EMLSAT00000012088, EMLSAT00000012088-707935 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012088
Unique NameEMLSAT00000012088-707935
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s865supercontigLSalAtl2s865:171159..172708 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012088 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012088EMLSAG00000012088-694854Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054099EMLSAE00000054099-763027Lepeophtheirus salmonisexon
EMLSAE00000054100EMLSAE00000054100-763028Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773823auto773823Lepeophtheirus salmonispolypeptide
EMLSAP00000012088EMLSAP00000012088Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012088

>EMLSAP00000012088 ID=EMLSAP00000012088|Name=EMLSAP00000012088|organism=Lepeophtheirus salmonis|type=polypeptide|length=494bp
MSLSVVFVVNEATMIFFFLCLVISVSLLYFYLNRRHGYLEKLSLPHEKAF
LCFGSPPILWYNYIHHFYFMEAFKRFKSQTFTRYNGSLPTLTTMNPSIIK
QITIKQFNHFHRTMHKIKDKNLLLTLSDGSLWKLLRKDITPVFTSGKLKE
MMEPVSDIANQFVAYIETQSSEGKSIKIQDKFQGLTLDIINACAYGIKTN
SSEEPDHELLRHSKMLLNDSFITKNVITSVLILLFNSFPGMFKYVDMFGK
ANDELIKIANSIIETRESHNIEKKDFLNVLVQMRKKSHEDPNTLLNDEII
TAQAIIFFIAGYSTTSTTLCCLTYMLATHPEIQEKLYKEIVSSEDKDFSE
HSYTSAVIKETLRMYPPVALHLRVCAKDTEVEGIPIKKGTIIEMPIYASH
YNPEFFPNPNEFKPERFFQENNLEIIPNTYRPFGNGNRSCIAYRFAMMEX
QLILEKLVKKFEILPTHETKMVHLKGSMFLLEFEDIGVEFKARA
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mRNA from alignment at LSalAtl2s865:171159..172708-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012088-707935 ID=EMLSAT00000012088-707935|Name=EMLSAT00000012088|organism=Lepeophtheirus salmonis|type=mRNA|length=1550bp|location=Sequence derived from alignment at LSalAtl2s865:171159..172708- (Lepeophtheirus salmonis)
ATGAGTTTAAGTGTTGTATTTGTTGTGAATGAAGCTACAATGATTTTTTT CTTTCTGTGTCTCGTGATTAGTGTATCTCTGCTATATTTTTATTTAAATC GTCGTCATGGATATCTGGAAAAGTTATCACTTCCTCACGAAAAAGCATTC CTTTGTTTTGGAAGCCCTCCCATCCTCTGGTATAACTATATCCATCACTT CTACTTCATGGAGGCCTTCAAACGCTTCAAATCTCAAACATTTACTAGAT ACAACGGATCCCTCCCTACCCTCACTACTATGAATCCTAGCATCATAAAA CAAATTACTATTAAGCAATTTAATCATTTCCACCGTACCATGCATAGTGG AAAGTATTCGTTTCAGTTTTGGAGGGAGAATAGTAACACAAATTATGTTT TATGATTTCAGAAATAAAAGATAAGAACTTGCTATTGACTTTATCGGATG GMTCCCTTTGGAAACTTCTTCGTAAAGACATAACGCCAGTGTTTACTTCT GGAAAATTAAAGGAAATGATGGAGCCAGTTTCTGATATAGCTAATCAATT TGTAGCTTATATTGAGACGCAAAGTTCGGAAGGAAAGTCAATCAAGATTC AAGATAAGTTTCAAGGGTTAACTTTGGACATCATTAATGCTTGTGCGTAT GGAATTAAGACCAATTCCAGTGAAGAGCCTGATCACGAACTTTTAAGACA TTCAAAGATGTTATTGAACGACTCTTTTATCACCAAAAATGTTATAACAA GTGTATTGATTTTATTATTTAATAGTTTCCCTGGAATGTTTAAATACGTG GATATGTTTGGAAAGGCTAATGATGAGTTAATTAAAATAGCAAATTCAAT CATTGAAACCCGTGAAAGCCACAACATAGAAAAGAAGGACTTTCTAAATG TATTAGTTCAAATGCGGAAAAAAAGTCATGAAGATCCTAATACATTGCTG AATGATGAAATTATAACTGCTCAAGCCATTATTTTTTTCATAGCAGGCTA TTCTACTACCTCCACGACACTGTGCTGTTTGACTTACATGTTAGCAACTC ATCCTGAGATTCAAGAGAAATTGTATAAAGAAATTGTATCATCAGAAGAC AAAGACTTTTCTGAACATAGCTATACATCAGCTGTAATTAAGGAAACACT CAGAATGTATCCACCCGTGGCACTGCACCTCAGAGTCTGTGCAAAGGACA CTGAAGTTGAGGGAATCCCCATAAAAAAAGGAACTATTATTGAAATGCCA ATCTATGCCTCACACTATAATCCAGAGTTCTTCCCAAACCCAAATGAGTT CAAACCAGAAAGATTTTTCCAAGAAAACAACTTAGAAATTATACCTAATA CGTATCGGCCGTTTGGGAATGGAAATCGATCTTGCATTGCTTATCGGTTT GCAATGATGGAGMTACAACTCATACTTGAAAAATTGGTTAAAAAATTTGA AATTCTCCCAACACATGAAACCAAAATGGTGCACTTAAAAGGAAGCATGT TTTTGTTGGAGTTTGAAGACATTGGAGTTGAATTCAAAGCGAGAGCTTAA
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