EMLSAT00000012165, EMLSAT00000012165-708012 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012165
Unique NameEMLSAT00000012165-708012
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s877supercontigLSalAtl2s877:146733..147560 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012165 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012165EMLSAG00000012165-694931Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054527EMLSAE00000054527-763455Lepeophtheirus salmonisexon
EMLSAE00000054528EMLSAE00000054528-763456Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773256auto773256Lepeophtheirus salmonispolypeptide
EMLSAP00000012165EMLSAP00000012165Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012165

>EMLSAP00000012165 ID=EMLSAP00000012165|Name=EMLSAP00000012165|organism=Lepeophtheirus salmonis|type=polypeptide|length=237bp
MNFNPIGYIRTVYTNKNGTPRQGNICQESHGTLEVNLGDNNAQYALENLH
EFSHVWIIFVFHKNGKAFTKTKVTPPRLSSRVGVFSTRSPHRPNPIGLSL
VRLESIEHNMMYLSGIDLLDGTPVLDVKPYVPSYDSPSTLEGSKQETIKF
PDWIKKTSSLTCSFTSKALSDLKKIDKEDLVNPITSILEADPRSCYRKDK
CSDKLYFFSHDGVHLTAWFDDEDNMVQILKAKIDDQI
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mRNA from alignment at LSalAtl2s877:146733..147560-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012165-708012 ID=EMLSAT00000012165-708012|Name=EMLSAT00000012165|organism=Lepeophtheirus salmonis|type=mRNA|length=828bp|location=Sequence derived from alignment at LSalAtl2s877:146733..147560- (Lepeophtheirus salmonis)
ATGAACTTTAATCCAATAGGATATATACGGACTGTTTATACGAACAAAAA
TGGAACACCAAGACAAGGAAACATCTGTCAGGAATCCCATGGAACGTTAG
AGGTGAATTTGGGGGATAATAATGCCCAATACGCACTTGAAAACTTACAT
GAGTTTTCTCATGTATGGATTATCTTTGGTATATTTTTTTAGTCATTTAG
TTTATTTATATATTCAATTAATTATTGAATGGATTCCAAATAAAGATAGT
TATTTTTTTTGTACAAACATATTTCTCAATCATAATTCATAGTGTTTCAT
AAAAACGGAAAAGCCTTCACCAAGACCAAGGTAACTCCTCCACGTCTATC
CTCCCGAGTTGGTGTCTTCTCTACACGTTCTCCTCATCGCCCTAATCCCA
TAGGTCTCTCTCTTGTTCGCCTTGAGTCTATTGAACATAATATGATGTAT
TTATCCGGTATTGACCTGTTGGATGGAACACCCGTATTAGATGTCAAACC
CTATGTCCCATCTTATGACTCCCCTTCTACATTGGAAGGATCAAAACAAG
AGACTATTAAGTTCCCTGATTGGATCAAGAAAACTTCTTCTTTAACGTGC
AGTTTTACTTCAAAAGCACTCTCTGATTTGAAAAAAATAGATAAAGAGGA
TCTGGTCAATCCCATTACTTCTATCTTAGAAGCAGATCCTCGTTCATGCT
ATAGAAAAGACAAGTGCTCCGATAAACTTTATTTCTTCTCACATGATGGA
GTACATTTGACTGCGTGGTTTGATGATGAAGACAATATGGTTCAAATTTT
AAAAGCAAAAATAGATGATCAAATTTGA
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