EMLSAT00000012201, EMLSAT00000012201-708048 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000012201
Unique Name	EMLSAT00000012201-708048
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s883	supercontig	LSalAtl2s883:200297..205470 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000012201 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000012201	EMLSAG00000012201-694967	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000054701	EMLSAE00000054701-763629	Lepeophtheirus salmonis	exon
EMLSAE00000054702	EMLSAE00000054702-763630	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774381	auto774381	Lepeophtheirus salmonis	polypeptide
EMLSAP00000012201	EMLSAP00000012201	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s883:200297..205470+

protein sequence of EMLSAP00000012201

>EMLSAP00000012201 ID=EMLSAP00000012201|Name=EMLSAP00000012201|organism=Lepeophtheirus salmonis|type=polypeptide|length=206bp
MMIFEWEYYNQIWDVRDKRADHLPLLGICQNVDRNPDPNGSGMLMLMTCY
YFYLSKILDFVDTIFFVIRKKNNQITNLHVIRHAIMPIYTWIAVRWIPGG
QETFVTLINAFCHVLMYTYYFLSTLGPKVKPFLWWKKYLTSLQMLQFILI
GIKSTLVVSGVVSCGYPWQWSLVTLILVIMFYHLFNEFYKSAYYANKEKQ
NGLKSN

mRNA from alignment at LSalAtl2s883:200297..205470+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000012201-708048 ID=EMLSAT00000012201-708048|Name=EMLSAT00000012201|organism=Lepeophtheirus salmonis|type=mRNA|length=5174bp|location=Sequence derived from alignment at LSalAtl2s883:200297..205470+ (Lepeophtheirus salmonis)
ATGATGATATTTGAATGGGAATACTACAATCAAATATGGGATGTCCGGGA
TAAAAGAGCGGATCATCTACCTCTTTTGGGAAGTATCTGGCCAACTTTGC
TTCTCTGTTTTGCTTATATCTATTTTTCCAAAGTATGGGGTCCATATTAT
ATGAAAAATTGACAAGCAATAGATTGTAAAGTTTTAATGAACCTGTACAA
TACGGTTCAAGTCGTCTCATGTATGATAATGTGGATCAATACATGGAGAG
GTGGATGGTTTAAGGAGTACGATTGGTGTAAGTTTAGTTTCTTAAAATTT
GTTAAATTGTAGGCCAGTGTTATGGTGTGGATCAGAGCTACAATAAGAAT
TTTTAAATTTAGGGATTTAGTGTGCCCTTACATAAATGATGTCAAATCTG
GGGGAACATTCTGGGTTTACAGAAAATCTTAAGGGGGAAGAGTCTATACA
GCAGGTTTTACCGTAGGCAGGGGACAGGGCAAAGATAAATATGCAGGCCC
GTTTCTTTTTTTATCATTTGTATTTATTTTCTATATTTTTTAATGACCTT
TTTAAAAAAGATTTATTAATTTACAAACAAATCTATAATTTGTGGGCCCT
TATTCTACGGGTAAATGACTCAAATATCCTTCCCCTCCTAAAACCGTATT
CCTCCTCTAATGGGACTCATGGTATAGATCAGGGTTTTCCAAACTTTTTC
ATGCTGGGGCCCCCTTGCCTTCCAAATAAACTTGTAGCGCCCCCTCCCAT
AGACATTTTTTTTTGGGGGGGGGGGGGCTTGATTATTTCTCACACATCGA
ATGACCTTTTTTTTTAAGAAATCCTATAAATTTTTTTTTACTATAAAAAT
TCTCTTAATTACATATTATTCTTTTTTTTTAAATCCATTGAATTTTCATT
TCTTATTATTGATTTTTTTTTTTTTATTCCCCGATTTTCCGCTTCAGCTA
CCCCCCTGCGGACGCCCCTGCACATATAACCTTTTCTTCAAAAATTAAAA
CTACAAATTTATGAATTAAACACCAAATATATATATTTTTTCTAAATTAT
CTTTAGTTTTTCACAATTCCTTGTAATGGGATGGGTGTACTTGGTGTAAG
GATATTAGTTTATCCACATCAGGTTGAAACTCACTAAGAGGAAGACGTAG
ATCTCCACGTTCGGTAATTTTAAGTTTGTTCCTTTGTTTAGAAAGAAACA
TAGTAACTACACTGAAGGCCCGTTCTACCAGATATGACGTTGGAAAAGCA
ATCAAATATATCTTGACCTTGTTCCATAATACTGGATAGAGGTCAGAAAT
TTTTTTTATAGCCAAAAATCTTGATAGGATATCTTGAACTTTGGACTTAG
CTCTATGTCGTTTTTGATTGAAACAAATTCTTCTTCTACCTCTCTTGTTT
CCTCACTACTGACTTCTAGTAATGGATTGATAACCCAGTCTGGTATTTTT
AGCCCTAATATATCCTGATATCTTTCAGTCATGTCTCTTTGCAACTCTTC
TATATGAGCACAATACACTTGAAGGTCATCATCAGATATTTTCTTTTCTT
TATCCAATTCACAAAGGCTTGGAAATTGGTAAAGTTCATGACGTGCTAAA
TTTCGTTTGAATAATTTACACTTAGACAGGAAAGTGGATATAACAGATTT
GACTTTTATAAGATTGGCATCATTTCCTTGCAATTGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNACGCAAGCCGTCAGTGGATTGTTCTGAAGYGCTCGA
AAACATATTTTTAATMGTTTTTTGTGCCTTGAATTTTTCTCGAAGCGACT
GGAAATATGCTATATTTTTTTCTGTTTTATCAGAGTGCATTGTTCTCAAA
TGTTCCGAAAGTCTGGAGGGTTTCATGGCTTCGTTTGAAAACACTTTCTC
ACACAGCAGACACATAGGTCGATGTTGATTCAGTGGTGCTGATACAAATC
CATATTTCAAATATTCTACGCTATACTGCCTACACTTCTTTTTTGCTTGT
TGATGGGTTGCCATTCTTTATTCTGGAAAAATATATAAGATACGACTATA
ACTATTGTCATTTAGGGTTGGAAATGGGTGAAAAAATTTAGAAAGTTTTT
ACGTAAACATCGCTTCGGGAATTTTCAAATGAGTAAGTTATGTGAGTTTG
AAATGTTGCTGAAGTAAGAGATGGATAAATCTCAAGGTCTTATGGTCCAA
ATAATTGAGAAATAAATATATTGAGACAAGTTATTTTTGATGGCAGTTTA
GTATTGAGCAAAACAATATCCAAAAAGGAAGAAAAAAATAACTCTCTACT
GGTTAATACTGTAACTGTATTTTCCTGTCTAACTATTCTCAACTACAACC
ATGTGTTTAACAGCAGAAATGTAGATCAATATTTGTCTATGGTCCAAATA
GTTAAAGAAATAAAAGCTAATTGATGTAAAAAAAAATCTTAATACAGTTT
TATAATTACTTGACGTCCTTGCTTGAAGTTTTAGAATGTGGAATTTGGGT
TGTAGTTTTTGGATCTTACTTTTCCGTAGTTTCACGTTTTTAACCAAATT
ATAAGTATTTATTTTAAGTAGTCTGTTTGCATTTGAGAGTAAAAGTAAAC
TGAGTATAGAGCAAAATATATAGGCGCCAACAATGTACATTTGTACAATC
TCGATATAACGTATTTTCGTCGTATTAACCGGATAATATTCAAGATATTC
ATTCCTGCTATTTTGTAGTCATATTTCTTTATTTTTGTAGATCAATTTGT
TTGTTTTATGTAATAATATGTAATCACCGTTTTTTGTTTGTTTTTTTGCT
CTACCGCCCCCCAATCACCCCTTTTCCCATTACCGCCCCCTAGATCAAAG
CACCACCCCCAAGGGGGCGGTATCGCCCACTTTGGGAAATGCTGGTATAG
ATAGTTAAAATATGCAATGAGGAAGCAAATTTATGTCCTGATTCTAATAT
AAAATTATGTGTTAAACTTTAGGCTTTTGAACCAGAAGCAACTTGTACAA
GCAGATCGTACAGGTTGCAATTTGTACATCTCATAACTTCATTTTGAATT
TTAACAATATCCATTTTAATTATAGACTAGTAATTTCTCATTATAACTTC
GCATTTCACATATATTTGTATGCACATTTACGAGTGATGGAACTATGGAC
CAATAAAGTATGTACCCCAGAATACTAATCAATTTATAATGTTTATCGAA
AATTACTCCATTAACTTTTTGAAAATACAATTGAATTTCATTTATGGCAT
TCAAGGCTAGTTTTACGGTGAGCGGAGCCAAGGGAAAAGATAAATGTACA
GGNACCTTATTTCTTAAATGTTGAACTTTGTAGTATCATGCAACCTTCCA
TACGAAAAGACAAAGATAAAAAAGGCCCAAAATCAATTCTTAATCAGCCA
ATTCTGGACCATTTCTTCCAATAATGTAACTATTATTTAATAATGAAACG
GAAGTATCCACAGCTTAACAAAAGCTAATTCTAATTCAACCAATCAACGT
TTAGGACACTGATTAGGGGGAAAGAAGCAAAAATATCGGCAGSTGACAAC
AATATACACTGTATATTTTGTGCTAGTGAGGTCACACTGTGTTTAATTTA
ATTTCGAGTTCATTTTTTATAGAAAATAAACTTCAAATCCGTTTTTTGTA
AGAAAGTAATTTCGAATCTCTATTATTTTAGGAAATAAACTGAAGAGTAC
CTTTTTATTGTTGAGGTGACATTTTAATGAAAAAATATATTCAGTAGAAT
TTTGAGATTGATGACGTTTTTAAGTGAAGATATATAACAATTTCTTTTCA
TATAATTTTTTATCAAACAAAAAGTTTATATTCTATTTCCTTAAAAAAAT
ATAACCTGTCTGGCCGCTATTTTTGATAACCAAGCTTGAGGCTAGGGCAA
GTACTCCAAACGCCCTCTCCCTCTAAAAAAGGTCCTGATTTCATTATAAT
TTTGATAAGCACCAGGGCTGACCAAGTTTTGGCAGGGGTGTCATCAGGAT
TGTATTTTCGTTTTTTTGTTTTTTTTTAATTTAAAGTTATTACTTTTGCA
CCGTGTCTGAAATCATTTTATATTATTCCTACGAAGTGATTATTTTTGTA
TGATAGACACAAAATTTCTTGATTGGAGGGGGGTACTATAGCCCCCCCCC
CCTTCGGACGCTACTATTTAGGATCTCACTGATGAGCTACAAATTTGTAT
GTTTTGCTATTTATCCCCTGGCAGGCCCTACAAATCTTCTCAGCTGACGG
GGCCTACTATTAGGGTCAAGCTGCCTTGATTGTGCTATTTGATTGTACAA
GTGTTAAATCCATTATAAAATCCAATATTTTACACAATTTATTATGTATG
AATAATACTTATAATAACCTATAAATATTTTGCAGTATGCCAAAATGTTG
ACCGAAATCCAGATCCAAATGGTTCTGGAATGCTAATGCTTATGACTTGT
TATTATTTTTACCTCAGCAAAATCCTGGACTTTGTCGACACGATATTCTT
TGTCATACGCAAGAAAAATAATCAAATCACAAATCTCCATGTGATTCGTC
ATGCAATTATGCCTATTTACACATGGATAGCAGTTCGGTGGATTCCTGGT
GGTCAGGAAACTTTTGTTACTCTTATCAACGCCTTTTGTCACGTCCTGAT
GTATACCTATTACTTCCTCTCAACTCTAGGACCAAAAGTCAAGCCTTTTC
TTTGGTGGAAAAAGTATCTCACGTCACTTCAAATGCTCCAATTCATACTC
ATAGGCATTAAATCTACTTTAGTCGTATCTGGAGTAGTAAGCTGTGGTTA
TCCTTGGCAGTGGTCCCTAGTCACTCTGATTCTTGTTATTATGTTCTATC
ATTTATTCAATGAGTTTTATAAGTCTGCTTACTATGCTAACAAGGAAAAG
CAAAATGGCTTAAAATCCAACTAA

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