EMLSAT00000012291, EMLSAT00000012291-708138 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012291
Unique NameEMLSAT00000012291-708138
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s898supercontigLSalAtl2s898:43780..47597 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012291 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012291EMLSAG00000012291-695057Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055186EMLSAE00000055186-764114Lepeophtheirus salmonisexon
EMLSAE00000055187EMLSAE00000055187-764115Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770432auto770432Lepeophtheirus salmonispolypeptide
EMLSAP00000012291EMLSAP00000012291Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012291

>EMLSAP00000012291 ID=EMLSAP00000012291|Name=EMLSAP00000012291|organism=Lepeophtheirus salmonis|type=polypeptide|length=152bp
MAQDWLTANMPFWNKNICPPQSPDLNPLDYSVWWQIEKKACATRHPNLDS
LKVSVNEQWAAMEDHYIINVCKAFSILCIEKVLPTEIQLIIGSMFSGKPT
LFNRHHEGYQMTKYKYFNIKYAKNYLYDINPRAPHDEIVLDAVSSQHISG
YT
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mRNA from alignment at LSalAtl2s898:43780..47597-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012291-708138 ID=EMLSAT00000012291-708138|Name=EMLSAT00000012291|organism=Lepeophtheirus salmonis|type=mRNA|length=3818bp|location=Sequence derived from alignment at LSalAtl2s898:43780..47597- (Lepeophtheirus salmonis)
ATGGCTCAGGATTGGCTCACTGCCAACATGCCATTTTGGAACAAAAACAT
TTGCCCACCTCAATCACCTGATTTGAATCCCCTTGACTACAGTGTGTGGT
GGCAAATTGAGAAGAAGGCCTGTGCTACCCGTCACCCGAATTTGGACTCA
TTGAAGGTCAGTGTCAATGAGCAATGGGCAGCCATGGAAGACCATTACAT
CATCAATGTGTGCAAGGCCTTCTCTAGTATATAATTCTCAAAAAAAAAAA
TACGTCATACGAATTTTATTACACATTTAATTATTTGCCACAATTAGTTC
ACGTATTTATGCAACTACCGGTATGTAGTGCGACTATATTTCAATTTCAA
TAAAATGATAATTTGTTACAACAGCGTTTCATATCCATTAAAAAAATTAA
GTTGATTTCTTGTAAAAAGTGTTTTTTGAATATAGTTTGTTTAAATCAAA
TATGATAAATATTGATTAAATTTATATAATGCTGATAGACAACTGGCCTT
CGGTATAGCAAGTAGCTTATGTTCAGCGCAGATGTAAAAATGACAAGTTA
AATAATTATATTAATGATAAATTTAATATAAATTAATAAAAGTTTAAAGG
AATTAAAATAATATAAACATAATTGACGAGCAAAGTAGGAAGGTTCAGCT
AGTATTAAATATATGCTCATTGCATTTTTTGGCGAAATGTTTGTGTAGTG
TAGCTTACGTTTATTTCTGTCTCATTCCATGGAACCATGGTGTAAAAAAT
TTACCATCAATTTATTACTGCTGCAGAACCTGGTTATATGTCAGTACTTT
AAGCTGATCAAGAATTGTATAGTTAAGTACTGCCAAAATAGAAACCAGTT
TATTTGTAGGAGATTCAAAATATTTAGATAAATCACCATTATTAAGAAAA
AATAATAAACCCTTGCTAGTTCAAATCTACCAACTGAGATCACATGTGGT
TTCAGATTGCCTTCAAATTCCCACAAAAATTCCTATTTTGTGGATCACCA
TGAGTAGTAATTAAACTCCATGGTTTATAGAGCCTAATTATTAAAACTTA
GATCCTAGCACAAGATGACTTGGCAATGTTTTTACTGCTTACTTTTATTG
AATTGTTTTCATTTATATTAATTGCCGGGCTAGTAATAACTGCCCATCAA
CCATCACCTTACCTTTTTCAATTCAATTTATCTGCCTGTCGTCTCCAAAT
ATGGAAAATGTACATTTTGTTTTATTTTTTCGTCTTATTCAAATCATACT
TGGTTTGTCAAATGATTTATTATTGAGAAATACAAAACTGAAATTTCAAA
TTTGTAACTCAATCCAGATCTGAGTTCTGAGCTCCTTTTCATGATGAATT
TGATCAAAAACGTATGGATTGTAGTTCATAAACCACTCAATATAGCTATT
GGATTATCAGATATATATGAAATAATTTAAGATTGTTACTAATAAAGATC
TTAAATTTATCTTTTCACAGACTATATTTTCTAAATATAACTACATATTT
TTTATTTATATGGCAATTTCTGTTTTTTTTTTTGTTACTTTACCGGCTTA
TATAAGGGATTGTTGTATTTCACTAAATTGGATCCATTATTCGACCATAG
ATCTGGATGAATAACACACTCTATTGGAGTTCCGGTCAAAAAAGTCATAG
GTAGAGTAATCAATCCTAAGAAAATTATGTACTTCAAAATATTGTTATGA
AAAATCTTATAAAATACAATCATAAATAGTAGGGTCGAATTTTGTCAAAG
AAACTAAATAATCAAAAGCTGTTTGCATACTGAATAATGTCAAAACATTT
TATTTAATCGAAACAACCGTCTTTAATCGTTTAGTCGTCAACATAAAAAC
AATCTTGAACAAAATTCAAGAAACAAAGAAAATTCTAATGTATTGTTTGG
CATCGTATATATATATACAGACCAATGTTTCATTGACATATTTGAGACAA
TGTTATGGTTTGTATTCATATTTGTGGGAGTAGCTTAGAGATATAATAGT
TTTAGCTATAGTTTAAAACCTTTTGTTGATTTAAGATACTTAACACATGG
GCTGAAAAGTCCTAGACTTAAGGAAGAAAAGACGTTTTTTTTCCCGTACA
AAATTTTTTAAAAAAAATTATTATTATTAATGATTGTTTAAATTTTTTTA
TTGCCTTTTATGAAGCGGAGTCTTCAGAGCACTTTACCATCACTAGATTA
AATTTTATTTTGCCAAATTTAAAATTAAAACACAAAATTGTTTTTGATCC
ATTGTTTCGTAAATAACAAAAGTAGCGTAACTGAAAATGAGGTCAAAAAA
GCGCCAGCTAAGTGTGAAAACCCTAACTTTTCAGCCCATGTGTTATATTA
GCTGGAAATTTCAAATAAAATCTACCTTATTCATTTCTTGTGAGTATCAA
TTTTGGATACTTTAAATGCAATTTGCGGGAACCAAGGGGTTGATTAAAAT
GATTTCTTGATAGAGATTGACAATAATTCGTCGAAGAGTACAACTGTAAT
TCATACTTTATTTTGAGAAAAATCGTTCACTTTTGTGTTGACGGACCACA
AATATTTTTTGTTAATCTATTAACCCTTCCAAAATATTTCGTTTTCTTCA
ATAATGGTACATTTGATCATTATATTCCTCATATGTATTGATTGGTAAAA
GGTCTTCTCAAATCATTTTTAATATGACTTTTTTTATATTTCGCCTTTGA
AGAAGTTTTCAAGTTTGAAGACACTTCTGTATTAGTCACTTTAGACTTTA
TTGGCTGMCAAGAGCTATATTGGACTTAGAAAAATAAGGGATACGACCTA
ATTATGTCTCTAAAATAAATATTTATCCATCAAACTAATCTAAAGCTAAA
TTAGATCACAAGTTGACATAAATAGGTATATTTTTATATTGCTATTTTTT
GAGAAATGTAATAAAAAAGGATGTGTATTCTTCACACGTCTTTTTGATTA
AAAATATGTATCAATTAAAAGTAATTGAAGTAGTTCATTCAAACACGTCT
ACGGAAAATTGTCCTAATAGAAAACTGCCTGTCATTTATTAAAAATTTCA
GATTGGATAATGCTTCAATATATATATGTAAACATCGACTATTTATTTTC
AAAATGATTCAACACTTTTGTGTTGAATTTGAAAATATAAAATAGTAGTG
CTGAGACTCCGTCCAAGACCGAAATATTTTTTCGGTTCGGTCTTAAGTGA
CTTTTTCTAGACCGATTTGGACTTATATTTCGATCTAGACTTGATTTTTC
TTTAAAAACGGTTCCGACGGAATTTCTTTAAAGGACCGAAATAGTTTGGT
TCACTAAAAGTAATAACAGACTTAGACCGGTTTAAGATTTTCAGACCCAA
ACCCAATACTAAAAAATATATCAAAAATGTTTTGTCCCTTTGTTANNNNN
NNTATTCAATCTACCTGCAACTTGAATATATCCTAATATTTTTCTCTGAT
ATACATTTTAAACATTATAATTGAATTAACTTAAATAAATCTTAGTCAAA
TAGAGCAGTGTTTTTGAAATGGGGTATATAATTTAAATTCAGTTTTAATG
TGCAAGACATCATTGATATTTGAAAAGTATCCCAGTTCTGTGTATCGAAA
AAGTGCTTCCGACTGAGATTCAGTTGATTATTGGATCCATGTTCTCTGGA
AAGCCCACATTATTTAACCGACATCATGAAGGCTATCAAATGACTAAATA
CAAATATTTCAATATCAAATATGCCAAAAATTATCTCTATGATATCAATC
CCAGAGCCCCCCATGACGAAATAGTTCTAGATGCTGTGTCTTCTCAACAT
ATATCTGGATACACTTAA
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