EMLSAT00000011992, EMLSAT00000011992-707839 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011992
Unique NameEMLSAT00000011992-707839
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s854supercontigLSalAtl2s854:249810..252054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011992 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011992EMLSAG00000011992-694758Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053703EMLSAE00000053703-762631Lepeophtheirus salmonisexon
EMLSAE00000053704EMLSAE00000053704-762632Lepeophtheirus salmonisexon
EMLSAE00000053705EMLSAE00000053705-762633Lepeophtheirus salmonisexon
EMLSAE00000053706EMLSAE00000053706-762634Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775280auto775280Lepeophtheirus salmonispolypeptide
EMLSAP00000011992EMLSAP00000011992Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011992

>EMLSAP00000011992 ID=EMLSAP00000011992|Name=EMLSAP00000011992|organism=Lepeophtheirus salmonis|type=polypeptide|length=172bp
MECKNFFKRSIVGIQEKPYFCKFSNDCDISVFDPDGIKRNRLRCQACRXQ
ACLDAGMFHSGSLQSRVGRPRKSSRVEPEYLLEDYEDSPTPAVDTTEFEC
RDLQYEVDLLRSKNRELTQSLKEKETQLSISEKQISNLKTQIQRLNDKRL
NDNVAPSSSSPXYFQWSLWQLV
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mRNA from alignment at LSalAtl2s854:249810..252054+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011992-707839 ID=EMLSAT00000011992-707839|Name=EMLSAT00000011992|organism=Lepeophtheirus salmonis|type=mRNA|length=2245bp|location=Sequence derived from alignment at LSalAtl2s854:249810..252054+ (Lepeophtheirus salmonis)
ATGGAGTAATTCTTTTTTGGGTTGCGATGAATTTTATGTAAAGTATTTGA ATATCATCCCTATATAAAATGTTGTATTTGAAAATAGCTATCTGGCGTGT ACAACCACTATTCCTCTTAAGAGGAGGCTATATTTATATTTCTAGTCGCA GTCCGAGCTAGAGTTCATAACCAAGCATCAGGAAAGAAAAAGTAGTTAAG TATATTATTTTATTAGGGTAAGTGTATGCTAGTAGTATGCATGTGCGTAA TGTGTTGTACTTGCGTTGCTTGTATACAAATATATGTAATCGACAGCAGT GAGTAGGTACGTATGTATGTAGTAAAATAATTGAAGAATAGTAGTAGATG AAACAAGTGTCACGTGACAGAAACAGCCAGGACCGGGGATTCCTTCTCTC TCTTCTTCTATTAAGTACACTACACACTACTAGTACTCACTATTGACTGT TGACTACTCTAGTAGTATTGAATTTATTTAGCTTCTCTGAGTTTTGCATT TGGATAGGATGTAAAGCGGGGCCCATCATTGGCATTATCAGATAAAGTAA GGACTTATTGAAGCAATGGAGGAGGAAGAGGGGACCTCTGAGGAGAGCAG GAAGAAGAATCGGCGTAAGAGAAAGMCTCCTCTCAAGGTGGAAACGMCGC CTTCCACAAGTTCAAGCTGGAAAGGGGAAATGGAGGAGGATGCCTTTGTG GAGACGAGMCTCAGCAATYCCCYCCCTCGCAAYCMCYGCCCCGTCTGTGG AGATSGAGCCAATGGACTTCATTACGGAATCTACACTTGCGAAGGGTTCG TGGGCCTCAAGCCCTAACTCCGCTCACACTCTTCATTTCTGCTTCACTCT TTTTCTAGGTGCAAGAATTTCTTCAAGCGCTCCATTGTGGGCATCCAGGA GAAGCCTTACTTTTGCAAATTCAGTAATGATTGTGACATCAGCGTCTTCG ATCCCGATGGCATCAAACGCAATCGGTTACGATGCCAAGCCTGTCGGKAT CAGGCATGCCTGGATGCAGGTATGTTTCATAGTGGTTCTCTTCAGTCTCG TGTAGGACGCCCTCGGAAATCCTCGAGAGTTGAGCCTGAATACTTATTGG AGGACTATGAAGACTCTCCTACCCCTGCTGTGGACACGACTGAATTTGAA TGCAGAGATCTTCAATATGAGGTGGACTTGCTTCGAAGTAAAAACAGAGA GTTGACGCAGTCTCTCAAAGAAAAAGAAACGCAATTGTCCATTTCGGAAA AACAGATCTCCAATTTAAAAACACAAATTCAACGATTGAATGATAAAAGA CTGAACGATAATGTTGCCCCATCATCATCTTCTCCTNCCTACTTCCAATG GTCGCTCTGGCAGCTTGTTTAAGGATGGTAACGTTACTATTACTCCTATT ATGCCTGGAAAATCCTCCTTGAAATTATCCAATTTAGATATCAAAGAAGA AGTAGAAGAAGAAGACATGGCCACCATAGAGGCCGTAAGCAACAATTTGG AAGCACAACCCGCGACAACTATTAAGAAATGGAAAATAAATAGCTACAAC ATTCTGGATAACAATTAATTGATCTTCTTCTTCCTATGGTATTCTCATCA TTGATGTACACTTTTTTATTATTATTAATAATTATCTCAAGATTGTTTAT TATATTTTTATATTTTATATTTTTTTGATTTTTTTAAATCCTTTGATAAT GGAGGACAGACTGTTACAATATTTGCTGTTTCCACATATTTTTTACAATA GTGGCCGTATGTTGTATTATTTTTGTTTTGTTGTATTATATTAGTAGCAT GGATTGTACTCCTTTGAGTCGTGCAATTAACTCAGTCTAACATTTATGTA GTGTGTGAGTTTGTACAGTTTCTAAATTTTTGAAAAGATGGCTTTCGTAC TTTAATAAAAATAATTGCAATCTTTTTAAAGGTTAGTCTGAAACATACAT ACTTATAAAAAAGTAAGAAACCCCGTCCAGTTTGATGGGAATACCGAATA TCTGACTGTTACGAAATTTTGAACTGCACATTTGGTTTTACTCTTTTTGC ATCTTATTTCTTGACATTTCAGCCTTGACCTATTATTATAATTATTATTT AAAAAAAATAATTCATTAATATTATGCCTACTTATGTATGTATTAAATAG TATTCAGTGTATCTATGTGTGTGATTAATTGTACAAAATGTTAAAAAATC AATTAAAGTGTGATGTTAAGGTTGTTATTTACATTCTTGTGCGAT
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