EMLSAT00000012178, EMLSAT00000012178-708025 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012178
Unique NameEMLSAT00000012178-708025
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s87supercontigLSalAtl2s87:365406..368432 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012178 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012178EMLSAG00000012178-694944Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054598EMLSAE00000054598-763526Lepeophtheirus salmonisexon
EMLSAE00000054599EMLSAE00000054599-763527Lepeophtheirus salmonisexon
EMLSAE00000054600EMLSAE00000054600-763528Lepeophtheirus salmonisexon
EMLSAE00000054601EMLSAE00000054601-763529Lepeophtheirus salmonisexon
EMLSAE00000054602EMLSAE00000054602-763530Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776906auto776906Lepeophtheirus salmonispolypeptide
EMLSAP00000012178EMLSAP00000012178Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012178

>EMLSAP00000012178 ID=EMLSAP00000012178|Name=EMLSAP00000012178|organism=Lepeophtheirus salmonis|type=polypeptide|length=621bp
MEEEEDDCMREDDLLRRMAEGSSSRNSVLIFPPSDEEDNGSASRKLPPKL
NYSRKSMPRVRPFDEEEPSSPPTQGVMSLNLFDSPAPSSXPATSLTSLTR
RLHSASGLKPNVLFIHRKARTEPRKSVLYDSKVNRANLNPFTPEALFISH
QKRNRLRVNYKSSHGGSFSELQKSLDQISDLSDDNDSSLSEFQPPHAKRI
RVSDIHISRYNKEFVELQSLASGEYGCVKVARHRLDGMVYAIKVTKKVIQ
PCSHEEHVAMNEVFAHAAMMKHKHVIRYFNSWVENCQVYIQTEYCEGGSL
QSQINSYRKRNRRFPESELRTVLTQIAKGLHYIHSKDLVHMDIKPENIFI
AIEHPSSPSTSPGGSIVADAPARNSGNESTDSGNHSGNDAVNTLRGNLKG
TERLTYKIGDLGNIAQIHGDFIPEEGDCRYMAPELFAIHVDRSKLSKADV
FSLGLSIYAXASLEDIPKNSMDDPVMYDRIKRGDLHYLDNYSKEFNQVLR
SMVSPDPAARPSPSKLMTIFLNNSNYAVKSRSQLCKELKDSEARIRQLEE
LLNHRQAAVSNSFSIMDNSXSSSISSSSNNQSSCTTTHISLKVTSTPNNM
LSKTSSRAVGKGTIKSSSCIL
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mRNA from alignment at LSalAtl2s87:365406..368432-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012178-708025 ID=EMLSAT00000012178-708025|Name=EMLSAT00000012178|organism=Lepeophtheirus salmonis|type=mRNA|length=3027bp|location=Sequence derived from alignment at LSalAtl2s87:365406..368432- (Lepeophtheirus salmonis)
ATGGAAGAAGAAGAGGATGATTGTATGCGTGAGGACGATCTATTAAGGCG
CATGGCTGAAGGATCCTCCTCCCGTAATTCCGTACTTATTTTCCCGCCCT
CGGATGAGGAAGACAATGGCAGCGCCTCCCGTAAGCTCCCTCCCAAGCTG
AATTACTCTCGCAAGTCCATGCCCCGTGTCCGTCCCTTTGACGAAGAAGA
ACCCTCTTCGCCGCCCACGCAGGGTGTCATGTCTCTTAATCTTTTTGATT
CRCCGGCRCCATCTTCCKCRCCTGCCACATCTCTCACTTCTCTGACTCGA
CGATTACACTCTGCAAGTGGGTTAAAGCCCAACGTACTCTTCATTCATCG
AAAAGCACGAACGGAGCCACGAAAGTCTGTTTTATACGACTCCAAAGTCA
ACAGAGCTAATCTAAATCCTTTTACTCCAGAGGCACTCTTCATCTCGCAT
CAAAAGCGTAATAGATTAAGGTATGCACACTTGATAAACAAGACCATCAC
TTCTTTATATCCATTAGTTTAAAGGCTCGGTATAAATCGATATTTCGGTT
CTTCAGGCAGTAATCCAATTATTTTGTTTTGCCCCTGTACAAATGTAAAG
ACTGATCTTTTCTACATTCTTGATGAATGAATTGTACAAATCTGATGTAT
GCAATATTTTTTCCCTTATATGACGTTATTCTTCTATTTTGAAACACATA
GTAATGTCATTTAGGAATTAAGCTAGACCGAATTTTTAAGGAGACCCTAA
CTTCTATAAAACCAAGCTTATTCGATATTCAGGCAGTAATTTAATCCTTT
ACAAATCCGTGACCATTTTAATGCACTCTGACCAATGAGTTGTGGAGGCA
TTTTAATACGCTTAACGTAATTTATATTTAGTCAATATAGTCAGTTTTTT
TTAAATGACACCAAATTTGGTACTTATAAATTAGTTTGATATGTCCATTA
AAAAAATCTTTACGGTCTTAGAAGGGTTTAAAATTTTCAGAGCAAAACCT
TTACTTCTTGTAAAGAAACGAATTAGTTTGTTCCATTAGAAATCATAGTA
GTGTCGGACATTATTTTTAAAACTATATCCAACACTAATATTTATATACA
TGTTATACAACTAGCAACAGGTCATTCCTGGTCTTCCCTATCCTTAGCCT
TACACACAAAAAAGCAGTTTCTTCCTTTTCTCTTCTGTTGTTAGAAGGGG
GATTGCATATTACAGATGGTTCTGTCTCTCTGTTGCTAACCCAGGAAACA
ACACAACAACGTAACAATAAAAATGAAGGAAGGGAAACTACTTTATTTTT
TCTTTCCTCTCCTCATCTTAAAAATACACCTAGCAATGCCAAACTTATCT
CTCTAACTTATTTTTTTTCTTTCCTATAGAGTAAATTACAAGTCGTCCCA
TGGAGGAAGTTTCTCTGAACTACAAAAGTCTTTAGATCAAATAAGCGATT
TGTCAGATGATAATGATTCATCTCTCTCTGAATTCCAACCTCCTCATGCT
AAAAGAATCAGAGTTTCTGATATTCACATCTCTAGATATAATAAAGAATT
CGTAGAATTACAGTCTTTGGCATCAGGAGAGTATGGATGTGTCAAAGTCG
CTCGCCATCGTCTTGATGGAATGGTATATGCAATTAAGGTAAGAAAACAT
TACCCTTGTTTGTTTATTGAATATATATATATATATTTCATTATTTACTT
TATTAGGTAACCAAGAAAGTGATTCAACCCTGTAGTCATGAAGAACATGT
CGCCATGAATGAAGTGTTTGCCCATGCTGCCATGATGAAGCATAAACACG
TCATTCGATACTTTAATTCCTGGGTCGAAAACTGTCAAGTCTATATTCAA
ACTGAATACTGTGAAGGAGGCTCACTTCAATCCCAAATCAATTCCTACAG
AAAGAGAAATCGGAGATTCCCTGAAAGTGAACTCAGAACTGTTTTGACTC
AAATTGCTAAGGGATTACAGTAAGTTTTTATACTTTGTGATTGATATGAA
TTTTATGCACAATACTAATTGCTTCCTCTTTTTTCTTTTTGCAGTTATAT
TCATTCCAAAGACTTGGTACATATGGATATTAAGCCTGAAAATATATTCA
TCGCCATCGAACATCCATCCTCACCTAGTACATCTCCTGGAGGTTCCATT
GTAGCTGATGCGCCTGCTCGTAACAGTGGTAACGAATCCACTGACTCTGG
TAACCACAGTGGAAACGATGCAGTCAATACCCTTCGTGGCAACCTTAAAG
GCACTGAACGCCTTACTTATAAGATCGGTGACCTTGGCAACATTGCTCAA
ATCCATGGAGATTTCATTCCTGAGGAAGGAGATTGTCGCTACATGGCTCC
TGAATTATTTGCAATCCACGTTGACAGATCAAAATTGTCAAAAGCTGACG
TTTTCTCTCTTGGACTCTCAATTTATGCAKCAGCCTCTTTAGAGGACATT
CCTAAAAACTCTATGGACGATCCAGTCATGTATGATCGGATTAAAAGAGG
AGATCTTCACTATCTCGATAATTATTCCAAAGAATTCAATCAAGTCCTAA
GGGTAAGTTCACATTTTTATGTTTGATTATATATAATTAATTAAATTTTT
GCCAATGTTATTCAATTTTTTATACAAGTTCTAATTGTCTTTTATTCTAT
TTGTTTTACAGAGCATGGTTTCGCCTGATCCAGCAGCTCGGCCCTCACCG
AGTAAGCTCATGACCATTTTCCTTAACAACTCGAACTACGCCGTGAAATC
CCGGTCGCAATTATGTAAAGAACTTAAGGATAGTGAGGCTCGCATTCGAC
AGTTGGAAGAGCTCCTGAATCATCGACAGGCAGCTGTCTCCAACAGTTTC
TCCATTATGGATAACTCCKTATCTTCATCGATTTCCTCCTCGTCAAATAA
CCAATCCAGCTGCACAACCACTCATATTAGCCTAAAAGTCACATCCACTC
CTAACAACATGTTAAGCAAAACTTCGAGTCGTGCAGTTGGGAAAGGAACT
ATAAAGTCGTCGTCTTGTATCTTGTAG
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