EMLSAT00000012157, EMLSAT00000012157-708004 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012157
Unique NameEMLSAT00000012157-708004
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s876supercontigLSalAtl2s876:236420..240909 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012157 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012157EMLSAG00000012157-694923Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054482EMLSAE00000054482-763410Lepeophtheirus salmonisexon
EMLSAE00000054483EMLSAE00000054483-763411Lepeophtheirus salmonisexon
EMLSAE00000054484EMLSAE00000054484-763412Lepeophtheirus salmonisexon
EMLSAE00000054485EMLSAE00000054485-763413Lepeophtheirus salmonisexon
EMLSAE00000054486EMLSAE00000054486-763414Lepeophtheirus salmonisexon
EMLSAE00000054487EMLSAE00000054487-763415Lepeophtheirus salmonisexon
EMLSAE00000054488EMLSAE00000054488-763416Lepeophtheirus salmonisexon
EMLSAE00000054489EMLSAE00000054489-763417Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775068auto775068Lepeophtheirus salmonispolypeptide
EMLSAP00000012157EMLSAP00000012157Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012157

>EMLSAP00000012157 ID=EMLSAP00000012157|Name=EMLSAP00000012157|organism=Lepeophtheirus salmonis|type=polypeptide|length=417bp
MTVMRGNXKRRSSLCQYKGLVNKAIKTSITAEQKKRSIHEEVKGPDLKSS
CTPLRQTRKMFKAFSAASSSGMKACTMKRTNSATRYASPLPSKFTSTMSS
SSKVFLSSKSVSALLPRTGGGGPSNIVRGLTSLLPLKSPKPSAKDLRIKI
XXESLRKRVKEEEAIRRKEERAKLKIEEKKMQREARMKKVMENKKMIERH
LSNADLRKQENTAKSNKNDEKILKNEIREREERERERTRLKEIQIKQLQE
EKLLEAEKKRLEECYENKFKVTNGTHFHANETFSKKPIEXTKPQLNITIT
KNAEETTVNSYDMTPAPEDRSPEPLEDENNYDVGDLKSDDDTDDEDRPKK
IVPKWAGGSSLRQAILQQTHYPPNVDAIFDFPPMPNLELMFPFKKQRFFK
RTSSAVWKNAPISQTHF
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mRNA from alignment at LSalAtl2s876:236420..240909+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012157-708004 ID=EMLSAT00000012157-708004|Name=EMLSAT00000012157|organism=Lepeophtheirus salmonis|type=mRNA|length=4490bp|location=Sequence derived from alignment at LSalAtl2s876:236420..240909+ (Lepeophtheirus salmonis)
ATGGTGAAGGAGGAAAATGAGGGCGAAGAGGAAGGGATTCCTCTTCTACT
TCCCAAAACACCCAAAGTATCCAAGAAGAGGCCCAATGTCAAACGGAAAA
GTGAAGATCTCTACCAAGAAGAGGAGGAAACCTCCTTTAAAAAAAGGGCC
GGAAGCATTTCCATTCCGACTCTTCCACAGTAATGCTCATCCTCATTCAT
TTTGTATCCCCTCTCACCATAAAAGTCCTTTCACTCACCTCTTAAATTCC
AACATCATCTGMCCTGAGAATCCCATTCAATACACATTCAGTATATTTCC
TTCTAGGAACGATCTAGACACAAACTTACGTACATTCAGTTCAAAATAAT
TATTTCTCACAAACACAACGTCCATTGAGCTACATCGTTCCATTAGTTGA
TATTTTTATTACATAAAATCCACAAACTTCCAATATATCTTGATCAAAAC
CCCATCAAATGGTTTTAATAATAATAAAAAAGATATAACAACTGCATTTT
ATACTACTTGATGTCAAGGATGTACACTGATTAAGTACTGAAAATCCTTA
AAAAATTCATTGATTAGGTACGATAAAATTAGAATATTTAGAGAAAAATA
TCTTATCATTTTTCTCTACATTATGGAAATAAGATTGTATAACGATGTTA
TGACCTATTTAGAATACATTTTAGGGTCAGATATATATTAAAACTATACA
ATAGAGGGATATAATTATGATACGACAGTAATGTTCAAGTCCTTTTATTT
GTTAGTCCCATTTTGATATCCAATAGTGTGCTATATTCTCCCTAATATTA
ATGAAAATATGGTTTTTAATGTTATAAAACTTMGTTGTTTAGTCCCTTAA
ATTGGCCGACATCAACAATGCTGACAATGTGAAAGCATATTGAAATTATT
GCGTCCCATTTCGGTATTTCAAATTGAATCTTAATTTGTACTTATTCTCA
TTTTAGGAATTGTCTACTGACGAGGAAAAGTCAGAGATGTCGTCCCATAG
TTCATTGAAGCCAACAACAGAAAAGAAGAGCAAGTCCTCTCAAGAAGAGG
ATAATGTCGAAGTATGTCCTGAAATCATCGTTTTGCAAAAAGAAATTTCT
CATGAAGAAATGTCTGTAGATGAACAACCTACACTTCATTTGAAGTCTAG
CGCGAATGATCAAAACAATACACCTAAGAGATCTTCCTTTAAAAGAGTAG
TTGTAAAGTCTGTTCCTAGCAAAGAAGTTGAGAGTAATGAGAAATTCACA
AGAAAATTCAGTGTAGAAAGGAAATTACACACTTCTATATCAGATAAAGA
TTCGGACAATGAAAACAACTTAAAATCAAAAAAAACTTTGTCGAATCCTT
TAAAAACTTCAGAATCACCACCCCTCCCAGCACGGCGTTCTAAAAGTAAA
AGAAGTATTTCCAATTCTCCTTTGCAAAGTACTTGCAACTCAACTTTTGT
TATACCTCAAAATTCGCCCAAAGAATTAAAATTGAGTAATGGAACAGAAG
AAGAAGACAAAAAAACACCACTTCGACGCCGATCTTCAAGACTCTCCGAT
CTATCTATTCAATCTGACAACCAAAAGGATATCAAACACTCTCCAACTAA
AAAAAATTGCTCTAAAGAATCGAGACTTAAAGACTCTAAAGAAAATATTA
TCCTTAAATATGATAACCAGCAAGTTGACTCCTGCTCTGTTCGTCTAATG
AGACACACATCAACAATGGACCTTCAGAATTTTGAATCACCCAAGTTAAA
ATCAACTAAGATTAATGACTGTAATGAGAGGGAATNCTAAGCGAAGAAGT
AGCTTGTGTCAATACAAAGGCCTTGTTAATAAGGCAATCAAAACTTCAAT
TACTGCTGAACAAAAAAAACGTAGTATCCATGAAGAAGTCAAGGGTCCAG
ACTTAAAGGTTATTTGAACGTGAATGCCTTTTCATTTATTTAATTTTTAT
GTTATTTAATTTCTAGTCTTCTTGTACACCTTTACGTCAAACAAGAAAAA
TGTTCAAGGCATTCTCCGCTGCAAGCTCCTCTGGTATGAAAGCATGTACA
ATGAAGAGAACCAATTCAGCCACAAGATATGCTTCTCCTCTCCCTTCAAA
ATGTAATGTTGCAAATGAGGATTTTTAATATTTTTTGTAATGATACATGT
TTCTATTTCATTAGTCACATCAACTATGTCGAGTAGTTCTAAAGTCTTTT
TGTCGTCCAAATCCGTATCTGCAGTAAGTATTGTTGGTTTGAGAATAGTA
ATATGTATATACATTATTTTTTAAAATATAAAATTCATCAGCTTTTACCA
AGAACTGGTGGTGGTGGGCCAAGTAATATAGTAAGAGGCCTAACCTCCCT
CCTGCCATTAAAGTCTCCTAAACCTTCCGCTAAAGACTTACGGATTAAAA
TAGAWGAKGARTCCCTTCGAAAGCGGGTCAAAGAGGAAGAAGCTATTCGA
AGAAAGGAAGAACGGGCTAAACTTAAGATTGAAGAAAAAAAAATGCAAAG
AGAAGCTAGAATGAAGAAAGTGATGGAGAATAAGAAAATGATCGAAAGAC
ATCTCTCCAATGCTGACTTACGGAAGCAAGAAAACACAGCTAAAAGTAAT
AAAAATGATGAAAAAATCCTCAAGAATGAAATTCGCGAGCGAGAAGAGGT
TTGTTCACAATATTTGAAAGTATGTAGTTTATTCACATTCCACATTTTAT
GTATTTAAAGAGGGAAAGAGAGAGAACTCGACTGAAGGAAATTCAAATTA
AGCAACTACAGGAGGTACTTAGATACTTGCTAAAGTCAAACGATATAAAT
AATAATGAATTGATGATATTTTTTAATAGGAAAAACTACTTGAGGCTGAA
AAGAAACGTTTGGAAGAGTGTTATGAAAATAAATTTAAAGTAACAAATGG
GACTCATTTTCATGCAAACGTAAGAATTTTACTTCTCAATTACCCGTAAT
TGAAATACAACTAAAAATCTATATTGCTGTATATATTTTTCCTCTTGTCA
GGAGACTTTCTCGAAAAAACCAATAGAGAYCACRAAGCCACAACTTAACA
TAACCATAACCAAGAATGCAGAAGAAACCACCGTTAATTCTTATGACATG
ACTCCTGCTCCCGAGGATCGATCTCCAGAGCCCTTAGAAGATGAAAATAA
CTACGATGTTGGGGATCTCAAGTCCGATGACGATACAGATGACGAGGATC
GTCCCAAAAAGATTGTCCCTAAATGGGCAGGTGGGTCTTCTCTACGTCAA
GCCATCTTGCAACAAACGCATTATCCACCTAATGTTGATGCTATATTTGA
CTTTCCACCTATGCCCAATTTGGAGCTCATGTTTCCCTTTAAGAAACAAA
GATTCTTTAAAAGAACGTCGAGTGCAGTGTGGAAAAATGCTCCAATATCC
CAAACCCATTTTTAAACGTTTTAGAATGTGACATTGTTTTTTTTATAAAG
CAATCATTATTGTGTTTATTTTTCTTCATTCTTTTAAACCTTTTTTCTTA
CCAATACATTTTCATATAGTATCTTCATTTTTAATTGTAATATTGTTAAG
CAAGAGAAAGTTGGTGATAATGCTCAAGAGTCCTTTATTTTCTTATTATG
AGGAAAAATTATAATATATAATAAAGAGAATGTAATAATATTAATATTGA
ATTAATTATCTTCTACAACAAATCAAATCTTATTGTTTTTAAAAACATTA
TTTATATTCACAGCCAACTAAAAAATGCCTTTTCATTCAAAGGAAAAATA
AAAGATTGCATGTCTGTTGTAAAATAATCAGGACACATTTATGATATAGA
TTTTCATCAAATTAAAAGCAAAACTGTAAGGAAAATGAAAGAAAAAAGTA
ATCCGAATTATACAAAATACGGACTTTCCCCATGATCTGGGAACACTTCA
TCCATTTCTATTTTGTTTTTGTTGACTTTTTTTAGATGTTTTTTAACTAT
GAATGTATGCAATAATTAAGTAAATAGGAAAATACAACATTAAAAACTGC
TTTTGAAGTCAATAAAATTCTTATTTTAGAAAAATAAAATTTAAACGAAT
ATATATACTCATCAATAAGCGTCTTAAATAAAGCAAACTGGATATCAATT
AATTAATACGATGAATAACATTTCGACTAAGATAGGAGAAAGATGAATAA
ATGGGGGCAATCTTTGGATTACAGCTAAGAGTAACATAATTTCATATCTC
AATGGATTTTAACAACTATATTATAAAGAGAAAAAGAGAGCAAAATTATA
ATTATTATTCAGAAATGGAGTATGGATGTACTAAGATATTTTATGAACGA
AAGCATTTAAAGCAATGGGGGACATGCATACGTATGTACATTGACAAATC
ATGTCGTCTGTACTATGTATCTAATATTTTGGAAACCTGCCTTTGAAGAA
GAATAATGCAATGCACTTTTAAAAAGATAAAATATTTATACACGTATATA
TGTTTAATTCAGTGTCATAAAAATAATTGACTATAACATC
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