EMLSAT00000012196, EMLSAT00000012196-708043 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012196
Unique NameEMLSAT00000012196-708043
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s881supercontigLSalAtl2s881:209726..210574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012196 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012196EMLSAG00000012196-694962Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054683EMLSAE00000054683-763611Lepeophtheirus salmonisexon
EMLSAE00000054684EMLSAE00000054684-763612Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774573auto774573Lepeophtheirus salmonispolypeptide
EMLSAP00000012196EMLSAP00000012196Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012196

>EMLSAP00000012196 ID=EMLSAP00000012196|Name=EMLSAP00000012196|organism=Lepeophtheirus salmonis|type=polypeptide|length=117bp
MNAPPTFESFLLFDGEKKITKEQDTKVPNASIFTINKEDHTLGNLVRHQL
LKDPNVLFTGYKNPHPLENKIILRIQTTSDYTPLDALMNAITDLISELSL
FEESFKDAVREKADRFD
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mRNA from alignment at LSalAtl2s881:209726..210574+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012196-708043 ID=EMLSAT00000012196-708043|Name=EMLSAT00000012196|organism=Lepeophtheirus salmonis|type=mRNA|length=849bp|location=Sequence derived from alignment at LSalAtl2s881:209726..210574+ (Lepeophtheirus salmonis)
TATGCGTCCTATGTGTGGCTATATTCAAGGAAGACTAGAAACACTTGTCT
TCATTGCTATATTGCTAAAAAGGGGATAGGAGAAGGCATCTGAATTTTTT
TATCATAAAACTTATGACGTCATGAATTAATATTACACAATAATAATTAA
ATCTAGTGACTTTCAAATTGAAATAAATTATGAATGCGCCTCCGACCTTC
GAATCCTTTTTACTCTTTGACGGAGAGAAAAAGATTACAAAAGAGCAGGA
TACAAAAGTTCCTAATGCCTCCATTTTTACAATAAATAAAGAAGATCATA
CCTTAGGTAACTTGGTTCGTCATCAATTACTCAAGGATCCCAATGTTCTT
TTCACCGGCTATAAGAATCCTCATCCACTCGAGAATAAGATCATTCTCCG
AATCCAGGTTTTGTTCATGTGTGCAGTAGTATGATGCCTTTCCATTTACA
AGTATATTTATTTGCAGACTACATCGGACTATACTCCTTTAGATGCTTTG
ATGAACGCAATCACGGATTTAATATCAGAGTTATCCTTATTTGAGGAGAG
CTTTAAAGATGCCGTTCGGGAAAAGGCGGATCGTTTTGACTAATCTACTT
CAATTATCTTTTTTGTCTATTAATATATTTTGTGAAGGACTTTGATATTA
TATAATATAAAGCACTAATTCGTGGATTTTCATACTAATACGATTTGCAG
AGTTTTAAAATCATTTAAAAGTTAATTTATAATCCATCCAATATAATGGC
GGCAAGTCTATAATAGAGGGTTTTCTCGTGACAGCTATTTTGAAAGATGC
ATATTAAGGAAAATAGTCGACTATTAGATGTCAAATTAGGAATAAAAGA
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