAAAAGTGTGAAGAAAACTTCAAGAAGAGTTGTTTCATCGAATACA
AGAAGGTCGCCATTGATGAAACTATTAAGTATATTCATGTTACATTTTAT
AAAATGGAGTTCAATACTCATTCTATATTTGTCATGTTCCTCTAGATTCT
GTCACACTCCATTTATCTGCGAAGGAGAAGGACCTGAAGAATGCAAGACT
GTCTACGAATCCGAATGTACTACCCGCTATCACGAACACGATGTGGAGGA
TGACGTTGTCAACTGTGAGACCATCCAAGAAGAGAAGTGCGAGGACGTCA
CCCAAGGTTACACCACCGAGCAAAAATGTACCAAATGGCCTAGACAAGTC
TGTACCTCTGAAAAGAAGAATGTCTTGAAATACAGTCCCCAAACCGAATG
TAAGAAGGTTCCTAGAGAATTATGCGGTCCTTCCGGCTGTGTTCTCCAAC
CTGGACCCGAAGAGTGTTTTGATAAGAAAGAAACCATCGTCCAAGAAGTC
CCAGAGGAAAACTGTAATTTGGAACCCCAAAAGTCTTGCAAACAAGTCAC
CAAATTGGTTCCCAGCCTTAAACCCGTTGAAGAGTGCGTTGATGTACCTA
AAGAAGTATGTTCCCGTTCCAGAAAGAACCCCAGAAAGGTCCAAAAGCCC
GTTGTCAAGAAATGGTGCTATGTTCCTTCTGCTGCTTCTGGTTTGGCATA
AAGTATGATCCTTTAAATTTATTTTAATTCATAGCAACACGACCCTTTTC
TCCATTGATCGGACTGTCCATTTGTGCTCATTATTTATCCTTTTCTTCTT
TAATTTTTGCTTTCTCAAATTGTTATTAATCCTAAAGTTCTGTTGTTGTT
TTTTTACAATATTAAAAGTTGCATTTTCAAACGTTTTGAAA
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