EMLSAT00000012017, EMLSAT00000012017-707864 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012017
Unique NameEMLSAT00000012017-707864
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s856supercontigLSalAtl2s856:144245..145062 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012017 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012017EMLSAG00000012017-694783Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053807EMLSAE00000053807-762735Lepeophtheirus salmonisexon
EMLSAE00000053808EMLSAE00000053808-762736Lepeophtheirus salmonisexon
EMLSAE00000053809EMLSAE00000053809-762737Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773206auto773206Lepeophtheirus salmonispolypeptide
EMLSAP00000012017EMLSAP00000012017Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012017

>EMLSAP00000012017 ID=EMLSAP00000012017|Name=EMLSAP00000012017|organism=Lepeophtheirus salmonis|type=polypeptide|length=161bp
MTNPKGYRRGTRDMFARDYKKKGVEHLSTYLRCYKNGDIVDIKGNGAFQK
GMPHKSYHGKTGRVFNVSKHAVGVVVNKRVKGRILAKRISVRIEHVNHSK
CRADFLRRVKANEALKTAAKQEGKPVPNTKREAKQPIPGHFVSARDNEPQ
FLAPIPYEFVA
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mRNA from alignment at LSalAtl2s856:144245..145062+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012017-707864 ID=EMLSAT00000012017-707864|Name=EMLSAT00000012017|organism=Lepeophtheirus salmonis|type=mRNA|length=818bp|location=Sequence derived from alignment at LSalAtl2s856:144245..145062+ (Lepeophtheirus salmonis)
TGAAAACGCTCTAAACGTAATAGGAGTTAAGAAGGGTTGGGAGAGTTGAA
AAAGTTGAAGTTAGTTAAGGTATAGTTTATGGATATAAAATTTCTTCTCT
TTCTACATCTGCTTCCTTTTCCGATTTAAGTCCGAGTGGGTAAGTCCTTA
GTTTTATATTTTGACTTTATTTTTTCCTAATTATTGTCTGATTTGTTGCT
AATTACAGGAGTAATATCTGATTCAAAATGACGAATCCCAAGGGTTACAG
ACGCGGTACTCGGGACATGTTTGCCCGGGACTATAAGAAGAAGGGTGTAG
AACATCTTTCTACTTATCTCCGGTGCTACAAGAATGGGGACATCGTTGAT
ATTAAGGGCAATGGTGCCTTCCAGAAGGGTATGCCCCACAAATCCTATCA
TGGAAAGACGGGACGTGTTTTTAATGTAAGCAAACACGCTGTTGGTGTTG
TTGTGAACAAGCGTGTGAAGGGACGTATTCTTGCTAAACGYATCTCCGTT
CGTATTGAGCACGTTAACCACTCCAAGTGCCGGGCCGATTTCTTAAGACG
TGTCAAGGCTAACGAGGCCCTTAAAACTGCCGCCAAGCAGGAAGGAAAGC
CTGTTCCTAATACAAAGAGAGAGGTAAGTTGTCTGAATCACTTAGTACAC
CTCTGTAATATCGCATTGCTGTCTTTTCTTTGCAGGCTAAGCAGCCCATT
CCTGGTCACTTCGTTTCAGCCAGGGACAACGAACCTCAATTTTTGGCTCC
CATTCCTTATGAATTTGTTGCTTAACTTAATCTTTGACACCAATACATAC
TTTAAATCAAACCCTACT
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