EMLSAT00000012138, EMLSAT00000012138-707985 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012138
Unique NameEMLSAT00000012138-707985
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s874supercontigLSalAtl2s874:18023..18559 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012138 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012138EMLSAG00000012138-694904Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054411EMLSAE00000054411-763339Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769347auto769347Lepeophtheirus salmonispolypeptide
EMLSAP00000012138EMLSAP00000012138Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012138

>EMLSAP00000012138 ID=EMLSAP00000012138|Name=EMLSAP00000012138|organism=Lepeophtheirus salmonis|type=polypeptide|length=178bp
MISEPIRNFRTLRSKNGTRAFLKDCPNGQLSVEEFKKIYGNFFPYGDASK
FAEHVFRTFDANNDGSIDFREFLCALSVTSRGKLEQKLKWAFTMYDLDGD
GFITRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDKIFRQMDKNMDGK
LSLEEFIEGAKSDPSIVRLLQCDPQSSH
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mRNA from alignment at LSalAtl2s874:18023..18559-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012138-707985 ID=EMLSAT00000012138-707985|Name=EMLSAT00000012138|organism=Lepeophtheirus salmonis|type=mRNA|length=537bp|location=Sequence derived from alignment at LSalAtl2s874:18023..18559- (Lepeophtheirus salmonis)
ATGATCTCCGAACCAATACGGAATTTTCGGACTCTGAGATCCAAGAATGG
TACAAGGGCTTTTTTGAAGGATTGTCCAAACGGACAACTTAGTGTAGAAG
AATTTAAAAAAATCTACGGTAATTTTTTTCCTTATGGAGACGCCTCTAAA
TTTGCTGAACATGTCTTCAGAACTTTTGATGCCAATAATGACGGAAGCAT
CGACTTTAGAGAATTTCTATGTGCTCTCTCTGTCACATCTAGGGGTAAAC
TGGAGCAGAAACTCAAGTGGGCTTTCACCATGTACGATCTAGACGGGGAT
GGCTTCATTACTCGACAAGAAATGCTTGAAATCGTTACTGCTATATATAA
GATGGTTGGTTCTGTCATGAAAATGCCAGAGGATGAGTCCACTCCTGAAA
AACGAACGGATAAAATCTTCAGGCAAATGGATAAAAACATGGACGGAAAG
CTCTCACTTGAGGAATTCATTGAGGGGGCTAAGAGTGATCCATCCATTGT
GAGACTTTTACAGTGTGACCCGCAATCATCGCATTAA
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