EMLSAT00000012333, EMLSAT00000012333-708180 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012333
Unique NameEMLSAT00000012333-708180
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s8supercontigLSalAtl2s8:1769695..1770793 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012333 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012333EMLSAG00000012333-695099Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055350EMLSAE00000055350-764278Lepeophtheirus salmonisexon
EMLSAE00000055351EMLSAE00000055351-764279Lepeophtheirus salmonisexon
EMLSAE00000055352EMLSAE00000055352-764280Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780875auto780875Lepeophtheirus salmonispolypeptide
EMLSAP00000012333EMLSAP00000012333Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012333

>EMLSAP00000012333 ID=EMLSAP00000012333|Name=EMLSAP00000012333|organism=Lepeophtheirus salmonis|type=polypeptide|length=323bp
MFEDESEYLXLEXLDDKRKEDKPQNLSRNIKGALRSCNNKGPESPGKSRK
RKFPGPAGILLESSPSSKIRFENSSDEIKDDYETLKENNQGTTTENENSD
DLCGDIWMKMLSDYDTSCDEIDSYSISKLKGQSLPGSSKKTPILFVVIKS
IDTAAPDPTCSLVDPSGSINGMIHRAVMEKYRVHLSIGSILVLRNVAVLM
TLRNHYVNVTLNNLLSIYQSGASPRRIIVSTSHHPLSISQIIKESKLSSR
IKDVNQPLSKKVVDNPFINPTSKIPSSHTSNXFQFKKSGASPSKFHAQXP
PIDSSESDILLEGLDEDSLFGDF
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mRNA from alignment at LSalAtl2s8:1769695..1770793-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012333-708180 ID=EMLSAT00000012333-708180|Name=EMLSAT00000012333|organism=Lepeophtheirus salmonis|type=mRNA|length=1099bp|location=Sequence derived from alignment at LSalAtl2s8:1769695..1770793- (Lepeophtheirus salmonis)
ATGTTTGAGGATGAGAGTGAATACTTGGYTTTGGAGGYTTTGGATGACAA
AAGAAAGGAGGATAAGCCCCAGAATTTATCCAGGAACATAAAAGGAGCTC
TACGAAGTTGTAATAATAAGGGGCCCGAAAGTCCAGGGAAATCCAGGAAG
AGGAAATTTCCGGGKCCTGCGGGNATCCTTTTGGAGTCGTCGCCATCCTC
TAAAATTAGGTAAAGCATTTGATCTATTTAGTAATGAACTCATACGTGAG
GTTTTAATCGTTATTTTTTTAAGATTTGAGAATAGCTCTGATGAAATCAA
GGATGACTACGAGACTCTCAAGGAAAACAACCAAGGGACTACGACTGAGA
ATGAGAACTCTGACGACTTATGTGGAGACATTTGGATGAAAATGTTAAGT
GACTACGATACCTCCTGCGACGAAATAGATTCATACAGCATATCCAAACT
AAAAGGACAATCCCTTCCCGGATCGAGTAAAAAAACTCCCATCCTTTTCG
TAGTCATCAAATCTATTGACACAGCTGCCCCTGATCCCACATGCTCCCTT
GTAGATCCCTCAGGATCCATCAATGGCATGATTCATCGGGCTGTTATGGA
GAAGTACAGAGTACATCTCTCCATTGGTAAATATAATAGATACTTGATTA
ATCTAACCCCTCGAGTCTCCAAACTTTTTCTTTTTCCAGGTTCTATTTTA
GTGTTAAGAAACGTTGCCGTTCTTATGACCCTAAGAAATCATTATGTCAA
TGTAACTCTTAACAATCTACTGAGCATCTACCAGTCAGGGGCCTCTCCAC
GACGTATCATTGTTTCTACAAGCCATCATCCACTTAGCATTTCTCAAATT
ATAAAAGAGTCAAAATTAAGTTCTCGTATCAAGGATGTAAATCAACCTCT
TTCGAAGAAAGTAGTGGATAATCCTTTTATCAATCCAACATCTAAAATTC
CATCCTCACATACCTCAAATKCCTTTCAGTTCAAGAAATCCGGAGCCTCT
CCTTCTAAATTTCATGCTCAARCRCCGCCTATCGATAGTAGTGAAAGTGA
TATACTTTTAGAAGGGCTGGACGAAGATTCTTTGTTTGGAGACTTTTAA
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