EMLSAT00000012068, EMLSAT00000012068-707915 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012068
Unique NameEMLSAT00000012068-707915
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s861supercontigLSalAtl2s861:290797..291915 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012068 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012068EMLSAG00000012068-694834Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053993EMLSAE00000053993-762921Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775944auto775944Lepeophtheirus salmonispolypeptide
EMLSAP00000012068EMLSAP00000012068Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012068

>EMLSAP00000012068 ID=EMLSAP00000012068|Name=EMLSAP00000012068|organism=Lepeophtheirus salmonis|type=polypeptide|length=372bp
MFLPLNQSSWLSSILLVFISSLNFGKGLCPMDCYCDESDLSVTCESPSNL
QVVPISLNPDVLELNISGTPIKQLDAAFQFYGELRRLDLSFNKISTLEDR
CFENQVKLVRLDLAYNSLSSLQSSKVFYPLPELEYLNLEGNQIVNISIGV
LGYLQKLKYLNLKANRIMVLPLKTFDGIIASLREINLSFNFIRALELNDL
MGLGTLDLSSNPLHSFDGLPLNLRELFLANTNNISSSSLNSMFASLRDLR
YLDISSNLFQKGELKDLYSDSLFKLVLRNNSNLFHMDIDASLSQMIRLRS
LEIRHQPNLEKVTIDLRHFGKLRYLDISDNHKLSSIDFSNRRPTPSQKEX
RRDNLLPTSSVGQSSSRTSSCE
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mRNA from alignment at LSalAtl2s861:290797..291915-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012068-707915 ID=EMLSAT00000012068-707915|Name=EMLSAT00000012068|organism=Lepeophtheirus salmonis|type=mRNA|length=1119bp|location=Sequence derived from alignment at LSalAtl2s861:290797..291915- (Lepeophtheirus salmonis)
ATGTTTTTACCCTTGAACCAATCCTCTTGGCTCTCCTCSATTCTTCTCGT CTTCATTAGTAGCCTCAACTTTGGAAAGGGACTCTGCCCCATGGATTGTT ATTGCGATGAGTCAGACTTATCCGTTACATGTGAGTCTCCATCAAACCTT CAAGTCGTTCCCATTAGTCTGAATCCAGATGTTTTAGAACTCAACATATC TGGAACGCCGATTAAACAACTGGATGCGGCTTTTCAGTTCTATGGTGAAC TTAGAAGGCTAGATTTGAGCTTTAATAAGATATCAACACTTGAGGACCGT TGCTTTGAGAATCAAGTTAAGTTAGTACGACTGGACTTGGCTTATAATTC CCTGAGCTCTCTACAAAGTTCCAAGGTATTTTATCCTCTACCAGAGTTGG AGTACTTAAACTTGGAAGGGAATCAGATCGTAAATATCAGCATTGGTGTC TTGGGATATTTGCAGAAACTCAAATATTTGAACTTAAAGGCCAATCGTAT CATGGTTCTTCCGCTTAAAACATTTGATGGAATAATTGCCTCACTAAGGG AGATCAATTTATCATTTAATTTCATACGGGCCTTGGAGTTGAATGATCTG ATGGGCCTTGGAACTCTGGATCTCTCTTCAAATCCTCTTCATTCCTTTGA TGGACTTCCTCTCAACTTGAGGGAATTGTTCCTCGCAAATACCAATAACA TTTCCAGCTCTTCACTCAATTCCATGTTTGCCAGTTTACGAGATCTCAGA TACTTGGACATTTCATCAAATCTTTTTCAAAAAGGAGAACTTAAGGATCT GTACTCCGACTCGCTTTTTAAGCTTGTGCTTCGTAATAATTCAAACTTAT TCCACATGGACATAGATGCATCTCTGTCCCAAATGATTCGACTCCGATCT CTTGAAATTCGACATCAGCCCAACTTAGAAAAAGTAACTATAGACTTGAG ACACTTTGGAAAGCTTAGATACTTGGACATTTCAGATAACCATAAATTGA GTTCCATTGATTTCTCAAATCGGAGACCCACCCCATCTCAGAAGGAGGNA AGAAGAGATAATCTCCTCCCCACATCATCAGTTGGTCAGTCGTCTTCGAG AACTTCGTCTTGTGAATAA
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