EMLSAT00000012160, EMLSAT00000012160-708007 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012160
Unique NameEMLSAT00000012160-708007
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s876supercontigLSalAtl2s876:58936..59500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012160 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012160EMLSAG00000012160-694926Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054513EMLSAE00000054513-763441Lepeophtheirus salmonisexon
EMLSAE00000054514EMLSAE00000054514-763442Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770951auto770951Lepeophtheirus salmonispolypeptide
EMLSAP00000012160EMLSAP00000012160Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012160

>EMLSAP00000012160 ID=EMLSAP00000012160|Name=EMLSAP00000012160|organism=Lepeophtheirus salmonis|type=polypeptide|length=168bp
MSSYESFLDLFGNVVERNLMIATLVYLKVDGVIVSKENIIQTFFEVMDNL
SIENKVSILRMHPILGDKVPASALDSTNEQSYLGVKNVSQETLDYLNDLN
QKYLNKFKFPFVICVKKKSFDEVLIEIAERCTKLYEEEVSLGVEEVKKIC
EIRILDTFEKKEDIIRQL
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mRNA from alignment at LSalAtl2s876:58936..59500-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012160-708007 ID=EMLSAT00000012160-708007|Name=EMLSAT00000012160|organism=Lepeophtheirus salmonis|type=mRNA|length=565bp|location=Sequence derived from alignment at LSalAtl2s876:58936..59500- (Lepeophtheirus salmonis)
ATGAGTTCATATGAGTCTTTTCTTGACTTATTTGGAAATGTTGTGGAAAG
AAATCTAATGATTGCTACATTGGTGTATTTAAAAGTTGACGGTGTTATAG
TTTCTAAAGAAAATATAATTCAAACTTTTTTTGAAGTGATGGACAACTTA
TCAATAGAGAATAAAGTCTCCATTTTACGAATGCACCCTATTCTTGGAGA
TAAAGTCCCAGCTAGTGCTCTAGACAGTACTAATGAACAAGTAGGATATA
TTTACTCTCTTAATGTTTGGACCTTTTTGCATCTTTTTTTTTTTACAGAG
CTATTTAGGTGTAAAAAATGTGAGTCAAGAAACGCTTGATTATCTCAATG
ACTTGAATCAAAAATATTTGAATAAGTTTAAATTTCCATTCGTCATATGC
GTAAAAAAAAAGTCATTTGATGAGGTTTTGATAGAAATTGCAGAGAGATG
CACCAAATTATATGAAGAAGAAGTGTCACTTGGGGTCGAAGAAGTGAAGA
AAATTTGCGAAATTAGAATTTTGGACACGTTCGAAAAAAAAGAGGATATA
ATTCGACAACTTTAA
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