EMLSAT00000012037, EMLSAT00000012037-707884 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012037
Unique NameEMLSAT00000012037-707884
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s858supercontigLSalAtl2s858:297707..299333 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012037 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012037EMLSAG00000012037-694803Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053885EMLSAE00000053885-762813Lepeophtheirus salmonisexon
EMLSAE00000053886EMLSAE00000053886-762814Lepeophtheirus salmonisexon
EMLSAE00000053887EMLSAE00000053887-762815Lepeophtheirus salmonisexon
EMLSAE00000053888EMLSAE00000053888-762816Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776029auto776029Lepeophtheirus salmonispolypeptide
EMLSAP00000012037EMLSAP00000012037Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012037

>EMLSAP00000012037 ID=EMLSAP00000012037|Name=EMLSAP00000012037|organism=Lepeophtheirus salmonis|type=polypeptide|length=372bp
LTFGQALSRTWTFGSVVSAISTDEWKPIFHKLDKESXGXPNGKIPMTKFK
ELLDEDPLWKEGVPSSVQERILQEVDRNKDGVIDFDEFIELVKGTKLGLS
AKRRRAFRELLKETVDFLVPYKYSYQNQYSCSPPPFFMITISLLQVLIFI
YGDSGIPESDGVPYCSSLIYNPYKRSQVWRYLTYMLVHSGLFHLSFNLMV
QLILGIPLEMVHGWWRVMSVYVFGVLAGSLWTSVFRPNVFLSGASGGVYS
LITAHLGTVIMNYREMAYPLFRFSIVLLITLTDIFVYIYDAYVIGQTKPI
SYPAHIFGAITGLLVGITVLKNLQWQKYEKIIWFVSGIAFLGLMLSAIAW
NIYYYDDMNIIPDSLCKDRSVL
back to top

mRNA from alignment at LSalAtl2s858:297707..299333-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012037-707884 ID=EMLSAT00000012037-707884|Name=EMLSAT00000012037|organism=Lepeophtheirus salmonis|type=mRNA|length=1627bp|location=Sequence derived from alignment at LSalAtl2s858:297707..299333- (Lepeophtheirus salmonis)
CTTACCTTTGGGCAGGCTCTGAGTCGGACATGGACTTTTGGATCCGTTGT CTCGGCTATTTCTACTGATGAATGGAAGCCCATTTTTCATAAGTTAGATA AAGAGTCGGRTGGGRTTCCTAATGGAAAAATACCAATGACAAAGGTAAGT TAAGAATTGTTTCTAGTTTTAAGTATTAATATTATCACGTGGCCTTGGAA CTCTTTTTTTTTTAAATGTATATGTACCTTCAAAAACAGAACATAAAATA CAACTATTTATGAACAGTAGTATGGGGAAATGCAGTTTCATTACTTTCCA TTATGATTATACATTCTTTCATCATACTCTCAAACATGGAAATTGCTCCC TCAGTCAATTCCACGTTTAGGGCCGAACTACCTATGTACTCTGTCTATCC AAGGTACATGTCTGAATAATATTTGATGATAAATTTACATACTGAAATTG TATAAAAAGTAAATATGGTATTCAAATTATTTTTTTCAGTTTAAAGAATT ACTGGACGAGGATCCCCTTTGGAAAGAAGGAGTTCCTAGCTCTGTGCAGG AAAGGATCCTTCAAGAAGTGGATCGTAATAAAGACGGTGTTATAGACTTT GATGAGTTCATAGAACTTGTTAAAGGAACCAAATTAGGTCTTAGTGCCAA GAGACGACGAGCCTTTCGTGAACTTTTAAAAGAAACGGTCGATTTTTTAG TTCCTTACAAATACTCGTATCAGAATCAATACTCCTGTTCCCCGCCTCCT TTTTTCATGATTACGATATCCCTTCTTCAAGTACTCATATTCATCTATGG AGATTCTGGAATCCCGGAGAGTGATGGAGTTCCCTACTGTTCTAGCCTAA TTTACAATCCTTATAAACGTAGTCAAGTGTGGAGATATTTAACATATATG CTCGTTCATTCTGGACTTTTTCATCTATCTTTTAATCTCATGGTTCAACT AATTCTGGGGATCCCACTGGAAATGGTTCATGGTTAGTTCAATATTCAAT ACAATATTAATATGTCTATGTCCCTAAAGCCAAGAAAAATAATTTTAATT ACTCATATTCCAGGATGGTGGCGTGTGATGTCAGTTTATGTATTTGGAGT ACTTGCCGGATCTCTTTGGACAAGTGTATTCCGACCCAACGTTTTTTTAT CAGGGGCAAGTGGTGGCGTCTATTCTCTCATTACTGCTCATTTAGGGACT GTCATAATGAATTATAGGTACGTATAAATTTTTTATTGAATATTTAATTT TACAGAAATATTTATAATTTATGATGTTTTAAATTTTTTTTTTTTACAGA GAAATGGCTTATCCTTTATTCCGATTCTCCATAGTCTTACTCATCACTCT CACAGATATATTCGTTTATATCTATGATGCATATGTCATCGGACAGACTA AGCCTATAAGCTATCCTGCGCACATATTTGGAGCCATCACTGGCCTCTTA GTCGGTATAACCGTCCTTAAAAATCTACAGTGGCAAAAATACGAAAAAAT CATTTGGTTTGTGAGTGGGATCGCATTTTTAGGACTTATGTTGAGTGCTA TAGCATGGAACATTTACTACTACGATGATATGAATATCATTCCGGATTCT CTCTGCAAAGACAGAAGTGTTTTATAG
back to top
Add to Basket