EMLSAT00000011988, EMLSAT00000011988-707835 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011988
Unique NameEMLSAT00000011988-707835
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s853supercontigLSalAtl2s853:284743..286700 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011988 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011988EMLSAG00000011988-694754Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053680EMLSAE00000053680-762608Lepeophtheirus salmonisexon
EMLSAE00000053681EMLSAE00000053681-762609Lepeophtheirus salmonisexon
EMLSAE00000053682EMLSAE00000053682-762610Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775829auto775829Lepeophtheirus salmonispolypeptide
EMLSAP00000011988EMLSAP00000011988Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011988

>EMLSAP00000011988 ID=EMLSAP00000011988|Name=EMLSAP00000011988|organism=Lepeophtheirus salmonis|type=polypeptide|length=321bp
MASQFKYICLIALIGSTAAAGGPRARTLTVNRAGKSLLNTFPFNDGARGT
ARAAHHEHAHAEHNHXHAEXQXASDNRLARQGGGDDVPLDIGSIAAAGER
CIDKVVMVEETEYDDHIECHHSYSERCHTTYTTDFEPQQEEECEENFKKS
CFIEYKKVAVDETVKFCHTPLVCEGDGPEECKTVYESECETRYHEHDVED
DVVNCETIQEEKCEDVTQGYTTEQKCTKWPKQVCTNEKKNVKKYSPITEC
KKVPRQLCGPSGCVPQPGPEECFDKKETIVQEVPEENCNLEPQKACKQVT
KLVPSLKPVEECINEDKKRLL
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mRNA from alignment at LSalAtl2s853:284743..286700-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011988-707835 ID=EMLSAT00000011988-707835|Name=EMLSAT00000011988|organism=Lepeophtheirus salmonis|type=mRNA|length=1958bp|location=Sequence derived from alignment at LSalAtl2s853:284743..286700- (Lepeophtheirus salmonis)
ATGGCATCCCAATTCAAGGTGATTATCATCAATCAAAGAAGTGACAATCA TTTTTACGTTTTATTCATATTTTATATTTCAGTACATTTGCTTAATCGCT TTAATCGGCTCCACCGCCGCTGCTGGAGGCCCAAGAGCAAGAACTCTTAC AGTCAACCGTGCAGGAAAGTCTCTTCTCAATACTTTCCCCTTCAATGATG GAGCCCGTGGAACTGCCCGTGCTGCTCATCATGAACATGCCCATGCTGAA CACAATCATSCTCACGCTGAACKCCAASCTGCCTCTGACAACCGATTGGC CCGTCAAGGAGGTGGTGATGATGTCCCACTTGACATTGGATCCATTGCTG CTGCTGGAGAGCGTTGTATCGATAAGGTCGTCATGGTCGAAGAAACCGAA TACGATGATCACATCGAATGTCACCACAGCTACTCCGAAAGATGTCACAC CACCTACACCACCGACTTCGAACCTCAACAAGAGGAAGAGTGTGAAGAAA ACTTCAAGAAGAGTTGTTTCATCGAATACAAGAAGGTCGCTGTTGATGAG ACCGTCAAATTCTGCCACACTCCCTTAGTCTGTGAAGGTGATGGACCCGA AGAATGTAAAACTGTCTACGAATCCGAGTGTGAAACTCGTTATCATGAAC ATGATGTTGAAGATGACGTTGTCAACTGTGAGACCATCCAAGAAGAGAAG TGTGAGGATGTCACCCAAGGTTACACCACCGAGCAAAAATGTACCAAATG GCCCAAACAAGTCTGTACAAATGAAAAGAAGAACGTCAAGAAATACAGTC CCATAACTGAATGTAAGAAGGTCCCCAGACAATTGTGTGGTCCCTCCGGC TGTGTTCCCCAACCAGGGCCCGAAGAGTGTTTCGATAAGAAAGAAACCAT CGTTCAAGAAGTCCCAGAGGAGAACTGTAACTTGGAACCCCAAAAGGCTT GCAAACAAGTCACCAAATTGGTTCCCAGCCTCAAACCTGTTGAAGAGTGC GTTGATATACCCNAAAGAAGTCTGCTCCCGTTCCAGAAAGAACCCCAGAA AGGTCCAAAAGCCCGTTGTCAAGAAATGGTGCTACGTTCCATCTGCTGCT TCTGGTTTGGCTGSTTWATTTTRTTCAGAGATTACTCCAACAAAAAGATC AAAACTTGGCATTATCATCACTAGTCAAATTCAAACTGCCACACTGATGT CATTTTTCTTTTGTTTTATCCTTATTATAAAATGTAAGATGAATGTCTCC AAATAAATCAAAATTTCTTAAATTCGCATTTTTCGTTTCTAATTGAGTTA TTTACATAATACAAACTGTTGTTTATTACATAGTTTTCTAAAGTAAAGTA TTATCAATAATGAAATATTAAAAAGAAATTAATTACACTTCCTAATTATG TTCAAAAATAGGATACAAAATCTTGTTATAGATTATATTATGTGACCAAA ACTTCATATACATATGTGTCCCTTCGCCCCAAAGGCAAGCTTGAATGACC TAAAATTGAGTATGGATTACATTTGTATTCATCCACGAATTATCGTCTAT TTCTAACAATAAATCATTTGTAATATCGTATCGTTATTTGTATCGTCTGG AATCGTACAAAATCAATGATAACAAATTGAATTATTTTATTTGAAAGGCC TAAATAAGAATCTAAAATCTAATAATTTCTTGAACCTCATCCAGTCAATT AAATATAAAGAGTTTAAATGACTCAAATATCTCCATAAAATATTGGGTAA AACAAAGAGAAATCAAAACAGCTGATTCAAAACACATATTGGAAACAATT ATCTGAAAATATAAAAACCCTCTTATAAAACCTTCTTTTATTTTTTGTAT TGGCCTTTTTTTGCATGCATTTAAACATTTAAAATCTAATTATAATATAG TTGAAAATTATTTTGTTAAAACATGTAGATAAATGAAGATAAAAAAAGAC TATTATAA
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