EMLSAT00000012209, EMLSAT00000012209-708056 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012209
Unique NameEMLSAT00000012209-708056
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s8853supercontigLSalAtl2s8853:989..1792 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012209 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012209EMLSAG00000012209-694975Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054753EMLSAE00000054753-763681Lepeophtheirus salmonisexon
EMLSAE00000054754EMLSAE00000054754-763682Lepeophtheirus salmonisexon
EMLSAE00000054755EMLSAE00000054755-763683Lepeophtheirus salmonisexon
EMLSAE00000054756EMLSAE00000054756-763684Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768070auto768070Lepeophtheirus salmonispolypeptide
EMLSAP00000012209EMLSAP00000012209Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012209

>EMLSAP00000012209 ID=EMLSAP00000012209|Name=EMLSAP00000012209|organism=Lepeophtheirus salmonis|type=polypeptide|length=144bp
METNRVLILHLLSFCLFHQCFGILSNTTCEDTDEPYCHSSIGSSKESCFD
AAFQYTCPKSCGICDECEDLISIEFCESIKNRCNTDASVRYSCRKTCDLC
KSNCNNAYYDDTVCEEYQARETCDDELRSTKMKEMCKKTCNVRK
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mRNA from alignment at LSalAtl2s8853:989..1792-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012209-708056 ID=EMLSAT00000012209-708056|Name=EMLSAT00000012209|organism=Lepeophtheirus salmonis|type=mRNA|length=804bp|location=Sequence derived from alignment at LSalAtl2s8853:989..1792- (Lepeophtheirus salmonis)
AGCCATGGAAACAAACCGAGTACTGATCCTACATTTATTGAGCTTCTGTT
TATTTCATCAATGTTTTGGAATTTTGTCGAGTAATTAGAAGAACTTTTGT
ACATCTTGGAGTTTACAATCTAATATTCTTTTATCTTTTAGACACTACCT
GTGAAGATACCGATGAACCCTACTGTCATTCATCAATAGGTTCTAGCAAA
GAATCTTGCTTCGACGCTGCGTTTCAGTACACTTGCCCTAAATCTTGTGG
TATTTGTGATGGTAAAATATAAAATACATATTCATCTATAGCTGCATTCT
TATGATTAATATCATGTATCCTTCCRTTCACTTAGCTAAATGTAGAGATA
ATAACGGTGCTTGCTATAGAGATTCTATAGAGGAATGCTTTGARCCTCAA
ATTGCAAATGAATGTCCGAAATCGTGTGNCTGAAATCGTGTGCCGGATGT
GATGGTTAGTATCAAAGTTGTTTGTTGTATATCCATTCACTAATTAAATT
ATTTTATAAATAGAATGCGAGGACCTGATTTCTATTGAATTTTGTGAATC
GATTAAAAATCGATGCAACACGGATGCTTCAGTTCGATATTCTTGTAGAA
AAACCTGCGACTTATGCAGTAAGATTATTACTTATTATTATCTTACCATA
TAACTTATGCATTTGAATTATAGAGAGTAATTGTAATAATGCATATTATG
ATGACACCGTTTGTGAAGAATACCAAGCTAGAGAAACCTGTGATGATGAA
CTTCGTTCAACAAAAATGAAAGAAATGTGCAAGAAAACGTGTAATGTTCG
TAAA
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