EMLSAT00000012265, EMLSAT00000012265-708112 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000012265
Unique Name	EMLSAT00000012265-708112
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s895	supercontig	LSalAtl2s895:95187..102360 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000012265 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000012265	EMLSAG00000012265-695031	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000055046	EMLSAE00000055046-763974	Lepeophtheirus salmonis	exon
EMLSAE00000055047	EMLSAE00000055047-763975	Lepeophtheirus salmonis	exon
EMLSAE00000055048	EMLSAE00000055048-763976	Lepeophtheirus salmonis	exon
EMLSAE00000055049	EMLSAE00000055049-763977	Lepeophtheirus salmonis	exon
EMLSAE00000055050	EMLSAE00000055050-763978	Lepeophtheirus salmonis	exon
EMLSAE00000055051	EMLSAE00000055051-763979	Lepeophtheirus salmonis	exon
EMLSAE00000055052	EMLSAE00000055052-763980	Lepeophtheirus salmonis	exon
EMLSAE00000055053	EMLSAE00000055053-763981	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto771997	auto771997	Lepeophtheirus salmonis	polypeptide
EMLSAP00000012265	EMLSAP00000012265	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s895:95187..102360-

protein sequence of EMLSAP00000012265

>EMLSAP00000012265 ID=EMLSAP00000012265|Name=EMLSAP00000012265|organism=Lepeophtheirus salmonis|type=polypeptide|length=2231bp
MVLHNSGRYMKESSSKEDENKTDYRLRESKENDAIDSKYGFVRISEYTER
VGFLMNMHSTEILDDDKXLIAAVDYYFIEEDGTRFKVSVSFKPYFYVKVR
NGLLQETTAFLSKKYGGVISSIEQVRKENLDLANHLVGLQEKYIKLSFAT
VSDLQKVRKDVLATVRRNKRNGQKSVYAMEDNRSSSNNFDNIEDIREHDI
PFHVRVSIDKSIYVGCWYSVKVKGTKEDPIIIKREDLIERPDAIVLAFDI
ETTKLPLKFPDANVDQIMMISYMIDGQGYLITNREIISEDVEDFEYTPKP
EYEGPFIVFNEPNEMSLIQKWFDHILDVKPHIFVTYNGDFFDWPXIEARA
TIHGMDMANEIGFSKNREGVFSSRPAAHMDAFCWVKRDSYLPVGSQNLKA
VTKAKLRYDPVEVDPENMVRMANEQPQELSNYSVSDAVSTYYLYMKYVHP
FCYALCTIIPMEPDEVLRKGSGTLCEALLCVEAFKVNIVFPNKHETILNK
MTDDGHILDSETYVGGHVEAIESGVFRADIPCRFRMVPDAFQTLIDDVER
CMRRAIEVEEGVPLNHVENFEDIINEIKKKLVDLRDTPVRLENPIIYHLD
VGAMXPNIILTNRLQPSSVVDEADCAACDFNKPGATCQRRMPWMWRGEVM
PASRSEFQRIQQQLEMEKFPPLFPGGNQRAFHELNKEERATYEKKRLSEY
CRKAYKKTHITKMEECYTTICQKENSFYVDTVRAFRDRRYTYKGLCKVAK
KEVSEAVVSGDATLIKSAKNKEVLYDSLQLAHKCILNSFYGYVMRKGARW
YSMEMAGIVCYAGAGXIKCARELVEQIGRPLELDTDGIWCVLPASFPENF
TFKTNNSSPKKKNVTVSYPGAVLNIMVQDNNTNEQYHELINAEKLEYKQT
KENTIFFEVDGPYLSMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVK
RRGELQIIKIFQSTVFEAFLKGNSLQSCYDSVAKVADFWLDVLYSQGVNM
PDQELFDLISENKSMSKTLAEYEGQKSTSISTAKRLAEFLGDSMVKDAGL
SCRFIISKKPEGAPVTERAIPLAIFDAEPSVKKHYLRKWLKDNSMSNFDI
RKILDWNYYIERLGGTIQKIITIPAALQGISNPVPRISHPDWLHKKIMEK
SDVFKQRKINQMFTVQSKKVMDEIPMDVNERDIFDIEDMDKPVSRPLALK
NLTITNKRKRFSDNTSKDVEDLTKNWQEVLGNPPNRSNVKDWINFHKKKW
AYQAKQRVAGMHGKNKKVKAGQVLSNAGSTIGAFLRKTQKSLLDSIWQII
HIVETGNPGLFRLWALIGNDLHQIKLIIPRIFYVNQRITKXDDSKENTMR
RRIQKTLPRSHPSMNLYEYSVPEHLFREHSSDLVTDLSTPDVEGIYETQI
PLEFRVLVELDTFELGWLNFKTLAHNDYLADNNYKAIYFYYHKVGNKAIY
GVFIPVSKKAHVFVSDTVRSNQLPNLNLLYNAERTAVMQNETLKDVPESD
YNFEVRIETDVRQINRQITKILQGYRDEKRGPTIILAQSIADFQMLSSVI
PTFVEFPIVPLHVSDHDNLYNVLDWQRVGARHMIRHFFKSNAYFMATLEQ
CRYFHVPIGNIPKDNTAFGADLFYARHLKKQNFVLWCSPTEKPDLGGKEA
DDSRLLTEAEDSCLMTTVNNPGAYRTVCVEIEIDALAVSALLQAHNIHDM
EGTSGSIAFDTMPQASLEEMLGGTASNLCSYDETALVSGAFRVLRTMVHV
WLKEVTQYRNVFADYQIIHFYRWLRSPNSLLYDPALRKTLQNLMKKMFMQ
LVAEFKRLGAIVIFGDFNRLIICTKKRNFKDALAYVEYVTNTIHEKEIFN
SIDMKFTKAWDYLLWCDPSNYGGVKSLSPRNLTEKELDVQDEEDTEEGFV
EKDFNEDDDEPELDMSWNIASYXPDAGACHKNFNTVIAGFISSMYQFMVS
EAERVAPGCTPVRRKFNPSQSQPTPRRKNNSKSQGSVEENITDIDSFAQD
LVSGELAQRLYSVTQKIHKKLPEHKGNDTYNVFPVLPGSHLKLTNPALEF
VKALVKVLSLDYSITDHVHKLRRDLLKLIGIGEFSVAAEWKDPCISFVLP
EVICKQCNHCRDIDLCKDPHRGEQNGIPVWLCPSIQCETPYDTYELEALL
LDVVRRKTMGWVLQDLKCIKCSGIKEANMTKYCLCAGAFETISRFHDLQQ
LLMTFKSIAEHYNMPMLEELVTWTLEMNINT

mRNA from alignment at LSalAtl2s895:95187..102360-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000012265-708112 ID=EMLSAT00000012265-708112|Name=EMLSAT00000012265|organism=Lepeophtheirus salmonis|type=mRNA|length=7174bp|location=Sequence derived from alignment at LSalAtl2s895:95187..102360- (Lepeophtheirus salmonis)
ATCATGGTTCTTCATAACTCTGGTCGCTACATGAAAGAATCATCTTCGAA
AGAGGACGAGAATAAGACAGACTACCGTCTACGGGAGTCCAAAGAGAATG
ATGCCATTGATTCAAAATATGGATTCGTTCGGATAAGTGAATACACCGAA
AGAGTCGGATTCCTTATGAATATGCACTCCACTGAGATTTTGGATGACGA
TAAARGATTGATTGCTGCTGTTGACTATTATTTTATTGAAGAGGATGGAA
CTCGATTCAAAGTTTCTGTGTCTTTTAAGCCTTATTTTTATGTCAAAGTT
CGAAATGTAATGACTAACGTGATACGTGAAATGACCCTCATTTGACATTT
ATTATTTGATCTGTTATATTTATAGGGTTTATTGCAAGAAACGACAGCTT
TCTTAAGTAAGAAGTACGGTGGAGTCATTTCCTCCATTGAACAAGTCAGG
AAAGAGAATCTAGATCTTGCAAATCATCTTGTGGGTCTTCAAGAAAAGTA
TATTAAACTCAGTTTTGCAACAGTATCTGATCTTCAAAAGGTGCGTAAGG
ATGTTCTTGCAACTGTAAGACGAAATAAAAGAAATGGTCAGAAATCAGTC
TATGCAATGGAAGACAATAGATCTTCCTCTAACAACTTCGATAACATTGA
AGATATTCGGGAACATGATATTCCATTTCATGTTAGGGTATCTATCGACA
AATCTATATATGTTGGATGTTGGTATTCGGTGAAAGTGAAGGGAACAAAG
GAAGACCCCATCATTATCAAGAGGGAGGATCTGATTGAAAGACCGGACGC
CATTGTTCTAGCCTTTGATATTGAGACGACTAAACTTCCTCTTAAATTTC
CGGATGCTAATGTGGATCAAATCATGATGATATCATATATGATAGACGGT
CAAGGCTATCTTATAACCAATAGAGAAATAATATCTGAAGACGTTGAAGA
TTTTGAGTACACGCCAAAACCCGAGTACGAAGGTCCATTCATTGTATTTA
ATGAACCCAACGAAATGTCTTTAATACAAAAATGGTTCGATCATATTCTC
GATGTGAAGCCACATATATTTGTAACGTATAATGGAGATTTTTTCGATTG
GCCGMTCATTGAAGCTCGAGCAACAATTCACGGTATGGATATGGCTAATG
AAATTGGATTTTCTAAAAATCGCGAAGGTGTATTCTCGTCTCGACCTGCA
GCTCATATGGATGCATTTTGTTGGGTCAAAAGAGATTCTTATTTACCTGT
TGGATCTCAAAATTTGAAAGCTGTTACCAAAGCAAAGCTTAGATATGATC
CTGTTGAGGTAGATCCAGAGAACATGGTCAGAATGGCTAATGAGCAACCC
CAAGAATTGTCAAACTATTCAGTTTCTGATGCCGTTTCTACTTACTATTT
ATATATGAAGTACGTTCATCCGTTTTGTTATGCACTTTGCACCATTATTC
CAATGGAGCCGGATGAGGTAAGCAGTAATTCTACAAACTATTATCTCATT
ATGCTTAATTTATTTCAGGTTTTAAGAAAAGGATCTGGAACATTGTGTGA
GGCCCTACTCTGCGTTGAGGCTTTTAAAGTCAATATTGTATTCCCAAACA
AACATGAAACGATATTAAATAAAATGACTGATGATGGTCATATATTAGAC
TCAGAGACGTACGTAGGTGGCCACGTCGAAGCGATAGAATCTGGAGTATT
TAGAGCTGACATTCCTTGTCGATTTCGTATGGTTCCTGATGCCTTCCAAA
CACTAATCGATGATGTAGAAAGGTGTATGAGACGTGCGATTGAAGTTGAA
GAAGGTGTTCCTTTGAATCATGTCGAAAACTTTGAAGACATAATCAATGA
AATTAAAAAAAAGCTTGTTGACCTGCGAGATACCCCTGTTCGATTGGAGA
ATCCAATTATCTATCACTTAGATGTGGGTGCCATGTKCCCTAACATTATC
CTCACCAATCGTTTGCAGCCATCATCGGTTGTCGATGAAGCTGATTGCGC
TGCTTGTGATTTCAACAAACCAGGAGCTACATGCCAAAGACGTATGCCCT
GGATGTGGAGAGGAGAAGTTATGCCAGCATCGCGCTCTGAATTTCAAAGA
ATTCAACAACAACTAGAAATGGAAAAATTCCCTCCACTATTTCCTGGAGG
GAACCAAAGAGCTTTCCATGAGTTAAACAAAGAAGAAAGAGCTACTTATG
AGAAGAAAAGACTCTCGGAATATTGTCGTAAGGCTTACAAAAAAACTCAT
ATAACAAAAATGGAAGAATGCTACACTACTATCTGTCAAAAGGAAAATAG
TTTTTACGTTGATACTGTGCGAGCGTTTCGTGATCGTCGTTATACATATA
AAGGATTGTGCAAGGTTGCTAAAAAAGAAGTTTCTGAGGCAGTGGTATCA
GGAGATGCAACTCTAATTAAGTCTGCAAAAAATAAAGAAGTTCTTTATGA
CTCTCTTCAGCTGGCACATAAATGTATTTTAAATTCCTTTTATGGTTATG
TCATGCGAAAAGGAGCTCGTTGGTACTCCATGGAAATGGCTGGMATTGTT
TGCTACGCTGGYGCTGGGYTTATCAAATGCGCTAGGGAACTTGTTGAACA
AATTGGAAGGCCACTTGAGCTCGACACAGATGGAATATGGTGTGTATTAC
CTGCTTCTTTTCCAGAAAATTTTACATTTAAGACCAATAATTCGAGTCCT
AAGAAAAAAAATGTTACTGTATCATATCCTGGCGCGGTTTTAAATATTAT
GGTACAAGACAATAATACTAATGAACAGTATCATGAACTAATAAATGCTG
AAAAATTAGAATACAAGCAAACGAAGGAGAATACTATATTTTTCGAAGTT
GATGGACCGTATTTATCTATGATACTCCCAGCTTCGAAAGAAGAAGGAAA
GAAGCTGAAGAAACGTTATGCCGTGTTTAATTTTGATGGTTCACTTGCAG
AGTTAAAAGGATTTGAAGTTAAACGTCGAGGAGAACTACAAATTATTAAA
ATATTTCAGTCCACAGTTTTTGAGGCTTTTCTCAAAGGAAATTCGCTTCA
AAGTTGCTATGATTCCGTTGCTAAAGTAGCAGATTTTTGGCTTGATGTTC
TTTATAGCCAAGGTGTTAATATGCCTGACCAAGAGTTGTTTGATCTTATA
TCTGAAAACAAATCGATGTCCAAGACTTTGGCTGAATATGAAGGCCAGAA
ATCGACTTCAATTAGCACTGCTAAAAGACTGGCTGAATTTTTAGGTGATA
GCATGGTTAAAGATGCTGGTCTAAGTTGTAGATTCATAATTAGTAAAAAG
CCTGAGGGTGCTCCAGTGACTGAGCGGGCCATACCATTAGCAATTTTTGA
TGCTGAACCATCTGTTAAGAAACATTATTTAAGGAAATGGCTTAAAGACA
ATTCAATGTCGAATTTTGATATCCGTAAAATACTTGATTGGAACTATTAT
ATAGAGCGCTTGGGCGGCACAATTCAAAAAATTATTACAATTCCTGCAGC
ATTACAAGTAATATAGACTTTTACTATTCTGATGTTTGAGTAAAATCTTT
TTTCCACACGTAGGGAATTTCCAATCCGGTTCCTCGAATATCGCATCCAG
ATTGGTTACATAAGAAGATTATGGAAAAGTCTGATGTTTTTAAACAAAGA
AAAATAAACCAAATGTTTACTGTACAGTCTAAAAAAGTGATGGATGAAAT
ACCAATGGATGTGAATGAACGGGATATTTTCGATATTGAAGACATGGATA
AGCCTGTTAGCAGACCACTTGCTTTGAAGAATTTGACAATAACAAATAAA
CGTAAAAGATTTTCGGACAACACGTCCAAAGATGTTGAAGATTTAACCAA
AAATTGGCAAGAAGTTCTCGGCAATCCTCCAAACCGCTCTAATGTAAAAG
ATTGGATTAATTTTCACAAGAAAAAATGGGCGTATCAAGCCAAACAGAGA
GTAGCTGGAATGCATGGTAAAAATAAAAAAGTTAAAGCAGGGCAGGTGTT
AAGTAATGCAGGCTCAACTATTGGTGCATTTTTGCGTAAAACCCAAAAAT
CTCTTCTTGATTCAATTTGGCAAATAATTCATATTGTTGAGACGGGTAAT
CCTGGCTTATTTAGACTTTGGGCACTTATTGGAAATGACTTACATCAAAT
TAAATTAATCATACCACGGATCTTTTATGTTAACCAAAGAATAACTAAAM
AAGATGATAGCAAGGAGAATACAATGCGTAGAAGAATACAAAAAACACTG
CCTCGATCACATCCTTCAATGAACTTATATGAATACTCTGTGCCGGAACA
TCTTTTTCGAGAACATTCGTCAGATTTAGTGACAGATTTGTCAACTCCGG
ATGTTGAAGGAATTTATGAGACTCAGATTCCTCTTGAATTTCGGGTATTA
GTAGAATTAGGTATGATATAGTTTTACGAATACATATATGTTTACTAATG
TATACGAATACTTATGTACTTTTCTTGATTCAAATGATGATAGGTTGTGT
CGTTGAGGTGGATAAGAAAATTGNCAAATTGGAGATACAGACACTTTTGA
GTTGGGATGGCTCAATTTTAAAACTCTCGCTCATAATGATTATCTTGCTG
ATAATAACTACAAGGCAATCTACTTTTATTATCACAAAGTTGGAAATAAG
GCAATTTATGGAGTTTTCATTCCTGTTTCGAAAAAAGCTCATGTCTTTGT
CTCAGATACTGTACGATCAAACCAATTGCCAAATCTTAATTTATTATACA
ATGCTGAAAGAACTGCTGTTATGCAAAATGAGACACTTAAAGATGTTCCT
GAGTCAGATTATAATTTCGAAGTTCGTATTGAAACAGATGTTCGACAAAT
CAACCGTCAAATAACAAAAATTTTGCAAGGATATCGGGATGAGAAAAGAG
GACCTACTATTATTTTGGCTCAGTCAATTGCTGACTTCCAAATGCTTTCT
TCAGTTATACCCACATTTGTAGAATTTCCTATTGTGCCATTACATGTATC
AGATCATGACAATCTTTATAATGTCTTAGACTGGCAAAGAGTTGGTGCAA
GACATATGATACGACATTTTTTTAAGTCTAACGCATATTTTATGGTAAGA
TAGTTTTACTATGCATAATAAAAAATATAATGTATCTTTTGTCCAAGGCT
ACATTGGAACAATGTCGATATTTTCATGTTCCTATTGGGAATATCCCAAA
AGACAACACTGCTTTTGGTGCTGATTTATTTTACGCTAGACATTTGAAAA
AACAGAATTTCGTTTTATGGTGTTCTCCAACAGAGAAACCGGATTTAGGA
GGAAAAGAGGCAGATGATAGTCGTTTACTTACTGAAGCAGAGGACTCCTG
TTTGATGACTACTGTGAACAATCCCGGTGCTTACCGTACTGTTTGTGTTG
AAATTGAAATTGATGCTCTTGCTGTGAGTGCATTACTTCAAGCTCATAAT
ATACATGACATGGAGGGTACATCAGGATCAATTGCTTTTGATACTATGCC
TCAAGCGTCTCTTGAAGAAATGTTGGGAGGTACGGCATCAAACCTTTGTA
GTTATGATGAAACTGCTTTAGTGAGCGGAGCTTTTCGTGTTCTTCGGACA
ATGGTGCATGTTTGGCTAAAAGAAGTCACTCAATACCGAAATGTATTTGC
TGATTATCAAATAATTCATTTCTATAGATGGCTTCGCTCCCCAAATTCTC
TTCTATATGACCCTGCCCTTAGAAAGACTCTACAAAACTTGATGAAAAAA
ATGTTTATGCAGTTAGTAGCTGAATTCAAGAGATTAGGTGCAATTGTCAT
TTTTGGAGATTTTAATAGGCTCATTATATGTACCAAAAAAAGAAATTTCA
AAGACGCATTGGCGTATGTTGAATATGTTACCAATACTATTCATGAGAAA
GAGATTTTTAATTCTATCGATATGAAATTCACTAAAGTACGTATAAAGTT
TATATATGCTCGGTTAGATTTATATATATTTATATTTTCAGGCGTGGGAC
TATTTGTTATGGTGTGATCCATCTAATTACGGAGGAGTAAAGAGTTTGAG
TCCTAGAAATCTTACAGAAAAGGAACTTGATGTGCAAGATGAGGAAGACA
CTGAAGAAGGTTTTGTGGAAAAAGATTTTAATGAAGATGATGATGAACCT
GAACTTGACATGTCATGGAACATAGCTTCTTATTTKCCTGATGCAGGGGC
CTGCCATAAGAATTTTAATACGGTTATTGCAGGTTTTATTTCATCTATGT
ATCAGTTCATGGTGTCTGAGGCTGAACGTGTAGCTCCGGGTTGTACTCCT
GTTAGGCGCAAATTTAATCCTAGTCAAAGTCAACCTACTCCTAGAAGGAA
AAATAATTCAAAATCCCAAGGAAGTGTTGAAGAAAATATTACAGATATCG
ATTCATTTGCTCAGGATTTGGTATCTGGAGAATTAGCTCAAAGACTTTAT
TCCGTAACTCAAAAAATCCATAAAAAACTTCCCGAACATAAAGGAAATGA
TACTTATAATGTTTTCCCTGTTCTTCCTGGATCTCATTTAAAGCTAACAA
ATCCAGCTCTTGAATTTGTCAAAGCTTTGGTCAAAGTTCTTTCTTTAGAT
TATTCAATTACGGATCATGTTCACAAATTAAGGAGAGATCTTTTAAAACT
GATAGGAATAGGAGAATTTAGCGTTGCAGCAGAATGGAAGGATCCATGTA
TATCATTTGTTTTACCCGAGGTAAGTTACTTTTTTTTTTAAATTTAATGT
AAATGTATATACATATGTTAATTTATCATAGGTCATATGTAAGCAATGCA
ATCACTGTCGCGACATTGACTTATGTAAAGATCCTCATCGAGGTGAACAA
AATGGAATTCCTGTTTGGCTATGTCCATCCATTCAGTGTGAAACACCCTA
CGATACATACGAATTGGAAGCACTTCTTCTTGATGTTGTTCGACGAAAAA
CTATGGGCTGGGTTCTTCAGGATTTAAAATGTATCAAGTGTTCTGGTATT
AAAGAAGCCAATATGACTAAATATTGTTTATGTGCTGGGGCTTTTGAAAC
TATTTCACGGTTTCATGATCTTCAGCAGCTACTTATGACTTTCAAAAGTA
TTGCTGAGCATTATAATATGCCCATGTTGGAGGAATTGGTTACCTGGACA
CTAGAAATGAATATAAATACTTAA

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