EMLSAT00000012195, EMLSAT00000012195-708042 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000012195
Unique Name	EMLSAT00000012195-708042
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s881	supercontig	LSalAtl2s881:201986..208857 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000012195 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000012195	EMLSAG00000012195-694961	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000054670	EMLSAE00000054670-763598	Lepeophtheirus salmonis	exon
EMLSAE00000054671	EMLSAE00000054671-763599	Lepeophtheirus salmonis	exon
EMLSAE00000054672	EMLSAE00000054672-763600	Lepeophtheirus salmonis	exon
EMLSAE00000054673	EMLSAE00000054673-763601	Lepeophtheirus salmonis	exon
EMLSAE00000054674	EMLSAE00000054674-763602	Lepeophtheirus salmonis	exon
EMLSAE00000054675	EMLSAE00000054675-763603	Lepeophtheirus salmonis	exon
EMLSAE00000054676	EMLSAE00000054676-763604	Lepeophtheirus salmonis	exon
EMLSAE00000054677	EMLSAE00000054677-763605	Lepeophtheirus salmonis	exon
EMLSAE00000054678	EMLSAE00000054678-763606	Lepeophtheirus salmonis	exon
EMLSAE00000054679	EMLSAE00000054679-763607	Lepeophtheirus salmonis	exon
EMLSAE00000054680	EMLSAE00000054680-763608	Lepeophtheirus salmonis	exon
EMLSAE00000054681	EMLSAE00000054681-763609	Lepeophtheirus salmonis	exon
EMLSAE00000054682	EMLSAE00000054682-763610	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774429	auto774429	Lepeophtheirus salmonis	polypeptide
EMLSAP00000012195	EMLSAP00000012195	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s881:201986..208857+

protein sequence of EMLSAP00000012195

>EMLSAP00000012195 ID=EMLSAP00000012195|Name=EMLSAP00000012195|organism=Lepeophtheirus salmonis|type=polypeptide|length=599bp
MLNTGKLAGKTIYITGXSRGIGKAIALKAAKXGARIVVAAKTXEPHPKLP
GTIYTAAEEIEKAGGKALPCVVDVRSEESVQQSVELAVRTFGGIDILINN
ASAISLTGTQQTSMKKYDLMNSVNARGTYLVSKCCLPYLIDSKNNPHILN
ISPPMSMNPVWFKNHVAYTMAKYGMSMCVLGMAEEFRSKRIGVNALWPQT
AIMTAXMXMLGGKDIGSQCRKPDIMAXAAYVILNRIAREYTGHFAIDEDI
LREEGVKDFDGYAVAPGNELMLDFFLDGDVKKENASSDKSERDGIDSIMT
KIGQKINPDLVGKTKSVFAFQVSGKEYFIDLKNGAGSCGKGSPSSSPDAT
FILEENDFQSMFEGKLKPQSAFLSGKLKLEGDLAKAMTFEKLMKNMRQYH
TRAGSTYVPRRNYSEMSTDVPTYTNIPQVFDRIKEVANSETIQKVNAVYV
FDVEGEGKYFVDLKKENGLIGKSNINEDPDVTISINQENFLKLFNRELKP
ATAFMTGKLKLSGDLSKAMALEAXMKANGQVGTGDPPSGKPDVTIKMKSS
NLLKLFNRELSPASAFMTGKINVSGDLTKALTLETVMKAIADKKSEEAS

mRNA from alignment at LSalAtl2s881:201986..208857+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000012195-708042 ID=EMLSAT00000012195-708042|Name=EMLSAT00000012195|organism=Lepeophtheirus salmonis|type=mRNA|length=6872bp|location=Sequence derived from alignment at LSalAtl2s881:201986..208857+ (Lepeophtheirus salmonis)
CTTTTATTAAATAGAGATAAAATGTACATTTTTTTATCATAATAGTGATT
CTCAACCGTAATGCACATGGATCCTAGCTTCAAAAAGTCCGTACAATATT
ACATTTATAATATAGTATGTACTGTATTAAAAGGAACAGGGATTCATAGG
TATAAAAAGAAAGAAAGGTGTTTACCAATGTCACAATGGTTTTATCAAAT
AATTATCAGTTAAATACAAGTTCAAATCCATAAATGAAATGCATCTATCC
CTAAGGTGAACGAACGCACTCTCGTTTTCTTTCATTTCCTTTATTATAGT
AGGAGAAGGCTGATGTGAAGGACTACGAGTCCTACAAGTCCTGGTGTTCT
TTGAGTTCATTGGACGTGAAGCTACTACTATGGAAAATCCAAATTCATCG
CTCTCTTTTTTTTTTCTTTTTTTTTTCTTTTTTCACTAGGTAGTATTTAT
TATTTCTACTGTTTTCGTGTATCTCTCAGACTCAAAATTTGTCACATATT
TGGATCAGTGAAGAAATATAATTTATAGAAGATGTTGAACACAGGGTAAG
AATTTTTATAGCATTTAATGGTGAATTTAATATTACTTATTAACTAGGAA
ATTGGCTGGCAAAACCATTTACATAACTGGCGKAAGCCGTGGAATAGGTA
AAGCCATCGCTTTAAAGGCTGCCAAGGAMGGAGCMAGAATTGTGGTTGCT
GCAAAGACMAGSGAGCCTCATCCAAAGCTTCCTGGAACGATCTACACGGC
GGCAGAAGAAAGTAAGTCTTGCTTGGTGAAAATCAATGTCCGTTTATTTG
GACCTTGACAGTTGACATACTTTAGAGTAGACATTCATTCTAATAATTAA
AATGTCCGTTTATTTAAGATATTTAAAGCTTTTTAAAAATGACGTCATCA
TTGTTGATGTCCGCCATTTGGGGGGCTTAAAAACAAGTTTTATTATAATA
AAAACCTTTTTTTTCATTAATATTAAAGGAAATAAATTAATGAACTATTG
GACCATGTCAAAATGGGGCAAACAAATAAAAGGACTTCAACTTTACTTTT
CTATAAAAAGTGTATCCCTCTAATGCCTAATTTTATTATATATCGGACCC
TAACATATATTAAAAATATGTTATTACATCATTATATAATCCTATTCCCA
TATTATAGATAAAAATTAACTAATATCATGGAAAGAAACGGATATTTTTC
TCTAAATATTCTTTTCCTTTTTTTTGTCTCTAATCGATCATAAAACAATC
ATAGTTGTACAAATCAAGGCATTTTTAAGGCTATTTAGTGGATATTACTT
TGATATAATTCAAATATCACTCTTTAATATTTGCATCAATTATTATTTTT
AAAGCCAGTCGATGGCTTTTAATCAAGATTTATTGCAATTTTGTCCAGTT
GATGTATTAAAAATATGTACTTGAGCCCCCAAGATGGCGTCTCCTTCAAT
TATGATGTAATTTATAACGTCAGTGAAAACGCTCTATTCAGTATTTTAAG
TTTATATGGTATTCAATGTGTGGTTTGTAGCATTCTACGTAGTTTTTACG
ACATTTATTTGATTGATGTATAAGTTATAAATGCAATCTACAATGACGCA
GTTATGTAGAATGCAACTTATTTATTGCGTATATGCATATCTTATAAGTG
TTAAGATGTGAGCCTCTATTGTAAATGCATGACCTTTATATGTAACTATT
TATATTGTAAAACAAATCAAATTCTTGGGTTCATTAGCTTGAAGTGGAAT
AATATTACGTTAGTAATTTTGGATATCAATATGTATTTCTAGTTGAAAAG
GCTGGAGGTAAGGCTTTACCCTGCGTTGTTGACGTAAGGTCTGAAGAAAG
TGTTCAACAATCCGTAGAATTAGCCGTTCGTACCTTTGGTGGTATTGATA
TACTAATTAATAACGCATCTGCTATTAGTCTGACGGGTACACAGCAAACC
TCTATGAAGAAATATGATCTCATGAATAGTGTAAATGCTCGGGGAACATA
TCTTGTGTAAGCTCTTCTTCGTGATGCTAAATAATTAACATTAACTCGTT
ATTCATTCGCCTATGTTCTAGATCCAAGTGTTGTCTTCCTTATTTGATTG
ATAGTAAGAATAATCCACATATCCTAAATATATCACCCCCTATGAGCATG
AATCCAGTTTGGTTTAAGAACCATGTAGCTTATACTATGGCCAAATATGG
GATGTCCATGTGTGTTTTGGGAATGGCTGAAGAGTTCAGAAGTAAACGAA
TTGGTGTGAATGCCCTTTGGCCTCAGACAGGTAATTGATTACCTATGTCC
TACTAAACAGTTGACTAATATATTTATGCAATTAGCAATAATGACGGCTG
STATGGYAATGCTTGGAGGAAAGGACATTGGTAGTCAGTGCAGAAAGCCT
GATATTATGGCTGYTGCAGCCTATGTTATTTTAAATCGTATTGCTAGGGA
ATACACAGGACATTTTGCGATTGATGAAGACATATTACGGGAAGAAGGAG
TTAAAGACTTTGATGGATATGCAGTGGCTCCTGGAAATGAATTGATGCTT
GATTTCTTTTTAGACGGAGATGTAAAGAAGGAAAATGCATCCAGTGATAA
ATCAGAAAGGGATGGTATTGATTCCATTATGACCAAAATTGGTCAAAAAA
TTAATCCAGACCTTGTTGGTAAAACAAAGTCCGTATTTGCCTTTCAAGTG
TCAGGTAAAGGATCATTCATATATAAGGATATGATTTATTGACTTTTTTT
GTTACTTTGACGCCTTTTAAAAGTAGCATTGGAAATTTTCCAGAGGTGGA
AAAAATCTTTATACTGCAAGTTGAACGATTTCTTTAGAGCTAATTTCAAG
TTTGTATGTAATTATAATATAAGACTCTATAGTTTTAAGGTTATTCTTGA
GTTAGGTATAAAATAGCTTTCGAGTCGCAATTCTTCAAAATGTGGACTTA
AGCCCCCATCTCTGGTAATTTCCTTGGTATAAATTTGGTTAGAATCCTTC
CTTTACCTATAGTTCACTTCTTTAAGCAAAAAACATCATTGAGAAACCTT
AGGCCTACTCATTAAGTATCAATAACAAAATATAATCTTTTAAATTAAGG
AGTTTCATATTTCATTGACAAAAAAAGACAGCTAATTTATGTATAGTTTG
ATATCTAATCGTTGACTTTATTTTATTATATAATTAATTTCATAGGAAAA
GAATATTTTATTGATCTTAAAAATGGTGCTGGGTCATGTGGAAAAGGGTC
TCCATCCTCATCTCCAGATGCTACTTTTATTTTGGAAGAAAATGATTTTC
AATCCATGTTTGAAGGTTTATAATAATATTTTATCATATTTGTGTATTCT
GGTAGTTTTCAATCATATTTTACTTAATAATTATGATTGTAAAGCGAGTT
AAAATTGTAAAGACGTTACATATTAAGTATTAAGTTTTTTCTTTTCTTTT
TCGTCAATTCATTTCAATTAATGCTCACATTATATATCACATATTTAATA
CTAAATATTGTATTGACGTACGTTACTTACTCTTTTTTCTGTATAGGTAA
ATTAAAGCCTCAAAGTGCATTTCTCTCTGGCAAATTGAAGCTCGAAGGAG
ATTTAGCAAAAGCTATGACCTTTGAAAAGCTTATGAAAAATATGAGACAG
TACCATACACGAGGTATAATCAATATTAATTTATATTTTCCCTACTCATG
GTGTATTATCTTATAGCTGGGTCCACATATGTTCCAAGAAGAAACTATAG
TGAGATGTCCACTGACGTTCCTACTTACACTAATATACCTCAAGTAAACA
GGCATTATATTAATGGCTTTCTCCCTTCATATTTGTATTTTTATAGGTTT
TTGACCGCATAAAAGAAGTTGCAAATTCCGAAACGATTCAAAAAGTGAAC
GCAGTCTATGTATTCGATGTTGAAGGAGAGGGTAAATATTTCGTTGATTT
GAAGAAGGAAAATGGATTGATTGGAAAAAGTAACATCAACGAAGATCCAG
ATGTTACGATTTCAATTAACCAGGAAAACTTTTTAAAATTATTTAATAGT
AAGTTGCATTTAATTTTATTTTGATTTATCTCTACTTTCACTTTATGTTT
CCTTACTTTTGTCTATAGGAGAATTAAAACCAGCCACTGCATTTATGACT
GGCAAGTTGAAACTTTCCGGGGATCTTTCAAAAGCTATGGCCTTAGAGGC
TGMTATGAAAGCCAGTCGTGCTGAATTTCATACATCTGCGTAAGTTGCAT
TATTGCCTTTTAGATTAGGGTGATCAATTGTCCTCTTATGGCCGGGCATG
TCCTTTTTTTCCATTTTGCCTGGGCTCGTGAAATGTCCAGTTTATAGGGT
TTTTTCCAAATTACCTTAAAACAAGTCAATTTTTAAAAATTGGGAAAGAT
CAAGGCCAATTATTTTTAATTATGAATAAAACCCAATTCAATATACATTA
ATCAACATTTACTGATCGGCCTACATGACCTTATGATCACTCATATTTTT
CATATTATGATAAGAAATAACATGCATTGATGTCCACTTTTGTATAGGTA
TATGCGAGGTCCAGTTTTCTCCTCCGTTCCTGAAATTTTTGAACGTATTG
GTAAAATTGCATCTGCGGAAGTGGTTGCAAAAGTAAAGGCAACCTACTGT
TTCAATGTCGAAGGTAACAATAGTTTTACATGTGTGTGGTCCGTGAACAC
AAAAGCATACGAGAATGATTTTTCTCGAAATTGAGTGTGGATTACATTTC
GTGGGGTTGGAGCCAAATTTTCGTTACTTAAATATTTACTTTACATAACT
AAGTTTGGAAACTATGTTTTTCACTATGAATAATGAGATTTTCTAATTTT
TAGAAAAAAATGAATCTGAGAAATTCCTTTGAACAGTTTGAAATTCTTTG
GTTTTGAAGTATTAACATATAACAATATTGGACTTCTAGATATTGGACAT
ATAGACAATAACACTAATATTTACCATTTTTGAGTTTCAACAATTTGGAC
CTCAGTCTGTATTCTTCCACGAATTATCGCCAATTTCTATCAAGAAATTA
TTATTACTAACCCCTTGGATGTGCTGCAAATTGCACTCTTACATAGACAT
CAAAATTTATCCTTATGACAAAAAATAAAAGTCATAAATTATAGATTTGA
TTTGAAAAAGGCCATATCGGGTTCTTTACTATAACTAAAATTCTTGGGTA
TCTTAATTCATCCCATTAATTTTAATAATAAGCCTATATTCGACTCTAAT
TTGTCTATAACATATTGAGCTGTAATTATATATGAACTAAAAAAATTAAT
TGGGGTTTTCTCCTTTTCTTTACTTTTATTTAAGATTGTTTTTATGTTGA
CGCACCACATGCTTTATTTCGAGGCCTATAATTATAGTATAATTAATCAT
TTTGTTTTTTTCGTATTAGATGAGGGAAAATACTACATTGATTTCAAATC
TGGAGACGGGCAAGTCGGCACAGGTGATCCCCCAAGTGGCAAACCTGATG
TTACCATCAAGATGAAGTCCAGCAATTTGCTCAAACTTTTTAACCGTAAG
TTGTTCCTTCCAGGGCCGGTTCAAGTATATTTTCTAGGTTACTACGCTTT
TTGTTGATATTTAGTTTAATGACGTTTTTTAAAAGAAATATTTTTATCTA
TTTCTGAAGTATTTTTTTATATAGATAAACTAGCGGTAGTACTCGGCATT
GCCCGGAGTTATTAAACGTCGATAAACATAAAAGTTTTGCTTTAATAATA
TAGAAGATAACATCCTAAGAAATTCTTGGTGTCGACCTCCGTTTTTGATG
AGCCATAGAGTACTTCAGCTCGCTGCTGTACCTCATCTAAACTCGCACTC
TTGTTTTTAAAATTTTATATAAAGTATTTCCTGCTTTTTTTTCTTCTTTT
TTTAACTGTATTGTAATATGAATTATGGAGCACTATACAATGCACCTGGT
GACATCTTTTCTACTTTGAAGTTGAATCAATGTTACAAATAAAGACTTTT
TCACGACAATTAGCAAGATTTTTTGTAAATAAACGCACAATTCAGTCAAA
TTGGTTCAACTCACTGAATACTTCTGAATACTTGATGGTCACATCATGAA
ATGCGTCAATTTCCTGAACGGAACATCCTTTTAGATCGAAGGAAGGAAAA
GTTTATGTTATTATAAATATCCCAAAGTGAAACTTTTTTTATAATATTTT
TTCAAAAGGCCTTCATTTAAATTTCTAGCAAAAGTTTCCGCCTCTCCTAA
TCTAATACTGCAGAGCTTGGCTCCTTCTAAGTCTGATATCTGTTTTTTTA
TTTTTAAAAAGGTGAATTGTCCCCTGCTTCCGCCTTCATGACTGGAAAAA
TCAATGTCTCTGGAGATTTGACAAAAGCCCTGACACTGGAAACAGTCATG
AAAGCAATTGCTGACAAAAAGAGTGAAGAAGCATCATAATCTGTGTAAGG
ATTCATCGTTAGGAGGAAGATTCAAARCCGTCKCTCCGCTGCCACAATTA
TTTTCTCTATTATAAACCTTATTTATTACTACTTTTATTATCCTAATTAT
TACTTACTACTACTTTTCCCGACCTTCTTTTAGTTTTTATCTCTTATATC
TGTGAAAAATGTAGTTTGAATGATTCTTTTATGGTTTCACGTACCTCTAT
GTAGTGTGACACACTTCAACCCTCTGTGTGTCTTTATTTTCTTAATTATC
TACGACTTTATAGTTTATTTATACATTCTGAGTAGAGGTTGAGTATGTGT
TAGCAATGTATGTATTATGTATATAAAAGGACTTGCATCATTTATCGAAA
ATTTTGTAGCCTTTGTTTTATCAAAGCAATCTTATTATCTATTGTAGAAG
GACTGATTAAATTTAATAGTAA

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