EMLSAT00000012244, EMLSAT00000012244-708091 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012244
Unique NameEMLSAT00000012244-708091
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s8920supercontigLSalAtl2s8920:373..1847 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012244 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012244EMLSAG00000012244-695010Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054929EMLSAE00000054929-763857Lepeophtheirus salmonisexon
EMLSAE00000054930EMLSAE00000054930-763858Lepeophtheirus salmonisexon
EMLSAE00000054931EMLSAE00000054931-763859Lepeophtheirus salmonisexon
EMLSAE00000054932EMLSAE00000054932-763860Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767904auto767904Lepeophtheirus salmonispolypeptide
EMLSAP00000012244EMLSAP00000012244Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012244

>EMLSAP00000012244 ID=EMLSAP00000012244|Name=EMLSAP00000012244|organism=Lepeophtheirus salmonis|type=polypeptide|length=381bp
MVYKKGDEILRCKPFSYGVKEEHRDKICDFCFSSGQAKISRCSRCCVIYY
CGKQCQRSSWKEIHKHECKYLKILDLQEPHITLLLIIRTLCKLRYDGGYS
KKVSLPNGRSRRFGDLMSHKENVLMDPKLNKMFFVFLTMIRNKLDHSCRP
NALYMFIGRTLVVQALCDIANFEDVRVGYIDTTKPRFNRQILLKNKYFFD
CNCEECTEDPLNLEKLKSHSPCCPECQNLVDGNKCMNCNKEVDLSRYYQI
KXILIKEEEVNVKTCLLFKEVFQYFHPFDYVAFNYCHELVRYDYLLTQNE
LQILHERIILAMRKYVYAYDILMPKYLINLMDVLISMNELKSLPSLLLET
KTIMDVIYPKSHSMFEELNVVRLMFEMANDK
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mRNA from alignment at LSalAtl2s8920:373..1847+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012244-708091 ID=EMLSAT00000012244-708091|Name=EMLSAT00000012244|organism=Lepeophtheirus salmonis|type=mRNA|length=1475bp|location=Sequence derived from alignment at LSalAtl2s8920:373..1847+ (Lepeophtheirus salmonis)
GCTGAAAGTTGATCAGGATAAAAAAAATAGAATATTAATATTATTGGATC
GAATAAAAAGACGACCGAAGGATCATGGTGTATAAGAAGGGGGACGAAAT
CTTGAGATGTAAACCCTTCTCATATGGGGTTAAAGAGGAACATCGTGATA
AAATATGTGACTTTTGCTTTTCAAGTGGACAAGCAAAAATTTCGAGATGT
TCCAGGTGTTGCGTCATATATTATTGTGGAAAACAGTGCCAAAGATCCTC
TTGGAAGGAAATTCATAAACACGAATGTAAATACTTGAAAATCTTAGATT
TACAAGAGCCTCATATTACTTTGCTTTTAATTATTCGAACACTCTGTAAG
CTTCGATATGATGGTGGATATTCAAAGAAAGGTAATAGAAAACTGAAAAT
TTTAACAAATATTTATTCAAGTGCAAAAAATATAATTTCACTCAATTTTG
AAAAATTTAGTTTCTTTGCCCAATGGCCGTTCAAGAAGATTTGGTGACCT
AATGTCTCACAAGGAAAATGTTCTAATGGATCCAAAGCTTAACAAAATGT
TTTTTGTGTTTTTAACAATGATTAGAAATAAGCTTGGTGGAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAAATTCYGCYTYTA
TACTAAATGGAGAGTTGTTAAACGTTGGAACATGTYTATCRTTAGAATTT
TCTTCCATAGATCACTCATGTAGACCAAATGCACTCTATATGTTTATTGG
TCGTACATTAGTTGTTCAAGCTCTGTGTGATATTGCTAACTTCGAGGATG
TAAGAGTAGGTTATATAGATACCACTAAGCCACGGTTCAATAGGCAAATT
TTGCTAAAAAATAAATATTTTTTTGATTGTAACTGCGAAGAATGTACTGA
AGATCCATTGAATCTTGAAAAGTTGAAATCACATAGTCCATGCTGTCCTG
AATGCCAAAATTTAGTTGATGGAAATAAATGCATGAACTGTAACAAGGTA
AAATTATCATAGAATTTAAAATATTTAAAAGCATTCATTTTTATTCTAGG
AGGTTGATTTGTCTAGATATTATCAAATAAAAKAAATTTTGATAAAGGAA
GAAGAAGTCAATGTGAAAACTTGTTTGTTATTTAAAGAAGTGTTTCAGTA
TTTTCATCCCTTTGACTACGTAGCTTTCAATTATTGCCATGAACTGGTAC
GTTATGATTACTTACTCACGCAAAATGAATTACAAATTTTGCATGAAAGG
ATTATTTTGGCAATGAGGAAGTACGTTTATGCCTATGATATATTAATGCC
AAAATATTTGATAAATCTTATGGATGTACTTATTTCTATGAATGAATTAA
AATCGTTACCTAGCTTATTATTAGAAACTAAGACAATAATGGATGTTATA
TACCCAAAAAGTCATTCCATGTTTGAGGAATTAAATGTTGTACGTCTCAT
GTTCGAAATGGCTAATGATAAATAA
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